RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 MARCH10Q8NA82 808 aaPredicted RBP37.18■■■■□ 3.54
PVT1-219ENST00000523427 BCL11BQ9C0K0 894 aaPredicted RBP37.18■■■■□ 3.54
PVT1-219ENST00000523427 LRRC37A3O60309 1634 aa37.18■■■■□ 3.54
PVT1-219ENST00000523427 PLSCR1O15162 318 aa37.17■■■■□ 3.54
PVT1-219ENST00000523427 ARHGEF25Q86VW2 580 aa37.17■■■■□ 3.54
PVT1-219ENST00000523427 PEAK1Q9H792 1746 aa37.16■■■■□ 3.54
PVT1-219ENST00000523427 YY1P25490 414 aa37.16■■■■□ 3.54
PVT1-219ENST00000523427 KCNH5Q8NCM2 988 aa37.16■■■■□ 3.54
PVT1-219ENST00000523427 ZNF692Q9BU19 519 aaPredicted RBP37.16■■■■□ 3.54
PVT1-219ENST00000523427 ANO8Q9HCE9 1232 aaPredicted RBP37.16■■■■□ 3.54
PVT1-219ENST00000523427 CPSF1Q10570 1443 aaKnown RBP37.16■■■■□ 3.54
PVT1-219ENST00000523427 ROCK2O75116 1388 aaKnown RBP37.14■■■■□ 3.54
PVT1-219ENST00000523427 COL18A1P39060 1754 aa37.14■■■■□ 3.54
PVT1-219ENST00000523427 CDCA7Q9BWT1 371 aaPredicted RBP37.12■■■■□ 3.53
PVT1-219ENST00000523427 DCAF8L1A6NGE4 600 aa37.1■■■■□ 3.53
PVT1-219ENST00000523427 CARD10Q9BWT7 1032 aa37.1■■■■□ 3.53
PVT1-219ENST00000523427 SBF2Q86WG5 1849 aa37.1■■■■□ 3.53
PVT1-219ENST00000523427 PDGFDQ9GZP0 370 aaPredicted RBP37.09■■■■□ 3.53
PVT1-219ENST00000523427 TRPM1Q7Z4N2 1603 aa37.08■■■■□ 3.53
PVT1-219ENST00000523427 PROM2Q8N271 834 aa37.08■■■■□ 3.53
PVT1-219ENST00000523427 KTN1Q86UP2 1357 aaKnown RBP37.07■■■■□ 3.53
PVT1-219ENST00000523427 EXOC5O00471 708 aa37.07■■■■□ 3.52
PVT1-219ENST00000523427 TTC21AQ8NDW8 1320 aa37.07■■■■□ 3.52
PVT1-219ENST00000523427 ZBTB7AO95365 584 aa37.06■■■■□ 3.52
PVT1-219ENST00000523427 SUGP2Q8IX01 1082 aaKnown RBP eCLIP37.06■■■■□ 3.52
PVT1-219ENST00000523427 RGPD5Q99666 1765 aa37.05■■■■□ 3.52
PVT1-219ENST00000523427 NINLQ9Y2I6 1382 aa37.02■■■■□ 3.52
PVT1-219ENST00000523427 TXNRD1Q16881 649 aa37.01■■■■□ 3.52
PVT1-219ENST00000523427 WNK3Q9BYP7 1800 aa37.01■■■■□ 3.51
PVT1-219ENST00000523427 ATF5Q9Y2D1 282 aaPredicted RBP37■■■■□ 3.51
PVT1-219ENST00000523427 AKAP12Q02952 1782 aa36.99■■■■□ 3.51
PVT1-219ENST00000523427 STK32BQ9NY57 414 aa36.99■■■■□ 3.51
PVT1-219ENST00000523427 RGPD3A6NKT7 1758 aaPredicted RBP36.99■■■■□ 3.51
PVT1-219ENST00000523427 RGPD4Q7Z3J3 1758 aa36.99■■■■□ 3.51
PVT1-219ENST00000523427 CCDC7Q96M83 1385 aa36.97■■■■□ 3.51
PVT1-219ENST00000523427 TMC1Q8TDI8 760 aa36.97■■■■□ 3.51
PVT1-219ENST00000523427 NLRP2Q9NX02 1062 aa36.97■■■■□ 3.51
PVT1-219ENST00000523427 NFAT5O94916 1531 aa36.96■■■■□ 3.51
PVT1-219ENST00000523427 ACSBG1Q96GR2 724 aa36.96■■■■□ 3.51
PVT1-219ENST00000523427 BCL9O00512 1426 aa36.95■■■■□ 3.51
PVT1-219ENST00000523427 NME9Q86XW9 330 aa36.95■■■■□ 3.51
PVT1-219ENST00000523427 SLC15A2Q16348 729 aa36.92■■■■□ 3.5
PVT1-219ENST00000523427 CASZ1Q86V15 1759 aa36.91■■■■□ 3.5
PVT1-219ENST00000523427 TNS2Q63HR2 1409 aa36.88■■■■□ 3.49
PVT1-219ENST00000523427 PTGER2P43116 358 aa36.88■■■■□ 3.49
PVT1-219ENST00000523427 CARD11Q9BXL7 1154 aa36.88■■■■□ 3.49
PVT1-219ENST00000523427 ERBB3P21860 1342 aa36.86■■■■□ 3.49
PVT1-219ENST00000523427 SLC12A5Q9H2X9 1139 aa36.86■■■■□ 3.49
PVT1-219ENST00000523427 HDGFL2Q7Z4V5 671 aaPredicted RBP36.85■■■■□ 3.49
PVT1-219ENST00000523427 USP31Q70CQ4 1352 aa36.85■■■■□ 3.49
PVT1-219ENST00000523427 IL2RBP14784 551 aa36.84■■■■□ 3.49
PVT1-219ENST00000523427 ANKRD24Q8TF21 1146 aa36.84■■■■□ 3.49
PVT1-219ENST00000523427 MON2Q7Z3U7 1717 aa36.83■■■■□ 3.49
PVT1-219ENST00000523427 SBNO2Q9Y2G9 1366 aa36.81■■■■□ 3.48
PVT1-219ENST00000523427 MYOM1P52179 1685 aa36.81■■■■□ 3.48
PVT1-219ENST00000523427 FHDC1Q9C0D6 1143 aaPredicted RBP36.81■■■■□ 3.48
PVT1-219ENST00000523427 CD163L1Q9NR16 1453 aa36.79■■■■□ 3.48
PVT1-219ENST00000523427 ABCC6O95255 1503 aa36.79■■■■□ 3.48
PVT1-219ENST00000523427 MTFR1LQ9H019 292 aa36.78■■■■□ 3.48
PVT1-219ENST00000523427 LTV1Q96GA3 475 aaPredicted RBP36.77■■■■□ 3.48
PVT1-219ENST00000523427 SYT17Q9BSW7 474 aa36.77■■■■□ 3.48
PVT1-219ENST00000523427 KAT6BQ8WYB5 2073 aa36.76■■■■□ 3.48
PVT1-219ENST00000523427 NHSQ6T4R5 1651 aa36.74■■■■□ 3.47
PVT1-219ENST00000523427 TERF2IPQ9NYB0 399 aa36.74■■■■□ 3.47
PVT1-219ENST00000523427 DDX54Q8TDD1 881 aaKnown RBP36.73■■■■□ 3.47
PVT1-219ENST00000523427 LTN1O94822 1766 aa36.73■■■■□ 3.47
PVT1-219ENST00000523427 EDC4Q6P2E9 1401 aaKnown RBP36.7■■■■□ 3.47
PVT1-219ENST00000523427 A0A1W2PP64 1363 aa36.69■■■■□ 3.46
PVT1-219ENST00000523427 ZNF827Q17R98 1081 aa36.69■■■■□ 3.46
PVT1-219ENST00000523427 SGIP1Q9BQI5 828 aa36.68■■■■□ 3.46
PVT1-219ENST00000523427 ARXQ96QS3 562 aa36.67■■■■□ 3.46
PVT1-219ENST00000523427 LRRC4BQ9NT99 713 aa36.67■■■■□ 3.46
PVT1-219ENST00000523427 IP6K1Q92551 441 aa36.65■■■■□ 3.46
PVT1-219ENST00000523427 USP54Q70EL1 1684 aa36.64■■■■□ 3.46
PVT1-219ENST00000523427 BTAF1O14981 1849 aa36.64■■■■□ 3.46
PVT1-219ENST00000523427 SYTL4Q96C24 671 aaPredicted RBP36.64■■■■□ 3.46
PVT1-219ENST00000523427 KLHL34Q8N239 644 aa36.63■■■■□ 3.45
PVT1-219ENST00000523427 TONSLQ96HA7 1378 aa36.63■■■■□ 3.45
PVT1-219ENST00000523427 FBLN1P23142 703 aa36.62■■■■□ 3.45
PVT1-219ENST00000523427 ZNF784Q8NCA9 323 aaPredicted RBP36.61■■■■□ 3.45
PVT1-219ENST00000523427 KCNQ4P56696 695 aa36.6■■■■□ 3.45
PVT1-219ENST00000523427 COG3Q96JB2 828 aa36.58■■■■□ 3.45
PVT1-219ENST00000523427 PAPPAQ13219 1627 aa36.58■■■■□ 3.45
PVT1-219ENST00000523427 AMPHP49418 695 aa36.57■■■■□ 3.44
PVT1-219ENST00000523427 PRIM1P49642 420 aaKnown RBP36.55■■■■□ 3.44
PVT1-219ENST00000523427 MAP3K19Q56UN5 1328 aa36.55■■■■□ 3.44
PVT1-219ENST00000523427 AKT1S1Q96B36 256 aa36.54■■■■□ 3.44
PVT1-219ENST00000523427 ST20-MTHFSA0A0A6YYL1 179 aa36.53■■■■□ 3.44
PVT1-219ENST00000523427 PUS7Q96PZ0 661 aaKnown RBP36.53■■■■□ 3.44
PVT1-219ENST00000523427 HOXC9P31274 260 aa36.52■■■■□ 3.44
PVT1-219ENST00000523427 SLC27A3Q5K4L6 730 aa36.52■■■■□ 3.44
PVT1-219ENST00000523427 GPR162Q16538 588 aa36.51■■■■□ 3.44
PVT1-219ENST00000523427 TFCP2L1Q9NZI6 479 aa36.51■■■■□ 3.44
PVT1-219ENST00000523427 UTRNP46939 3433 aa36.49■■■■□ 3.43
PVT1-219ENST00000523427 POLD1P28340 1107 aa36.49■■■■□ 3.43
PVT1-219ENST00000523427 PELP1Q8IZL8 1130 aaKnown RBP36.49■■■■□ 3.43
PVT1-219ENST00000523427 TESK2Q96S53 571 aa36.49■■■■□ 3.43
PVT1-219ENST00000523427 ZCRB1Q8TBF4 217 aaKnown RBP36.48■■■■□ 3.43
PVT1-219ENST00000523427 PNPLA7Q6ZV29 1317 aa36.47■■■■□ 3.43
PVT1-219ENST00000523427 SLC16A10Q8TF71 515 aa36.46■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms