RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 WDR17Q8IZU2 1322 aa32.8■■■□□ 2.84
PVT1-218ENST00000523328 CPSF1Q10570 1443 aaKnown RBP32.8■■■□□ 2.84
PVT1-218ENST00000523328 AKAP12Q02952 1782 aa32.8■■■□□ 2.84
PVT1-218ENST00000523328 EVC2Q86UK5 1308 aa32.78■■■□□ 2.84
PVT1-218ENST00000523328 PTF1AQ7RTS3 328 aa32.78■■■□□ 2.84
PVT1-218ENST00000523328 L3MBTL2Q969R5 705 aa32.77■■■□□ 2.84
PVT1-218ENST00000523328 BCL11BQ9C0K0 894 aaPredicted RBP32.77■■■□□ 2.84
PVT1-218ENST00000523328 CASZ1Q86V15 1759 aa32.77■■■□□ 2.84
PVT1-218ENST00000523328 ARHGEF25Q86VW2 580 aa32.76■■■□□ 2.83
PVT1-218ENST00000523328 ANO8Q9HCE9 1232 aaPredicted RBP32.76■■■□□ 2.83
PVT1-218ENST00000523328 PPP1R1BQ9UD71 204 aaPredicted RBP32.76■■■□□ 2.83
PVT1-218ENST00000523328 BCL9O00512 1426 aa32.76■■■□□ 2.83
PVT1-218ENST00000523328 MARCH10Q8NA82 808 aaPredicted RBP32.75■■■□□ 2.83
PVT1-218ENST00000523328 TTC21BQ7Z4L5 1316 aa32.75■■■□□ 2.83
PVT1-218ENST00000523328 NINLQ9Y2I6 1382 aa32.73■■■□□ 2.83
PVT1-218ENST00000523328 CDCA7Q9BWT1 371 aaPredicted RBP32.73■■■□□ 2.83
PVT1-218ENST00000523328 YY1P25490 414 aa32.72■■■□□ 2.83
PVT1-218ENST00000523328 ZNF692Q9BU19 519 aaPredicted RBP32.72■■■□□ 2.83
PVT1-218ENST00000523328 PROM2Q8N271 834 aa32.71■■■□□ 2.83
PVT1-218ENST00000523328 KCNH5Q8NCM2 988 aa32.71■■■□□ 2.83
PVT1-218ENST00000523328 NFAT5O94916 1531 aa32.7■■■□□ 2.83
PVT1-218ENST00000523328 CARD10Q9BWT7 1032 aa32.69■■■□□ 2.82
PVT1-218ENST00000523328 TTC21AQ8NDW8 1320 aa32.68■■■□□ 2.82
PVT1-218ENST00000523328 SOX12O15370 315 aa32.66■■■□□ 2.82
PVT1-218ENST00000523328 PDGFDQ9GZP0 370 aaPredicted RBP32.66■■■□□ 2.82
PVT1-218ENST00000523328 ROCK2O75116 1388 aaKnown RBP32.64■■■□□ 2.82
PVT1-218ENST00000523328 ABCC6O95255 1503 aa32.64■■■□□ 2.82
PVT1-218ENST00000523328 CSB-PGBD3P0DP91 1061 aa32.64■■■□□ 2.82
PVT1-218ENST00000523328 MON2Q7Z3U7 1717 aa32.63■■■□□ 2.81
PVT1-218ENST00000523328 SIN3AQ96ST3 1273 aa32.62■■■□□ 2.81
PVT1-218ENST00000523328 CCDC7Q96M83 1385 aa32.61■■■□□ 2.81
PVT1-218ENST00000523328 KTN1Q86UP2 1357 aaKnown RBP32.6■■■□□ 2.81
PVT1-218ENST00000523328 EXOC5O00471 708 aa32.6■■■□□ 2.81
PVT1-218ENST00000523328 TXNRD1Q16881 649 aa32.6■■■□□ 2.81
PVT1-218ENST00000523328 TNS2Q63HR2 1409 aa32.6■■■□□ 2.81
PVT1-218ENST00000523328 MYOM1P52179 1685 aa32.59■■■□□ 2.81
PVT1-218ENST00000523328 DCAF8L1A6NGE4 600 aa32.58■■■□□ 2.81
PVT1-218ENST00000523328 USP54Q70EL1 1684 aa32.58■■■□□ 2.81
PVT1-218ENST00000523328 ZBTB7AO95365 584 aa32.57■■■□□ 2.8
PVT1-218ENST00000523328 PTGER2P43116 358 aa32.56■■■□□ 2.8
PVT1-218ENST00000523328 NHSQ6T4R5 1651 aa32.56■■■□□ 2.8
PVT1-218ENST00000523328 USP31Q70CQ4 1352 aa32.54■■■□□ 2.8
PVT1-218ENST00000523328 SLC15A2Q16348 729 aa32.53■■■□□ 2.8
PVT1-218ENST00000523328 STK32BQ9NY57 414 aa32.53■■■□□ 2.8
PVT1-218ENST00000523328 LTN1O94822 1766 aa32.53■■■□□ 2.8
PVT1-218ENST00000523328 SBNO2Q9Y2G9 1366 aa32.52■■■□□ 2.8
PVT1-218ENST00000523328 CD163L1Q9NR16 1453 aa32.51■■■□□ 2.79
PVT1-218ENST00000523328 ATF5Q9Y2D1 282 aaPredicted RBP32.51■■■□□ 2.79
PVT1-218ENST00000523328 ERBB3P21860 1342 aa32.51■■■□□ 2.79
PVT1-218ENST00000523328 NEUROD1Q13562 356 aa32.5■■■□□ 2.79
PVT1-218ENST00000523328 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.5■■■□□ 2.79
PVT1-218ENST00000523328 NME9Q86XW9 330 aa32.47■■■□□ 2.79
PVT1-218ENST00000523328 PAPPAQ13219 1627 aa32.47■■■□□ 2.79
PVT1-218ENST00000523328 BTAF1O14981 1849 aa32.45■■■□□ 2.79
PVT1-218ENST00000523328 ACSBG1Q96GR2 724 aa32.45■■■□□ 2.79
PVT1-218ENST00000523328 NLRP2Q9NX02 1062 aa32.45■■■□□ 2.79
PVT1-218ENST00000523328 SGIP1Q9BQI5 828 aa32.44■■■□□ 2.78
PVT1-218ENST00000523328 KAT6BQ8WYB5 2073 aa32.43■■■□□ 2.78
PVT1-218ENST00000523328 MTFR1LQ9H019 292 aa32.43■■■□□ 2.78
PVT1-218ENST00000523328 UTRNP46939 3433 aa32.42■■■□□ 2.78
PVT1-218ENST00000523328 IL2RBP14784 551 aa32.42■■■□□ 2.78
PVT1-218ENST00000523328 FHDC1Q9C0D6 1143 aaPredicted RBP32.42■■■□□ 2.78
PVT1-218ENST00000523328 SYT17Q9BSW7 474 aa32.41■■■□□ 2.78
PVT1-218ENST00000523328 ANKRD24Q8TF21 1146 aa32.39■■■□□ 2.78
PVT1-218ENST00000523328 EDC4Q6P2E9 1401 aaKnown RBP32.37■■■□□ 2.77
PVT1-218ENST00000523328 SLC12A5Q9H2X9 1139 aa32.37■■■□□ 2.77
PVT1-218ENST00000523328 TMC1Q8TDI8 760 aa32.36■■■□□ 2.77
PVT1-218ENST00000523328 CARD11Q9BXL7 1154 aa32.36■■■□□ 2.77
PVT1-218ENST00000523328 HDGFL2Q7Z4V5 671 aaPredicted RBP32.35■■■□□ 2.77
PVT1-218ENST00000523328 CHD4Q14839 1912 aa32.34■■■□□ 2.77
PVT1-218ENST00000523328 A0A1W2PP64 1363 aa32.33■■■□□ 2.77
PVT1-218ENST00000523328 ZNF827Q17R98 1081 aa32.32■■■□□ 2.76
PVT1-218ENST00000523328 LRRC4BQ9NT99 713 aa32.32■■■□□ 2.76
PVT1-218ENST00000523328 FAM208AQ9UK61 1670 aaKnown RBP32.31■■■□□ 2.76
PVT1-218ENST00000523328 ZNF784Q8NCA9 323 aaPredicted RBP32.3■■■□□ 2.76
PVT1-218ENST00000523328 ARXQ96QS3 562 aa32.29■■■□□ 2.76
PVT1-218ENST00000523328 TERF2IPQ9NYB0 399 aa32.28■■■□□ 2.76
PVT1-218ENST00000523328 MAP3K5Q99683 1374 aa32.28■■■□□ 2.76
PVT1-218ENST00000523328 QSER1Q2KHR3 1735 aa32.28■■■□□ 2.76
PVT1-218ENST00000523328 IP6K1Q92551 441 aa32.27■■■□□ 2.76
PVT1-218ENST00000523328 PUS7Q96PZ0 661 aaKnown RBP32.26■■■□□ 2.75
PVT1-218ENST00000523328 AKT1S1Q96B36 256 aa32.24■■■□□ 2.75
PVT1-218ENST00000523328 COL24A1Q17RW2 1714 aa32.23■■■□□ 2.75
PVT1-218ENST00000523328 DDX54Q8TDD1 881 aaKnown RBP32.22■■■□□ 2.75
PVT1-218ENST00000523328 TUBGCP6Q96RT7 1819 aa32.21■■■□□ 2.75
PVT1-218ENST00000523328 RGPD2P0DJD1 1756 aa32.2■■■□□ 2.75
PVT1-218ENST00000523328 SLC27A3Q5K4L6 730 aa32.2■■■□□ 2.75
PVT1-218ENST00000523328 LTV1Q96GA3 475 aaPredicted RBP32.2■■■□□ 2.75
PVT1-218ENST00000523328 DOT1LQ8TEK3 1739 aa32.2■■■□□ 2.74
PVT1-218ENST00000523328 SHANK3Q9BYB0 1731 aa32.2■■■□□ 2.74
PVT1-218ENST00000523328 LY75O60449 1722 aa32.18■■■□□ 2.74
PVT1-218ENST00000523328 SLC16A10Q8TF71 515 aa32.18■■■□□ 2.74
PVT1-218ENST00000523328 MAP3K19Q56UN5 1328 aa32.16■■■□□ 2.74
PVT1-218ENST00000523328 PNPLA7Q6ZV29 1317 aa32.16■■■□□ 2.74
PVT1-218ENST00000523328 HOXC9P31274 260 aa32.15■■■□□ 2.74
PVT1-218ENST00000523328 TESK2Q96S53 571 aa32.15■■■□□ 2.74
PVT1-218ENST00000523328 ANKRD36BQ8N2N9 1353 aa32.15■■■□□ 2.74
PVT1-218ENST00000523328 NSD2O96028 1365 aa32.14■■■□□ 2.74
PVT1-218ENST00000523328 FBLN1P23142 703 aa32.13■■■□□ 2.73
PVT1-218ENST00000523328 PRIM1P49642 420 aaKnown RBP32.13■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms