RNA–Protein interactions for RNA: ENST00000524074.1

PFDN1-207, Transcript of prefoldin subunit 1, humanhuman

TSL 5 BASIC

Gene PFDN1, Length 395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-207ENST00000524074 EGFL7Q9UHF1 273 aa13.63□□□□□ -0.23
PFDN1-207ENST00000524074 CHIC2Q9UKJ5 165 aa13.63□□□□□ -0.23
PFDN1-207ENST00000524074 AXIN2Q9Y2T1 843 aa13.63□□□□□ -0.23
PFDN1-207ENST00000524074 PRMT3O60678 531 aa13.62□□□□□ -0.23
PFDN1-207ENST00000524074 CCNYL3P0C7X3 344 aa13.62□□□□□ -0.23
PFDN1-207ENST00000524074 TRAF7Q6Q0C0 670 aa13.62□□□□□ -0.23
PFDN1-207ENST00000524074 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.62□□□□□ -0.23
PFDN1-207ENST00000524074 HMGB1P09429 215 aaKnown RBP13.61□□□□□ -0.23
PFDN1-207ENST00000524074 H3BRB1 525 aa13.6□□□□□ -0.23
PFDN1-207ENST00000524074 NR1I2O75469 434 aa13.6□□□□□ -0.23
PFDN1-207ENST00000524074 PBX2P40425 430 aa13.6□□□□□ -0.23
PFDN1-207ENST00000524074 POTEEQ6S8J3 1075 aa13.6□□□□□ -0.23
PFDN1-207ENST00000524074 ADAM32Q8TC27 787 aa13.6□□□□□ -0.23
PFDN1-207ENST00000524074 OCSTAMPQ9BR26 566 aa13.6□□□□□ -0.23
PFDN1-207ENST00000524074 ARHGAP9Q9BRR9 750 aa13.6□□□□□ -0.23
PFDN1-207ENST00000524074 TUT1Q9H6E5 874 aaKnown RBP13.6□□□□□ -0.23
PFDN1-207ENST00000524074 DOLKQ9UPQ8 538 aa13.6□□□□□ -0.23
PFDN1-207ENST00000524074 POTEB2H3BUK9 544 aa13.59□□□□□ -0.23
PFDN1-207ENST00000524074 SEC13P55735 322 aa13.59□□□□□ -0.23
PFDN1-207ENST00000524074 SCUBE3Q8IX30 993 aa13.59□□□□□ -0.23
PFDN1-207ENST00000524074 SIX5Q8N196 739 aa13.59□□□□□ -0.23
PFDN1-207ENST00000524074 MRPL50Q8N5N7 158 aaKnown RBP13.59□□□□□ -0.23
PFDN1-207ENST00000524074 THAP11Q96EK4 314 aa13.59□□□□□ -0.23
PFDN1-207ENST00000524074 EVA1BQ9NVM1 165 aa13.59□□□□□ -0.23
PFDN1-207ENST00000524074 CXXC1Q9P0U4 656 aaPredicted RBP13.59□□□□□ -0.23
PFDN1-207ENST00000524074 GLYCTKQ8IVS8 523 aa13.58□□□□□ -0.24
PFDN1-207ENST00000524074 NUDT12Q9BQG2 462 aa13.58□□□□□ -0.24
PFDN1-207ENST00000524074 ERBB3P21860 1342 aa13.58□□□□□ -0.24
PFDN1-207ENST00000524074 ZNF211Q13398 564 aaPredicted RBP13.57□□□□□ -0.24
PFDN1-207ENST00000524074 VARS2Q5ST30 1063 aaKnown RBP13.57□□□□□ -0.24
PFDN1-207ENST00000524074 ZBTB33Q86T24 672 aa13.57□□□□□ -0.24
PFDN1-207ENST00000524074 BHMG1C9JSJ3 638 aaPredicted RBP13.56□□□□□ -0.24
PFDN1-207ENST00000524074 GTF2IP78347 998 aa13.56□□□□□ -0.24
PFDN1-207ENST00000524074 OXLD1Q5BKU9 147 aa13.56□□□□□ -0.24
PFDN1-207ENST00000524074 TAS1R3Q7RTX0 852 aa13.56□□□□□ -0.24
PFDN1-207ENST00000524074 DZIP3Q86Y13 1208 aaKnown RBP13.56□□□□□ -0.24
PFDN1-207ENST00000524074 PRIMPOLQ96LW4 560 aa13.56□□□□□ -0.24
PFDN1-207ENST00000524074 KIAA1024Q9UPX6 916 aa13.56□□□□□ -0.24
PFDN1-207ENST00000524074 PCDHB3Q9Y5E6 796 aa13.56□□□□□ -0.24
PFDN1-207ENST00000524074 BCL11AQ9H165 835 aa13.55□□□□□ -0.24
PFDN1-207ENST00000524074 ICMTO60725 284 aa13.54□□□□□ -0.24
PFDN1-207ENST00000524074 VAMP1P23763 118 aa13.54□□□□□ -0.24
PFDN1-207ENST00000524074 MAPK1P28482 360 aa13.54□□□□□ -0.24
PFDN1-207ENST00000524074 OCLNQ16625 522 aa13.54□□□□□ -0.24
PFDN1-207ENST00000524074 TSGA10IPQ3SY00 556 aa13.54□□□□□ -0.24
PFDN1-207ENST00000524074 ANO2Q9NQ90 1003 aa13.54□□□□□ -0.24
PFDN1-207ENST00000524074 DKK1O94907 266 aa13.53□□□□□ -0.24
PFDN1-207ENST00000524074 PPP4CP60510 307 aa13.53□□□□□ -0.24
PFDN1-207ENST00000524074 MSS51Q4VC12 460 aa13.53□□□□□ -0.24
PFDN1-207ENST00000524074 CCDC102BQ68D86 513 aa13.53□□□□□ -0.24
PFDN1-207ENST00000524074 ZBTB7BO15156 539 aaPredicted RBP13.52□□□□□ -0.25
PFDN1-207ENST00000524074 DXOO77932 396 aaKnown RBP13.52□□□□□ -0.25
PFDN1-207ENST00000524074 PSME1Q06323 249 aa13.52□□□□□ -0.25
PFDN1-207ENST00000524074 TPCN2Q8NHX9 752 aa13.52□□□□□ -0.25
PFDN1-207ENST00000524074 CCDC85AQ96PX6 553 aaPredicted RBP13.52□□□□□ -0.25
PFDN1-207ENST00000524074 C21orf2O43822 256 aa13.51□□□□□ -0.25
PFDN1-207ENST00000524074 HSP90B1P14625 803 aaKnown RBP13.51□□□□□ -0.25
PFDN1-207ENST00000524074 APLP1P51693 650 aa13.5□□□□□ -0.25
PFDN1-207ENST00000524074 ZSCAN29Q8IWY8 852 aaPredicted RBP13.5□□□□□ -0.25
PFDN1-207ENST00000524074 ASB16Q96NS5 453 aa13.5□□□□□ -0.25
PFDN1-207ENST00000524074 DCTN4Q9UJW0 460 aa13.5□□□□□ -0.25
PFDN1-207ENST00000524074 SFI1A8K8P3 1242 aa13.49□□□□□ -0.25
PFDN1-207ENST00000524074 FBXO33Q7Z6M2 555 aa13.49□□□□□ -0.25
PFDN1-207ENST00000524074 SP7Q8TDD2 431 aaPredicted RBP13.49□□□□□ -0.25
PFDN1-207ENST00000524074 C8orf37Q96NL8 207 aa13.49□□□□□ -0.25
PFDN1-207ENST00000524074 ANKK1Q8NFD2 765 aa13.48□□□□□ -0.25
PFDN1-207ENST00000524074 GTF3C2Q8WUA4 911 aaPredicted RBP13.48□□□□□ -0.25
PFDN1-207ENST00000524074 HINFPQ9BQA5 517 aa13.48□□□□□ -0.25
PFDN1-207ENST00000524074 TK2O00142 265 aa13.47□□□□□ -0.25
PFDN1-207ENST00000524074 RNF20Q5VTR2 975 aa13.47□□□□□ -0.25
PFDN1-207ENST00000524074 SH3BP5LQ7L8J4 393 aa13.47□□□□□ -0.25
PFDN1-207ENST00000524074 PUS7Q96PZ0 661 aaKnown RBP13.47□□□□□ -0.25
PFDN1-207ENST00000524074 CARD14Q9BXL6 1004 aa13.47□□□□□ -0.25
PFDN1-207ENST00000524074 HPS5Q9UPZ3 1129 aa13.47□□□□□ -0.25
PFDN1-207ENST00000524074 MMP16P51512 607 aa13.46□□□□□ -0.25
PFDN1-207ENST00000524074 SPSB2Q99619 263 aa13.46□□□□□ -0.25
PFDN1-207ENST00000524074 SF3B2Q13435 895 aaKnown RBP13.45□□□□□ -0.26
PFDN1-207ENST00000524074 SREK1Q8WXA9 508 aaKnown RBP13.45□□□□□ -0.26
PFDN1-207ENST00000524074 DRC1Q96MC2 740 aa13.45□□□□□ -0.26
PFDN1-207ENST00000524074 MKNK1Q9BUB5 465 aa13.45□□□□□ -0.26
PFDN1-207ENST00000524074 MAGEB6P1A0A0J9YX57 407 aa13.44□□□□□ -0.26
PFDN1-207ENST00000524074 GIGYF1O75420 1035 aaPredicted RBP13.44□□□□□ -0.26
PFDN1-207ENST00000524074 FKBP4Q02790 459 aaKnown RBP eCLIP13.44□□□□□ -0.26
PFDN1-207ENST00000524074 FAM160A2Q8N612 972 aaPredicted RBP13.44□□□□□ -0.26
PFDN1-207ENST00000524074 UNC93B1Q9H1C4 597 aa13.44□□□□□ -0.26
PFDN1-207ENST00000524074 SEPT3Q9UH03 358 aa13.44□□□□□ -0.26
PFDN1-207ENST00000524074 ZC3H6P61129 1189 aaKnown RBP13.43□□□□□ -0.26
PFDN1-207ENST00000524074 TAGLNQ01995 201 aaKnown RBP13.43□□□□□ -0.26
PFDN1-207ENST00000524074 COL19A1Q14993 1142 aa13.43□□□□□ -0.26
PFDN1-207ENST00000524074 PRDM9Q9NQV7 894 aa13.43□□□□□ -0.26
PFDN1-207ENST00000524074 DNMT3AQ9Y6K1 912 aaPredicted RBP13.43□□□□□ -0.26
PFDN1-207ENST00000524074 GOLGA8CPA6NN73 597 aa13.42□□□□□ -0.26
PFDN1-207ENST00000524074 LGR5O75473 907 aa13.42□□□□□ -0.26
PFDN1-207ENST00000524074 RECKO95980 971 aa13.42□□□□□ -0.26
PFDN1-207ENST00000524074 EAPPQ56P03 285 aaPredicted RBP13.42□□□□□ -0.26
PFDN1-207ENST00000524074 TSR3Q9UJK0 312 aaKnown RBP13.42□□□□□ -0.26
PFDN1-207ENST00000524074 PCDHGA11Q9Y5H2 935 aa13.42□□□□□ -0.26
PFDN1-207ENST00000524074 SOWAHBA6NEL2 793 aa13.41□□□□□ -0.26
PFDN1-207ENST00000524074 PTCD1O75127 700 aaKnown RBP13.41□□□□□ -0.26
PFDN1-207ENST00000524074 USP4Q13107 963 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms