RNA–Protein interactions for RNA: ENST00000522468.1

HMBOX1-209, Transcript of homeobox containing 1, humanhuman

TSL 3

Gene HMBOX1, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-209ENST00000522468 ARHGEF25Q86VW2 580 aa20.11■□□□□ 0.81
HMBOX1-209ENST00000522468 ABCC6O95255 1503 aa20.1■□□□□ 0.81
HMBOX1-209ENST00000522468 WDR17Q8IZU2 1322 aa20.09■□□□□ 0.81
HMBOX1-209ENST00000522468 KTN1Q86UP2 1357 aaKnown RBP20.08■□□□□ 0.81
HMBOX1-209ENST00000522468 RGPD3A6NKT7 1758 aaPredicted RBP20.08■□□□□ 0.81
HMBOX1-209ENST00000522468 RGPD4Q7Z3J3 1758 aa20.08■□□□□ 0.81
HMBOX1-209ENST00000522468 APBA3O96018 575 aa20.08■□□□□ 0.81
HMBOX1-209ENST00000522468 R3HDM1Q15032 1099 aaKnown RBP20.08■□□□□ 0.81
HMBOX1-209ENST00000522468 ZBTB7CA1YPR0 619 aa20.07■□□□□ 0.8
HMBOX1-209ENST00000522468 KCNH5Q8NCM2 988 aa20.07■□□□□ 0.8
HMBOX1-209ENST00000522468 CARD11Q9BXL7 1154 aa20.07■□□□□ 0.8
HMBOX1-209ENST00000522468 OVOS2A0A0G2JMS6 1433 aa20.07■□□□□ 0.8
HMBOX1-209ENST00000522468 OVOS2A0A0J9YW53 1432 aa20.07■□□□□ 0.8
HMBOX1-209ENST00000522468 OVOS2Q6IE36 1432 aa20.07■□□□□ 0.8
HMBOX1-209ENST00000522468 USP31Q70CQ4 1352 aa20.07■□□□□ 0.8
HMBOX1-209ENST00000522468 TOM1L2Q6ZVM7 507 aa20.05■□□□□ 0.8
HMBOX1-209ENST00000522468 LTN1O94822 1766 aa20.04■□□□□ 0.8
HMBOX1-209ENST00000522468 C11orf95C9JLR9 678 aaPredicted RBP20.04■□□□□ 0.8
HMBOX1-209ENST00000522468 BCL9O00512 1426 aa20.03■□□□□ 0.8
HMBOX1-209ENST00000522468 TONSLQ96HA7 1378 aa20.03■□□□□ 0.8
HMBOX1-209ENST00000522468 DDB1Q16531 1140 aa20.02■□□□□ 0.8
HMBOX1-209ENST00000522468 CARD10Q9BWT7 1032 aa20.02■□□□□ 0.8
HMBOX1-209ENST00000522468 SOX12O15370 315 aa20■□□□□ 0.79
HMBOX1-209ENST00000522468 MARCH10Q8NA82 808 aaPredicted RBP20■□□□□ 0.79
HMBOX1-209ENST00000522468 PUS7Q96PZ0 661 aaKnown RBP20■□□□□ 0.79
HMBOX1-209ENST00000522468 CDCA7Q9BWT1 371 aaPredicted RBP20■□□□□ 0.79
HMBOX1-209ENST00000522468 EDC4Q6P2E9 1401 aaKnown RBP20■□□□□ 0.79
HMBOX1-209ENST00000522468 NME9Q86XW9 330 aa19.99■□□□□ 0.79
HMBOX1-209ENST00000522468 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.99■□□□□ 0.792e-6■■□□□ 12.1
HMBOX1-209ENST00000522468 SLC12A5Q9H2X9 1139 aa19.99■□□□□ 0.79
HMBOX1-209ENST00000522468 A0A1W2PP64 1363 aa19.98■□□□□ 0.79
HMBOX1-209ENST00000522468 PTF1AQ7RTS3 328 aa19.98■□□□□ 0.79
HMBOX1-209ENST00000522468 TESK2Q96S53 571 aa19.98■□□□□ 0.79
HMBOX1-209ENST00000522468 CCDC7Q96M83 1385 aa19.97■□□□□ 0.79
HMBOX1-209ENST00000522468 PLSCR1O15162 318 aa19.96■□□□□ 0.79
HMBOX1-209ENST00000522468 BCL11BQ9C0K0 894 aaPredicted RBP19.96■□□□□ 0.79
HMBOX1-209ENST00000522468 ERBB3P21860 1342 aa19.96■□□□□ 0.79
HMBOX1-209ENST00000522468 TNS2Q63HR2 1409 aa19.95■□□□□ 0.78
HMBOX1-209ENST00000522468 TMC1Q8TDI8 760 aa19.95■□□□□ 0.78
HMBOX1-209ENST00000522468 CSB-PGBD3P0DP91 1061 aa19.94■□□□□ 0.78
HMBOX1-209ENST00000522468 HDGFL2Q7Z4V5 671 aaPredicted RBP19.94■□□□□ 0.78
HMBOX1-209ENST00000522468 NBPF14Q5TI25 921 aa19.93■□□□□ 0.78
HMBOX1-209ENST00000522468 TERF2IPQ9NYB0 399 aa19.93■□□□□ 0.78
HMBOX1-209ENST00000522468 CASZ1Q86V15 1759 aa19.93■□□□□ 0.78
HMBOX1-209ENST00000522468 NHSQ6T4R5 1651 aa19.92■□□□□ 0.78
HMBOX1-209ENST00000522468 PROM2Q8N271 834 aa19.92■□□□□ 0.78
HMBOX1-209ENST00000522468 NINLQ9Y2I6 1382 aa19.92■□□□□ 0.78
HMBOX1-209ENST00000522468 ST20-MTHFSA0A0A6YYL1 179 aa19.91■□□□□ 0.78
HMBOX1-209ENST00000522468 EXOC5O00471 708 aa19.9■□□□□ 0.78
HMBOX1-209ENST00000522468 FAM208AQ9UK61 1670 aaKnown RBP19.9■□□□□ 0.78
HMBOX1-209ENST00000522468 ANO8Q9HCE9 1232 aaPredicted RBP19.89■□□□□ 0.77
HMBOX1-209ENST00000522468 TRIM26Q12899 539 aaPredicted RBP19.87■□□□□ 0.77
HMBOX1-209ENST00000522468 ANKRD24Q8TF21 1146 aa19.87■□□□□ 0.77
HMBOX1-209ENST00000522468 NLRP2Q9NX02 1062 aa19.86■□□□□ 0.77
HMBOX1-209ENST00000522468 IP6K1Q92551 441 aa19.85■□□□□ 0.77
HMBOX1-209ENST00000522468 BTAF1O14981 1849 aa19.85■□□□□ 0.77
HMBOX1-209ENST00000522468 KCNQ2O43526 872 aa19.84■□□□□ 0.77
HMBOX1-209ENST00000522468 SLC24A1O60721 1099 aa19.84■□□□□ 0.77
HMBOX1-209ENST00000522468 IL2RBP14784 551 aa19.84■□□□□ 0.77
HMBOX1-209ENST00000522468 PAPPAQ13219 1627 aa19.84■□□□□ 0.77
HMBOX1-209ENST00000522468 ANKRD36BQ8N2N9 1353 aa19.83■□□□□ 0.77
HMBOX1-209ENST00000522468 RGPD2P0DJD1 1756 aa19.83■□□□□ 0.77
HMBOX1-209ENST00000522468 USP47Q96K76 1375 aa19.83■□□□□ 0.76
HMBOX1-209ENST00000522468 TXNRD1Q16881 649 aa19.82■□□□□ 0.76
HMBOX1-209ENST00000522468 SPON1Q9HCB6 807 aa19.82■□□□□ 0.76
HMBOX1-209ENST00000522468 SHANK3Q9BYB0 1731 aa19.82■□□□□ 0.76
HMBOX1-209ENST00000522468 PDGFDQ9GZP0 370 aaPredicted RBP19.81■□□□□ 0.76
HMBOX1-209ENST00000522468 MAP3K19Q56UN5 1328 aa19.8■□□□□ 0.76
HMBOX1-209ENST00000522468 UTRNP46939 3433 aa19.79■□□□□ 0.76
HMBOX1-209ENST00000522468 MYOM1P52179 1685 aa19.79■□□□□ 0.76
HMBOX1-209ENST00000522468 COG3Q96JB2 828 aa19.79■□□□□ 0.76
HMBOX1-209ENST00000522468 FBLN1P23142 703 aa19.78■□□□□ 0.76
HMBOX1-209ENST00000522468 HOXC9P31274 260 aa19.78■□□□□ 0.76
HMBOX1-209ENST00000522468 ACSBG1Q96GR2 724 aa19.78■□□□□ 0.76
HMBOX1-209ENST00000522468 KAT6BQ8WYB5 2073 aa19.78■□□□□ 0.76
HMBOX1-209ENST00000522468 KIF20BQ96Q89 1820 aa19.78■□□□□ 0.76
HMBOX1-209ENST00000522468 RTL1A6NKG5 1358 aa19.76■□□□□ 0.75
HMBOX1-209ENST00000522468 FYB1O15117 783 aa19.76■□□□□ 0.75
HMBOX1-209ENST00000522468 TMF1P82094 1093 aa19.76■□□□□ 0.75
HMBOX1-209ENST00000522468 SLC15A2Q16348 729 aa19.76■□□□□ 0.75
HMBOX1-209ENST00000522468 DOT1LQ8TEK3 1739 aa19.74■□□□□ 0.75
HMBOX1-209ENST00000522468 PTGER2P43116 358 aa19.74■□□□□ 0.75
HMBOX1-209ENST00000522468 LTV1Q96GA3 475 aaPredicted RBP19.74■□□□□ 0.75
HMBOX1-209ENST00000522468 MEGF6O75095 1541 aa19.74■□□□□ 0.75
HMBOX1-209ENST00000522468 STK32BQ9NY57 414 aa19.73■□□□□ 0.75
HMBOX1-209ENST00000522468 QSER1Q2KHR3 1735 aa19.72■□□□□ 0.75
HMBOX1-209ENST00000522468 PPP1R1BQ9UD71 204 aaPredicted RBP19.72■□□□□ 0.75
HMBOX1-209ENST00000522468 LY75O60449 1722 aa19.71■□□□□ 0.75
HMBOX1-209ENST00000522468 ZBTB7AO95365 584 aa19.71■□□□□ 0.75
HMBOX1-209ENST00000522468 AMPHP49418 695 aa19.71■□□□□ 0.75
HMBOX1-209ENST00000522468 RRS1Q15050 365 aaKnown RBP19.71■□□□□ 0.75
HMBOX1-209ENST00000522468 GGNBP2Q9H3C7 697 aa19.71■□□□□ 0.75
HMBOX1-209ENST00000522468 LRRC4BQ9NT99 713 aa19.71■□□□□ 0.75
HMBOX1-209ENST00000522468 SGIP1Q9BQI5 828 aa19.7■□□□□ 0.74
HMBOX1-209ENST00000522468 TIMELESSQ9UNS1 1208 aa19.7■□□□□ 0.74
HMBOX1-209ENST00000522468 NSD2O96028 1365 aa19.7■□□□□ 0.74
HMBOX1-209ENST00000522468 ANKRD26Q9UPS8 1709 aa19.69■□□□□ 0.74
HMBOX1-209ENST00000522468 DDX54Q8TDD1 881 aaKnown RBP19.69■□□□□ 0.74
HMBOX1-209ENST00000522468 COL24A1Q17RW2 1714 aa19.68■□□□□ 0.74
HMBOX1-209ENST00000522468 TUBGCP6Q96RT7 1819 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms