RNA–Protein interactions for RNA: ENST00000523647.1

SMARCE1P4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 4, humanhuman

BASIC

Gene SMARCE1P4, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P4-201ENST00000523647 ARID5BQ14865 1188 aa8.35□□□□□ -1.07
SMARCE1P4-201ENST00000523647 NBPF20Q3BBV1 942 aa8.35□□□□□ -1.07
SMARCE1P4-201ENST00000523647 PCDHB9Q9Y5E1 797 aa8.35□□□□□ -1.07
SMARCE1P4-201ENST00000523647 ESPNB1AK53 854 aa8.34□□□□□ -1.07
SMARCE1P4-201ENST00000523647 AVPP01185 164 aa8.34□□□□□ -1.07
SMARCE1P4-201ENST00000523647 FSHRP23945 695 aa8.34□□□□□ -1.07
SMARCE1P4-201ENST00000523647 EIF4G2P78344 907 aaKnown RBP eCLIP8.34□□□□□ -1.07
SMARCE1P4-201ENST00000523647 NR5A1Q13285 461 aa8.34□□□□□ -1.07
SMARCE1P4-201ENST00000523647 KCTD15Q96SI1 283 aaPredicted RBP8.34□□□□□ -1.07
SMARCE1P4-201ENST00000523647 WASF2Q9Y6W5 498 aa8.34□□□□□ -1.07
SMARCE1P4-201ENST00000523647 NR3C2P08235 984 aa8.33□□□□□ -1.08
SMARCE1P4-201ENST00000523647 SOX11P35716 441 aa8.33□□□□□ -1.08
SMARCE1P4-201ENST00000523647 NNTQ13423 1086 aa8.33□□□□□ -1.08
SMARCE1P4-201ENST00000523647 PKDCCQ504Y2 493 aa8.32□□□□□ -1.08
SMARCE1P4-201ENST00000523647 HPS1Q92902 700 aa8.32□□□□□ -1.08
SMARCE1P4-201ENST00000523647 POM121CA8CG34 1229 aa8.31□□□□□ -1.08
SMARCE1P4-201ENST00000523647 INTS6LQ5JSJ4 861 aaKnown RBP8.31□□□□□ -1.08
SMARCE1P4-201ENST00000523647 SEPT12Q8IYM1 358 aa8.31□□□□□ -1.08
SMARCE1P4-201ENST00000523647 ZMYND15Q9H091 742 aa8.31□□□□□ -1.08
SMARCE1P4-201ENST00000523647 TRAK2O60296 914 aa8.3□□□□□ -1.08
SMARCE1P4-201ENST00000523647 CRIPAKQ8N1N5 446 aa8.3□□□□□ -1.08
SMARCE1P4-201ENST00000523647 KLF16Q9BXK1 252 aaPredicted RBP8.3□□□□□ -1.08
SMARCE1P4-201ENST00000523647 ALG2Q9H553 416 aa8.3□□□□□ -1.08
SMARCE1P4-201ENST00000523647 GIGYF1O75420 1035 aaPredicted RBP8.29□□□□□ -1.08
SMARCE1P4-201ENST00000523647 CCDC116Q8IYX3 515 aa8.29□□□□□ -1.08
SMARCE1P4-201ENST00000523647 ADAMTS19Q8TE59 1207 aa8.29□□□□□ -1.08
SMARCE1P4-201ENST00000523647 CEP126Q9P2H0 1117 aa8.29□□□□□ -1.08
SMARCE1P4-201ENST00000523647 LCE2BO14633 110 aa8.28□□□□□ -1.08
SMARCE1P4-201ENST00000523647 SMCPP49901 116 aaPredicted RBP8.28□□□□□ -1.08
SMARCE1P4-201ENST00000523647 CTC1Q2NKJ3 1217 aa8.28□□□□□ -1.08
SMARCE1P4-201ENST00000523647 C14orf37Q86TY3 774 aa8.28□□□□□ -1.08
SMARCE1P4-201ENST00000523647 TIMP2P16035 220 aa8.27□□□□□ -1.09
SMARCE1P4-201ENST00000523647 MYT1Q01538 1121 aa8.27□□□□□ -1.09
SMARCE1P4-201ENST00000523647 DHX9Q08211 1270 aaKnown RBP8.27□□□□□ -1.09
SMARCE1P4-201ENST00000523647 SEMA3FQ13275 785 aa8.27□□□□□ -1.09
SMARCE1P4-201ENST00000523647 PPP1R26Q5T8A7 1209 aaPredicted RBP8.27□□□□□ -1.09
SMARCE1P4-201ENST00000523647 Q6ZNB5 142 aa8.27□□□□□ -1.09
SMARCE1P4-201ENST00000523647 CCDC125Q86Z20 511 aa8.27□□□□□ -1.09
SMARCE1P4-201ENST00000523647 PHTF2Q8N3S3 785 aa8.27□□□□□ -1.09
SMARCE1P4-201ENST00000523647 RNF20Q5VTR2 975 aa8.26□□□□□ -1.09
SMARCE1P4-201ENST00000523647 EMILIN1Q9Y6C2 1016 aa8.26□□□□□ -1.09
SMARCE1P4-201ENST00000523647 ERVH48-1M5A8F1 160 aa8.25□□□□□ -1.09
SMARCE1P4-201ENST00000523647 WDR4P57081 412 aaKnown RBP8.25□□□□□ -1.09
SMARCE1P4-201ENST00000523647 GLMNQ92990 594 aa8.25□□□□□ -1.09
SMARCE1P4-201ENST00000523647 ITPKCQ96DU7 683 aa8.25□□□□□ -1.09
SMARCE1P4-201ENST00000523647 CHIC2Q9UKJ5 165 aa8.25□□□□□ -1.09
SMARCE1P4-201ENST00000523647 ZIC2O95409 532 aaPredicted RBP8.24□□□□□ -1.09
SMARCE1P4-201ENST00000523647 RAB15P59190 212 aa8.24□□□□□ -1.09
SMARCE1P4-201ENST00000523647 AAASQ9NRG9 546 aa8.24□□□□□ -1.09
SMARCE1P4-201ENST00000523647 PGPEP1Q9NXJ5 209 aa8.24□□□□□ -1.09
SMARCE1P4-201ENST00000523647 PODXL2Q9NZ53 605 aa8.24□□□□□ -1.09
SMARCE1P4-201ENST00000523647 ST8SIA5O15466 376 aa8.23□□□□□ -1.09
SMARCE1P4-201ENST00000523647 SLFNL1Q499Z3 407 aa8.23□□□□□ -1.09
SMARCE1P4-201ENST00000523647 HDGFL1Q5TGJ6 251 aa8.23□□□□□ -1.09
SMARCE1P4-201ENST00000523647 ZNF784Q8NCA9 323 aaPredicted RBP8.23□□□□□ -1.09
SMARCE1P4-201ENST00000523647 CCDC85AQ96PX6 553 aaPredicted RBP8.23□□□□□ -1.09
SMARCE1P4-201ENST00000523647 UCN2Q96RP3 112 aa8.23□□□□□ -1.09
SMARCE1P4-201ENST00000523647 ZFAND3Q9H8U3 227 aa8.23□□□□□ -1.09
SMARCE1P4-201ENST00000523647 TMPRSS4Q9NRS4 437 aa8.23□□□□□ -1.09
SMARCE1P4-201ENST00000523647 AXIN1O15169 862 aa8.22□□□□□ -1.09
SMARCE1P4-201ENST00000523647 CAPN5O15484 640 aaPredicted RBP8.22□□□□□ -1.09
SMARCE1P4-201ENST00000523647 TRAF7Q6Q0C0 670 aa8.22□□□□□ -1.09
SMARCE1P4-201ENST00000523647 RNF135Q8IUD6 432 aa8.22□□□□□ -1.09
SMARCE1P4-201ENST00000523647 NFATC2IPQ8NCF5 419 aa8.22□□□□□ -1.09
SMARCE1P4-201ENST00000523647 PIK3CDO00329 1044 aa8.21□□□□□ -1.1
SMARCE1P4-201ENST00000523647 LILRA1O75019 489 aa8.21□□□□□ -1.1
SMARCE1P4-201ENST00000523647 Q6ZVU0 165 aa8.21□□□□□ -1.1
SMARCE1P4-201ENST00000523647 ZNF777Q9ULD5 760 aaPredicted RBP8.21□□□□□ -1.1
SMARCE1P4-201ENST00000523647 PCDHB11Q9Y5F2 797 aa8.21□□□□□ -1.1
SMARCE1P4-201ENST00000523647 ERVK-9P63128 1117 aa8.2□□□□□ -1.1
SMARCE1P4-201ENST00000523647 MEIOBQ8N635 442 aa8.2□□□□□ -1.1
SMARCE1P4-201ENST00000523647 TSGA10IPQ3SY00 556 aa8.19□□□□□ -1.1
SMARCE1P4-201ENST00000523647 PLPP7Q8NBV4 271 aa8.19□□□□□ -1.1
SMARCE1P4-201ENST00000523647 TRIM52Q96A61 297 aa8.19□□□□□ -1.1
SMARCE1P4-201ENST00000523647 CALR3Q96L12 384 aaKnown RBP8.19□□□□□ -1.1
SMARCE1P4-201ENST00000523647 DOLKQ9UPQ8 538 aa8.19□□□□□ -1.1
SMARCE1P4-201ENST00000523647 SCTRP47872 440 aa8.18□□□□□ -1.1
SMARCE1P4-201ENST00000523647 CBLBQ13191 982 aa8.18□□□□□ -1.1
SMARCE1P4-201ENST00000523647 MAP7D1Q3KQU3 841 aa8.18□□□□□ -1.1
SMARCE1P4-201ENST00000523647 CC2D2BQ6DHV5 1058 aa8.18□□□□□ -1.1
SMARCE1P4-201ENST00000523647 CDCA7Q9BWT1 371 aaPredicted RBP8.18□□□□□ -1.1
SMARCE1P4-201ENST00000523647 CYLDQ9NQC7 956 aa8.18□□□□□ -1.1
SMARCE1P4-201ENST00000523647 ADD1P35611 737 aaKnown RBP8.17□□□□□ -1.1
SMARCE1P4-201ENST00000523647 TRIM46Q7Z4K8 759 aa8.17□□□□□ -1.1
SMARCE1P4-201ENST00000523647 DACH1Q9UI36 760 aa8.17□□□□□ -1.1
SMARCE1P4-201ENST00000523647 ADH1AP07327 375 aa8.16□□□□□ -1.1
SMARCE1P4-201ENST00000523647 SKIP12755 728 aa8.16□□□□□ -1.1
SMARCE1P4-201ENST00000523647 BMP1P13497 986 aa8.16□□□□□ -1.1
SMARCE1P4-201ENST00000523647 MRPL14Q6P1L8 145 aaKnown RBP8.16□□□□□ -1.1
SMARCE1P4-201ENST00000523647 TBC1D9Q6ZT07 1266 aa8.16□□□□□ -1.1
SMARCE1P4-201ENST00000523647 ATP13A2Q9NQ11 1180 aa8.16□□□□□ -1.1
SMARCE1P4-201ENST00000523647 USP17L5A8MUK1 530 aa8.15□□□□□ -1.1
SMARCE1P4-201ENST00000523647 ATP9BO43861 1147 aa8.15□□□□□ -1.1
SMARCE1P4-201ENST00000523647 PLEKHM2Q8IWE5 1019 aa8.15□□□□□ -1.1
SMARCE1P4-201ENST00000523647 LINC00528Q8N1L1 170 aa8.15□□□□□ -1.1
SMARCE1P4-201ENST00000523647 KDF1Q8NAX2 398 aaPredicted RBP8.15□□□□□ -1.1
SMARCE1P4-201ENST00000523647 OSBPL3Q9H4L5 887 aa8.15□□□□□ -1.1
SMARCE1P4-201ENST00000523647 LZTS3O60299 673 aaPredicted RBP8.14□□□□□ -1.11
SMARCE1P4-201ENST00000523647 OXLD1Q5BKU9 147 aa8.14□□□□□ -1.11
SMARCE1P4-201ENST00000523647 PPP1R12CQ9BZL4 782 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms