RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 CLTCQ00610 1675 aaKnown RBP12.71□□□□□ -0.37
SPIDR-225ENST00000524141 TERF1P54274 439 aa12.71□□□□□ -0.38
SPIDR-225ENST00000524141 SRPK2P78362 688 aaKnown RBP12.71□□□□□ -0.38
SPIDR-225ENST00000524141 GAS2L2Q8NHY3 880 aa12.71□□□□□ -0.38
SPIDR-225ENST00000524141 FYB1O15117 783 aa12.7□□□□□ -0.38
SPIDR-225ENST00000524141 ZNF445P59923 1031 aa12.7□□□□□ -0.38
SPIDR-225ENST00000524141 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.7□□□□□ -0.38
SPIDR-225ENST00000524141 ABCC3O15438 1527 aa12.7□□□□□ -0.38
SPIDR-225ENST00000524141 PDCL3Q9H2J4 239 aa12.7□□□□□ -0.38
SPIDR-225ENST00000524141 FOXD4L1Q9NU39 408 aa12.7□□□□□ -0.38
SPIDR-225ENST00000524141 FAM135BQ49AJ0 1406 aa12.7□□□□□ -0.38
SPIDR-225ENST00000524141 KIF20BQ96Q89 1820 aa12.7□□□□□ -0.38
SPIDR-225ENST00000524141 FRMPD1Q5SYB0 1578 aa12.7□□□□□ -0.38
SPIDR-225ENST00000524141 ABCC4O15439 1325 aa12.69□□□□□ -0.38
SPIDR-225ENST00000524141 KIAA1211Q6ZU35 1233 aa12.69□□□□□ -0.38
SPIDR-225ENST00000524141 OFD1O75665 1012 aa12.69□□□□□ -0.38
SPIDR-225ENST00000524141 MRPL50Q8N5N7 158 aaKnown RBP12.69□□□□□ -0.38
SPIDR-225ENST00000524141 RBM42Q9BTD8 480 aaKnown RBP12.68□□□□□ -0.38
SPIDR-225ENST00000524141 KIF24Q5T7B8 1368 aa12.68□□□□□ -0.38
SPIDR-225ENST00000524141 MLH3Q9UHC1 1453 aa12.68□□□□□ -0.38
SPIDR-225ENST00000524141 HDGFL2Q7Z4V5 671 aaPredicted RBP12.68□□□□□ -0.38
SPIDR-225ENST00000524141 CWC22Q9HCG8 908 aaKnown RBP12.68□□□□□ -0.38
SPIDR-225ENST00000524141 CD163L1Q9NR16 1453 aa12.67□□□□□ -0.38
SPIDR-225ENST00000524141 VAMP4O75379 141 aa12.67□□□□□ -0.38
SPIDR-225ENST00000524141 GNAI1P63096 354 aa12.67□□□□□ -0.38
SPIDR-225ENST00000524141 ZMYND15Q9H091 742 aa12.67□□□□□ -0.38
SPIDR-225ENST00000524141 IFT57Q9NWB7 429 aa12.67□□□□□ -0.38
SPIDR-225ENST00000524141 ASXL2Q76L83 1435 aa12.67□□□□□ -0.38
SPIDR-225ENST00000524141 AK9Q5TCS8 1911 aa12.67□□□□□ -0.38
SPIDR-225ENST00000524141 NFE2L2Q16236 605 aa12.66□□□□□ -0.38
SPIDR-225ENST00000524141 GGT6Q6P531 493 aa12.66□□□□□ -0.38
SPIDR-225ENST00000524141 SIRT2Q8IXJ6 389 aa12.66□□□□□ -0.38
SPIDR-225ENST00000524141 API5Q9BZZ5 524 aaKnown RBP12.66□□□□□ -0.38
SPIDR-225ENST00000524141 C1orf115Q9H7X2 142 aa12.66□□□□□ -0.38
SPIDR-225ENST00000524141 PRKAR2BP31323 418 aa12.66□□□□□ -0.38
SPIDR-225ENST00000524141 SAFB2Q14151 953 aaKnown RBP eCLIP12.66□□□□□ -0.382e-6■■■■□ 22
SPIDR-225ENST00000524141 POGZQ7Z3K3 1410 aa12.66□□□□□ -0.38
SPIDR-225ENST00000524141 SIGLEC1Q9BZZ2 1709 aa12.66□□□□□ -0.38
SPIDR-225ENST00000524141 CYP2E1P05181 493 aaPredicted RBP12.65□□□□□ -0.38
SPIDR-225ENST00000524141 PTPRMP28827 1452 aa12.65□□□□□ -0.38
SPIDR-225ENST00000524141 INTS3Q68E01 1043 aaKnown RBP12.65□□□□□ -0.38
SPIDR-225ENST00000524141 MCTP1Q6DN14 999 aa12.65□□□□□ -0.38
SPIDR-225ENST00000524141 ZSCAN23Q3MJ62 389 aa12.65□□□□□ -0.38
SPIDR-225ENST00000524141 CASC1Q6TDU7 716 aa12.65□□□□□ -0.38
SPIDR-225ENST00000524141 ST18O60284 1047 aa12.64□□□□□ -0.39
SPIDR-225ENST00000524141 GSPT1P15170 499 aaKnown RBP12.64□□□□□ -0.39
SPIDR-225ENST00000524141 YEATS2Q9ULM3 1422 aa12.64□□□□□ -0.39
SPIDR-225ENST00000524141 TTC22Q5TAA0 569 aa12.64□□□□□ -0.39
SPIDR-225ENST00000524141 CAVIN1Q6NZI2 390 aaKnown RBP12.64□□□□□ -0.39
SPIDR-225ENST00000524141 PLEKHM2Q8IWE5 1019 aa12.64□□□□□ -0.39
SPIDR-225ENST00000524141 LMBRD1Q9NUN5 540 aa12.64□□□□□ -0.39
SPIDR-225ENST00000524141 NOL7Q9UMY1 257 aaKnown RBP12.64□□□□□ -0.39
SPIDR-225ENST00000524141 LMOD3Q0VAK6 560 aa12.64□□□□□ -0.39
SPIDR-225ENST00000524141 PDLIM2Q96JY6 352 aa12.64□□□□□ -0.39
SPIDR-225ENST00000524141 MAP7D2Q96T17 732 aa12.64□□□□□ -0.39
SPIDR-225ENST00000524141 ZNF500O60304 480 aaPredicted RBP12.63□□□□□ -0.39
SPIDR-225ENST00000524141 USP26Q9BXU7 913 aa12.63□□□□□ -0.39
SPIDR-225ENST00000524141 MCM5P33992 734 aa12.63□□□□□ -0.39
SPIDR-225ENST00000524141 DCTPP1Q9H773 170 aa12.63□□□□□ -0.39
SPIDR-225ENST00000524141 ZNF853P0CG23 659 aa12.62□□□□□ -0.39
SPIDR-225ENST00000524141 NCLP19338 710 aaKnown RBP12.62□□□□□ -0.39
SPIDR-225ENST00000524141 TWISTNBQ3B726 338 aaPredicted RBP12.62□□□□□ -0.39
SPIDR-225ENST00000524141 NUTM2DQ5VT03 806 aaPredicted RBP12.62□□□□□ -0.39
SPIDR-225ENST00000524141 STK26Q9P289 416 aa12.62□□□□□ -0.39
SPIDR-225ENST00000524141 TSPYL6Q8N831 410 aa12.61□□□□□ -0.39
SPIDR-225ENST00000524141 MBIPQ9NS73 344 aa12.61□□□□□ -0.39
SPIDR-225ENST00000524141 KNDC1Q76NI1 1749 aa12.61□□□□□ -0.39
SPIDR-225ENST00000524141 MINK1Q8N4C8 1332 aaPredicted RBP12.61□□□□□ -0.39
SPIDR-225ENST00000524141 YTHDC2Q9H6S0 1430 aaKnown RBP12.61□□□□□ -0.39
SPIDR-225ENST00000524141 REC8O95072 547 aa12.61□□□□□ -0.39
SPIDR-225ENST00000524141 HAP1P54257 671 aaPredicted RBP12.61□□□□□ -0.39
SPIDR-225ENST00000524141 CSPP1Q1MSJ5 1256 aa12.61□□□□□ -0.39
SPIDR-225ENST00000524141 SLC52A1Q9NWF4 448 aa12.61□□□□□ -0.39
SPIDR-225ENST00000524141 PRAM1Q96QH2 718 aa12.6□□□□□ -0.39
SPIDR-225ENST00000524141 MAP2P11137 1827 aaKnown RBP12.6□□□□□ -0.39
SPIDR-225ENST00000524141 POLKQ9UBT6 870 aa12.6□□□□□ -0.39
SPIDR-225ENST00000524141 ATP7BP35670 1465 aa12.6□□□□□ -0.39
SPIDR-225ENST00000524141 RBSNQ9H1K0 784 aa12.59□□□□□ -0.39
SPIDR-225ENST00000524141 ARHGEF40Q8TER5 1519 aa12.59□□□□□ -0.39
SPIDR-225ENST00000524141 RPAP2Q8IXW5 612 aaPredicted RBP12.59□□□□□ -0.39
SPIDR-225ENST00000524141 PHACTR3Q96KR7 559 aa12.59□□□□□ -0.39
SPIDR-225ENST00000524141 CDK12Q9NYV4 1490 aaPredicted RBP12.59□□□□□ -0.39
SPIDR-225ENST00000524141 MBD3O95983 291 aa12.58□□□□□ -0.39
SPIDR-225ENST00000524141 PRIM1P49642 420 aaKnown RBP12.58□□□□□ -0.39
SPIDR-225ENST00000524141 MTERF4Q7Z6M4 381 aaKnown RBP12.58□□□□□ -0.39
SPIDR-225ENST00000524141 ANKRD44Q8N8A2 993 aa12.58□□□□□ -0.39
SPIDR-225ENST00000524141 ZKSCAN5Q9Y2L8 839 aa12.58□□□□□ -0.39
SPIDR-225ENST00000524141 DLG5Q8TDM6 1919 aa12.58□□□□□ -0.4
SPIDR-225ENST00000524141 LRSAM1Q6UWE0 723 aa12.58□□□□□ -0.4
SPIDR-225ENST00000524141 THUMPD2Q9BTF0 503 aaKnown RBP12.58□□□□□ -0.4
SPIDR-225ENST00000524141 CCDC39Q9UFE4 941 aa12.58□□□□□ -0.4
SPIDR-225ENST00000524141 MYO5BQ9ULV0 1848 aa12.58□□□□□ -0.4
SPIDR-225ENST00000524141 ELL2O00472 640 aaPredicted RBP12.58□□□□□ -0.4
SPIDR-225ENST00000524141 PRPF40AO75400 957 aaKnown RBP12.58□□□□□ -0.4
SPIDR-225ENST00000524141 CPSF1Q10570 1443 aaKnown RBP12.58□□□□□ -0.4
SPIDR-225ENST00000524141 RIMS2Q9UQ26 1411 aa12.58□□□□□ -0.4
SPIDR-225ENST00000524141 ATP10DQ9P241 1426 aa12.57□□□□□ -0.4
SPIDR-225ENST00000524141 HMOX1P09601 288 aa12.57□□□□□ -0.4
SPIDR-225ENST00000524141 IDI1Q13907 227 aa12.57□□□□□ -0.4
SPIDR-225ENST00000524141 CDK19Q9BWU1 502 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms