RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 BCL9O00512 1426 aa17.92■□□□□ 0.46
TOP1MT-217ENST00000523417 PLSCR1O15162 318 aa17.92■□□□□ 0.46
TOP1MT-217ENST00000523417 R3HDM1Q15032 1099 aaKnown RBP17.92■□□□□ 0.46
TOP1MT-217ENST00000523417 SLC12A5Q9H2X9 1139 aa17.92■□□□□ 0.46
TOP1MT-217ENST00000523417 CD163L1Q9NR16 1453 aa17.91■□□□□ 0.46
TOP1MT-217ENST00000523417 ZBTB7CA1YPR0 619 aa17.91■□□□□ 0.46
TOP1MT-217ENST00000523417 TRIM26Q12899 539 aaPredicted RBP17.91■□□□□ 0.46
TOP1MT-217ENST00000523417 HDGFL2Q7Z4V5 671 aaPredicted RBP17.91■□□□□ 0.46
TOP1MT-217ENST00000523417 TERF2IPQ9NYB0 399 aa17.91■□□□□ 0.46
TOP1MT-217ENST00000523417 TESK2Q96S53 571 aa17.9■□□□□ 0.46
TOP1MT-217ENST00000523417 TNS1Q9HBL0 1735 aaKnown RBP17.89■□□□□ 0.46
TOP1MT-217ENST00000523417 PARP4Q9UKK3 1724 aaKnown RBP17.89■□□□□ 0.46
TOP1MT-217ENST00000523417 NBPF14Q5TI25 921 aa17.89■□□□□ 0.45
TOP1MT-217ENST00000523417 BCL11BQ9C0K0 894 aaPredicted RBP17.89■□□□□ 0.45
TOP1MT-217ENST00000523417 LRP5O75197 1615 aa17.89■□□□□ 0.45
TOP1MT-217ENST00000523417 AKAP12Q02952 1782 aa17.89■□□□□ 0.45
TOP1MT-217ENST00000523417 OVOS2A0A0G2JMS6 1433 aa17.89■□□□□ 0.45
TOP1MT-217ENST00000523417 OVOS2A0A0J9YW53 1432 aa17.89■□□□□ 0.45
TOP1MT-217ENST00000523417 OVOS2Q6IE36 1432 aa17.89■□□□□ 0.45
TOP1MT-217ENST00000523417 ABCC6O95255 1503 aa17.88■□□□□ 0.45
TOP1MT-217ENST00000523417 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.88■□□□□ 0.45
TOP1MT-217ENST00000523417 MARCH10Q8NA82 808 aaPredicted RBP17.88■□□□□ 0.45
TOP1MT-217ENST00000523417 TMC1Q8TDI8 760 aa17.88■□□□□ 0.45
TOP1MT-217ENST00000523417 NFAT5O94916 1531 aa17.88■□□□□ 0.45
TOP1MT-217ENST00000523417 EXOC5O00471 708 aa17.87■□□□□ 0.45
TOP1MT-217ENST00000523417 NME9Q86XW9 330 aa17.87■□□□□ 0.45
TOP1MT-217ENST00000523417 CCDC7Q96M83 1385 aa17.87■□□□□ 0.45
TOP1MT-217ENST00000523417 NINLQ9Y2I6 1382 aa17.87■□□□□ 0.45
TOP1MT-217ENST00000523417 EDC4Q6P2E9 1401 aaKnown RBP17.87■□□□□ 0.45
TOP1MT-217ENST00000523417 ST20-MTHFSA0A0A6YYL1 179 aa17.86■□□□□ 0.45
TOP1MT-217ENST00000523417 CSB-PGBD3P0DP91 1061 aa17.86■□□□□ 0.45
TOP1MT-217ENST00000523417 SOX12O15370 315 aa17.85■□□□□ 0.45
TOP1MT-217ENST00000523417 PEAK1Q9H792 1746 aa17.84■□□□□ 0.45
TOP1MT-217ENST00000523417 ERBB3P21860 1342 aa17.83■□□□□ 0.44
TOP1MT-217ENST00000523417 A0A1W2PP64 1363 aa17.82■□□□□ 0.44
TOP1MT-217ENST00000523417 MON2Q7Z3U7 1717 aa17.82■□□□□ 0.44
TOP1MT-217ENST00000523417 PROM2Q8N271 834 aa17.82■□□□□ 0.44
TOP1MT-217ENST00000523417 TIMELESSQ9UNS1 1208 aa17.82■□□□□ 0.44
TOP1MT-217ENST00000523417 USP54Q70EL1 1684 aa17.81■□□□□ 0.44
TOP1MT-217ENST00000523417 IP6K1Q92551 441 aa17.81■□□□□ 0.44
TOP1MT-217ENST00000523417 PTF1AQ7RTS3 328 aa17.8■□□□□ 0.44
TOP1MT-217ENST00000523417 NLRP2Q9NX02 1062 aa17.79■□□□□ 0.44
TOP1MT-217ENST00000523417 LRRC37A3O60309 1634 aa17.79■□□□□ 0.44
TOP1MT-217ENST00000523417 RREB1Q92766 1687 aa17.78■□□□□ 0.44
TOP1MT-217ENST00000523417 IL2RBP14784 551 aa17.78■□□□□ 0.44
TOP1MT-217ENST00000523417 ANKRD24Q8TF21 1146 aa17.78■□□□□ 0.44
TOP1MT-217ENST00000523417 TMF1P82094 1093 aa17.76■□□□□ 0.43
TOP1MT-217ENST00000523417 COG3Q96JB2 828 aa17.76■□□□□ 0.43
TOP1MT-217ENST00000523417 KCNQ2O43526 872 aa17.75■□□□□ 0.43
TOP1MT-217ENST00000523417 SPON1Q9HCB6 807 aa17.75■□□□□ 0.43
TOP1MT-217ENST00000523417 TNS2Q63HR2 1409 aa17.74■□□□□ 0.43
TOP1MT-217ENST00000523417 TXNRD1Q16881 649 aa17.74■□□□□ 0.43
TOP1MT-217ENST00000523417 CDCA8Q53HL2 280 aa17.74■□□□□ 0.43
TOP1MT-217ENST00000523417 ANKRD36BQ8N2N9 1353 aa17.74■□□□□ 0.43
TOP1MT-217ENST00000523417 RGPD3A6NKT7 1758 aaPredicted RBP17.74■□□□□ 0.43
TOP1MT-217ENST00000523417 RGPD4Q7Z3J3 1758 aa17.74■□□□□ 0.43
TOP1MT-217ENST00000523417 RGPD5Q99666 1765 aa17.74■□□□□ 0.43
TOP1MT-217ENST00000523417 CLSPNQ9HAW4 1339 aa17.73■□□□□ 0.43
TOP1MT-217ENST00000523417 NUP188Q5SRE5 1749 aa17.73■□□□□ 0.43
TOP1MT-217ENST00000523417 SBF2Q86WG5 1849 aa17.73■□□□□ 0.43
TOP1MT-217ENST00000523417 FYB1O15117 783 aa17.73■□□□□ 0.43
TOP1MT-217ENST00000523417 MAP3K19Q56UN5 1328 aa17.72■□□□□ 0.43
TOP1MT-217ENST00000523417 USP47Q96K76 1375 aa17.71■□□□□ 0.43
TOP1MT-217ENST00000523417 HOXC9P31274 260 aa17.71■□□□□ 0.43
TOP1MT-217ENST00000523417 ANO8Q9HCE9 1232 aaPredicted RBP17.71■□□□□ 0.43
TOP1MT-217ENST00000523417 WNK3Q9BYP7 1800 aa17.7■□□□□ 0.42
TOP1MT-217ENST00000523417 AMPHP49418 695 aa17.69■□□□□ 0.42
TOP1MT-217ENST00000523417 SLC15A2Q16348 729 aa17.69■□□□□ 0.42
TOP1MT-217ENST00000523417 FBLN1P23142 703 aa17.67■□□□□ 0.42
TOP1MT-217ENST00000523417 STK32BQ9NY57 414 aa17.67■□□□□ 0.42
TOP1MT-217ENST00000523417 RTL1A6NKG5 1358 aa17.66■□□□□ 0.42
TOP1MT-217ENST00000523417 ACSBG1Q96GR2 724 aa17.66■□□□□ 0.42
TOP1MT-217ENST00000523417 LTV1Q96GA3 475 aaPredicted RBP17.65■□□□□ 0.42
TOP1MT-217ENST00000523417 GGNBP2Q9H3C7 697 aa17.65■□□□□ 0.42
TOP1MT-217ENST00000523417 LTN1O94822 1766 aa17.65■□□□□ 0.42
TOP1MT-217ENST00000523417 CGNL1Q0VF96 1302 aa17.65■□□□□ 0.42
TOP1MT-217ENST00000523417 KIF24Q5T7B8 1368 aa17.65■□□□□ 0.42
TOP1MT-217ENST00000523417 CARD14Q9BXL6 1004 aa17.64■□□□□ 0.41
TOP1MT-217ENST00000523417 PTGER2P43116 358 aa17.63■□□□□ 0.41
TOP1MT-217ENST00000523417 NBPF6Q5VWK0 638 aa17.63■□□□□ 0.41
TOP1MT-217ENST00000523417 ZCRB1Q8TBF4 217 aaKnown RBP17.63■□□□□ 0.41
TOP1MT-217ENST00000523417 DDX54Q8TDD1 881 aaKnown RBP17.63■□□□□ 0.41
TOP1MT-217ENST00000523417 NBPF4Q96M43 638 aa17.63■□□□□ 0.41
TOP1MT-217ENST00000523417 PDGFDQ9GZP0 370 aaPredicted RBP17.63■□□□□ 0.41
TOP1MT-217ENST00000523417 PPP1R1BQ9UD71 204 aaPredicted RBP17.63■□□□□ 0.41
TOP1MT-217ENST00000523417 RRS1Q15050 365 aaKnown RBP17.62■□□□□ 0.41
TOP1MT-217ENST00000523417 SLC27A3Q5K4L6 730 aa17.62■□□□□ 0.41
TOP1MT-217ENST00000523417 LRRC4BQ9NT99 713 aa17.61■□□□□ 0.41
TOP1MT-217ENST00000523417 INSRP06213 1382 aa17.61■□□□□ 0.41
TOP1MT-217ENST00000523417 SGIP1Q9BQI5 828 aa17.6■□□□□ 0.41
TOP1MT-217ENST00000523417 MTFR1LQ9H019 292 aa17.6■□□□□ 0.41
TOP1MT-217ENST00000523417 NHSQ6T4R5 1651 aa17.6■□□□□ 0.41
TOP1MT-217ENST00000523417 ZBTB7AO95365 584 aa17.58■□□□□ 0.4
TOP1MT-217ENST00000523417 PRIM1P49642 420 aaKnown RBP17.58■□□□□ 0.4
TOP1MT-217ENST00000523417 HSP90AB2PQ58FF8 381 aa17.58■□□□□ 0.4
TOP1MT-217ENST00000523417 AKT1S1Q96B36 256 aa17.58■□□□□ 0.4
TOP1MT-217ENST00000523417 CASZ1Q86V15 1759 aa17.58■□□□□ 0.4
TOP1MT-217ENST00000523417 FAM208AQ9UK61 1670 aaKnown RBP17.58■□□□□ 0.4
TOP1MT-217ENST00000523417 FLT4P35916 1363 aa17.57■□□□□ 0.4
TOP1MT-217ENST00000523417 SLC16A10Q8TF71 515 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms