RNA–Protein interactions for RNA: ENST00000524049.5

CCNC-218, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-218ENST00000524049 NBPF1Q3BBV0 1214 aa16.71■□□□□ 0.27
CCNC-218ENST00000524049 CABP2Q9NPB3 220 aa16.71■□□□□ 0.27
CCNC-218ENST00000524049 ZBTB7CA1YPR0 619 aa16.7■□□□□ 0.26
CCNC-218ENST00000524049 CABP1Q9NZU7 370 aa16.7■□□□□ 0.26
CCNC-218ENST00000524049 PARP4Q9UKK3 1724 aaKnown RBP16.7■□□□□ 0.26
CCNC-218ENST00000524049 BCL9O00512 1426 aa16.7■□□□□ 0.26
CCNC-218ENST00000524049 USP6P35125 1406 aa16.69■□□□□ 0.26
CCNC-218ENST00000524049 WDR17Q8IZU2 1322 aa16.69■□□□□ 0.26
CCNC-218ENST00000524049 KIAA1210Q9ULL0 1709 aa16.68■□□□□ 0.26
CCNC-218ENST00000524049 KCNH5Q8NCM2 988 aa16.68■□□□□ 0.26
CCNC-218ENST00000524049 ZNF692Q9BU19 519 aaPredicted RBP16.68■□□□□ 0.26
CCNC-218ENST00000524049 MARCH10Q8NA82 808 aaPredicted RBP16.66■□□□□ 0.26
CCNC-218ENST00000524049 CARD10Q9BWT7 1032 aa16.66■□□□□ 0.26
CCNC-218ENST00000524049 ANO8Q9HCE9 1232 aaPredicted RBP16.66■□□□□ 0.26
CCNC-218ENST00000524049 U3KPZ7 1027 aaPredicted RBP16.66■□□□□ 0.26
CCNC-218ENST00000524049 SLIT3O75094 1523 aa16.65■□□□□ 0.26
CCNC-218ENST00000524049 RGPD3A6NKT7 1758 aaPredicted RBP16.65■□□□□ 0.26
CCNC-218ENST00000524049 RGPD4Q7Z3J3 1758 aa16.65■□□□□ 0.26
CCNC-218ENST00000524049 EXOC5O00471 708 aa16.65■□□□□ 0.26
CCNC-218ENST00000524049 ARHGEF25Q86VW2 580 aa16.65■□□□□ 0.26
CCNC-218ENST00000524049 PROM2Q8N271 834 aa16.65■□□□□ 0.26
CCNC-218ENST00000524049 STK32BQ9NY57 414 aa16.65■□□□□ 0.26
CCNC-218ENST00000524049 EVC2Q86UK5 1308 aa16.65■□□□□ 0.26
CCNC-218ENST00000524049 CSB-PGBD3P0DP91 1061 aa16.64■□□□□ 0.25
CCNC-218ENST00000524049 AXIN2Q9Y2T1 843 aa16.64■□□□□ 0.25
CCNC-218ENST00000524049 PEAK1Q9H792 1746 aa16.64■□□□□ 0.25
CCNC-218ENST00000524049 TXNRD1Q16881 649 aa16.63■□□□□ 0.25
CCNC-218ENST00000524049 ZBTB7AO95365 584 aa16.62■□□□□ 0.25
CCNC-218ENST00000524049 SLC15A2Q16348 729 aa16.62■□□□□ 0.25
CCNC-218ENST00000524049 PTF1AQ7RTS3 328 aa16.62■□□□□ 0.25
CCNC-218ENST00000524049 TTC21AQ8NDW8 1320 aa16.62■□□□□ 0.25
CCNC-218ENST00000524049 CPSF1Q10570 1443 aaKnown RBP16.62■□□□□ 0.25
CCNC-218ENST00000524049 PTGER2P43116 358 aa16.61■□□□□ 0.25
CCNC-218ENST00000524049 TTC21BQ7Z4L5 1316 aa16.61■□□□□ 0.25
CCNC-218ENST00000524049 CCDC7Q96M83 1385 aa16.61■□□□□ 0.25
CCNC-218ENST00000524049 LRRC37A3O60309 1634 aa16.6■□□□□ 0.25
CCNC-218ENST00000524049 MTFR1LQ9H019 292 aa16.6■□□□□ 0.25
CCNC-218ENST00000524049 PDGFDQ9GZP0 370 aaPredicted RBP16.59■□□□□ 0.25
CCNC-218ENST00000524049 ATF5Q9Y2D1 282 aaPredicted RBP16.59■□□□□ 0.25
CCNC-218ENST00000524049 SYT17Q9BSW7 474 aa16.58■□□□□ 0.24
CCNC-218ENST00000524049 ZNF784Q8NCA9 323 aaPredicted RBP16.57■□□□□ 0.24
CCNC-218ENST00000524049 CASZ1Q86V15 1759 aa16.56■□□□□ 0.24
CCNC-218ENST00000524049 FHDC1Q9C0D6 1143 aaPredicted RBP16.56■□□□□ 0.24
CCNC-218ENST00000524049 COL18A1P39060 1754 aa16.56■□□□□ 0.24
CCNC-218ENST00000524049 SBF2Q86WG5 1849 aa16.55■□□□□ 0.24
CCNC-218ENST00000524049 SOX12O15370 315 aa16.54■□□□□ 0.24
CCNC-218ENST00000524049 SGIP1Q9BQI5 828 aa16.54■□□□□ 0.24
CCNC-218ENST00000524049 ABCC6O95255 1503 aa16.54■□□□□ 0.24
CCNC-218ENST00000524049 TNS2Q63HR2 1409 aa16.53■□□□□ 0.24
CCNC-218ENST00000524049 PIK3C2AO00443 1686 aa16.53■□□□□ 0.24
CCNC-218ENST00000524049 KCNA4P22459 653 aa16.53■□□□□ 0.24
CCNC-218ENST00000524049 ARXQ96QS3 562 aa16.53■□□□□ 0.24
CCNC-218ENST00000524049 QRICH2Q9H0J4 1663 aa16.53■□□□□ 0.24
CCNC-218ENST00000524049 KTN1Q86UP2 1357 aaKnown RBP16.52■□□□□ 0.24
CCNC-218ENST00000524049 L3MBTL2Q969R5 705 aa16.52■□□□□ 0.24
CCNC-218ENST00000524049 CAPN15O75808 1086 aa16.51■□□□□ 0.23
CCNC-218ENST00000524049 IL2RBP14784 551 aa16.51■□□□□ 0.23
CCNC-218ENST00000524049 NLRP2Q9NX02 1062 aa16.51■□□□□ 0.23
CCNC-218ENST00000524049 TRPM1Q7Z4N2 1603 aa16.51■□□□□ 0.23
CCNC-218ENST00000524049 USP31Q70CQ4 1352 aa16.51■□□□□ 0.23
CCNC-218ENST00000524049 MAP3K5Q99683 1374 aa16.51■□□□□ 0.23
CCNC-218ENST00000524049 ERBB3P21860 1342 aa16.5■□□□□ 0.23
CCNC-218ENST00000524049 SLC16A10Q8TF71 515 aa16.5■□□□□ 0.23
CCNC-218ENST00000524049 ACSBG1Q96GR2 724 aa16.5■□□□□ 0.23
CCNC-218ENST00000524049 WNK3Q9BYP7 1800 aa16.49■□□□□ 0.23
CCNC-218ENST00000524049 MYOM1P52179 1685 aa16.49■□□□□ 0.23
CCNC-218ENST00000524049 NFAT5O94916 1531 aa16.49■□□□□ 0.23
CCNC-218ENST00000524049 ROCK2O75116 1388 aaKnown RBP16.49■□□□□ 0.23
CCNC-218ENST00000524049 AKAP12Q02952 1782 aa16.49■□□□□ 0.23
CCNC-218ENST00000524049 SLC27A3Q5K4L6 730 aa16.47■□□□□ 0.23
CCNC-218ENST00000524049 C1QTNF8P60827 252 aa16.46■□□□□ 0.23
CCNC-218ENST00000524049 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.46■□□□□ 0.23
CCNC-218ENST00000524049 ANKRD24Q8TF21 1146 aa16.46■□□□□ 0.23
CCNC-218ENST00000524049 POLD1P28340 1107 aa16.45■□□□□ 0.22
CCNC-218ENST00000524049 GPR162Q16538 588 aa16.45■□□□□ 0.22
CCNC-218ENST00000524049 HDGFL2Q7Z4V5 671 aaPredicted RBP16.45■□□□□ 0.22
CCNC-218ENST00000524049 NHSQ6T4R5 1651 aa16.44■□□□□ 0.22
CCNC-218ENST00000524049 SBNO2Q9Y2G9 1366 aa16.44■□□□□ 0.22
CCNC-218ENST00000524049 SENP3-EIF4A1A0A087X0R7 540 aa16.44■□□□□ 0.22
CCNC-218ENST00000524049 DSG3P32926 999 aa16.44■□□□□ 0.22
CCNC-218ENST00000524049 SPINK5Q9NQ38 1064 aaPredicted RBP16.44■□□□□ 0.22
CCNC-218ENST00000524049 ZNF827Q17R98 1081 aa16.43■□□□□ 0.22
CCNC-218ENST00000524049 AKT1S1Q96B36 256 aa16.43■□□□□ 0.22
CCNC-218ENST00000524049 LRRC4BQ9NT99 713 aa16.43■□□□□ 0.22
CCNC-218ENST00000524049 NME9Q86XW9 330 aa16.42■□□□□ 0.22
CCNC-218ENST00000524049 TMC1Q8TDI8 760 aa16.41■□□□□ 0.22
CCNC-218ENST00000524049 PUS7Q96PZ0 661 aaKnown RBP16.41■□□□□ 0.22
CCNC-218ENST00000524049 TERF2IPQ9NYB0 399 aa16.41■□□□□ 0.22
CCNC-218ENST00000524049 HMGB2P26583 209 aaKnown RBP16.4■□□□□ 0.22
CCNC-218ENST00000524049 IP6K1Q92551 441 aa16.4■□□□□ 0.22
CCNC-218ENST00000524049 SIN3AQ96ST3 1273 aa16.4■□□□□ 0.22
CCNC-218ENST00000524049 RGPD5Q99666 1765 aa16.4■□□□□ 0.22
CCNC-218ENST00000524049 PAPPAQ13219 1627 aa16.4■□□□□ 0.22
CCNC-218ENST00000524049 DDX54Q8TDD1 881 aaKnown RBP16.39■□□□□ 0.21
CCNC-218ENST00000524049 TFCP2L1Q9NZI6 479 aa16.39■□□□□ 0.21
CCNC-218ENST00000524049 EDC4Q6P2E9 1401 aaKnown RBP16.38■□□□□ 0.21
CCNC-218ENST00000524049 NEUROD1Q13562 356 aa16.38■□□□□ 0.21
CCNC-218ENST00000524049 GRIN3BO60391 1043 aa16.37■□□□□ 0.21
CCNC-218ENST00000524049 GIGYF1O75420 1035 aaPredicted RBP16.37■□□□□ 0.21
CCNC-218ENST00000524049 KLHL34Q8N239 644 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms