RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 RGPD1P0DJD0 1748 aa33.35■■■□□ 2.93
COL13A1-214ENST00000522165 TCERG1O14776 1098 aaKnown RBP33.35■■■□□ 2.93
COL13A1-214ENST00000522165 CALD1Q05682 793 aaKnown RBP33.35■■■□□ 2.93
COL13A1-214ENST00000522165 SBNO1A3KN83 1393 aa33.35■■■□□ 2.93
COL13A1-214ENST00000522165 PHF8Q9UPP1 1060 aa33.35■■■□□ 2.93
COL13A1-214ENST00000522165 USP54Q70EL1 1684 aa33.34■■■□□ 2.93
COL13A1-214ENST00000522165 NLRP6P59044 892 aa33.33■■■□□ 2.93
COL13A1-214ENST00000522165 SULT6B1Q6IMI4 303 aa33.33■■■□□ 2.93
COL13A1-214ENST00000522165 AEBP1Q8IUX7 1158 aa33.33■■■□□ 2.93
COL13A1-214ENST00000522165 COG6Q9Y2V7 657 aa33.33■■■□□ 2.93
COL13A1-214ENST00000522165 DLG5Q8TDM6 1919 aa33.33■■■□□ 2.93
COL13A1-214ENST00000522165 LMOD3Q0VAK6 560 aa33.33■■■□□ 2.93
COL13A1-214ENST00000522165 FLT4P35916 1363 aa33.33■■■□□ 2.93
COL13A1-214ENST00000522165 MARF1Q9Y4F3 1742 aaKnown RBP33.32■■■□□ 2.92
COL13A1-214ENST00000522165 NWD1Q149M9 1564 aa33.32■■■□□ 2.92
COL13A1-214ENST00000522165 THUMPD2Q9BTF0 503 aaKnown RBP33.3■■■□□ 2.92
COL13A1-214ENST00000522165 RLBP1P12271 317 aa33.29■■■□□ 2.92
COL13A1-214ENST00000522165 SMC4Q9NTJ3 1288 aa33.29■■■□□ 2.92
COL13A1-214ENST00000522165 TNNQ9UQP3 1299 aa33.29■■■□□ 2.92
COL13A1-214ENST00000522165 SSH1Q8WYL5 1049 aa33.29■■■□□ 2.92
COL13A1-214ENST00000522165 IFT57Q9NWB7 429 aa33.29■■■□□ 2.92
COL13A1-214ENST00000522165 ZKSCAN2Q63HK3 967 aa33.27■■■□□ 2.92
COL13A1-214ENST00000522165 CLUAP1Q96AJ1 413 aa33.27■■■□□ 2.92
COL13A1-214ENST00000522165 ARHGEF10O15013 1369 aa33.27■■■□□ 2.92
COL13A1-214ENST00000522165 GNAI1P63096 354 aa33.27■■■□□ 2.92
COL13A1-214ENST00000522165 MYT1Q01538 1121 aa33.27■■■□□ 2.92
COL13A1-214ENST00000522165 ABTB2Q8N961 1025 aa33.27■■■□□ 2.92
COL13A1-214ENST00000522165 ZNF853P0CG23 659 aa33.26■■■□□ 2.92
COL13A1-214ENST00000522165 LAS1LQ9Y4W2 734 aaKnown RBP33.26■■■□□ 2.92
COL13A1-214ENST00000522165 AMPHP49418 695 aa33.25■■■□□ 2.91
COL13A1-214ENST00000522165 AAMPQ13685 434 aa33.25■■■□□ 2.91
COL13A1-214ENST00000522165 PAK3O75914 559 aaPredicted RBP33.25■■■□□ 2.91
COL13A1-214ENST00000522165 MS4A1P11836 297 aa33.25■■■□□ 2.91
COL13A1-214ENST00000522165 NUTM2GQ5VZR2 741 aa33.25■■■□□ 2.91
COL13A1-214ENST00000522165 KIF24Q5T7B8 1368 aa33.23■■■□□ 2.91
COL13A1-214ENST00000522165 C14orf37Q86TY3 774 aa33.23■■■□□ 2.91
COL13A1-214ENST00000522165 ESCO1Q5FWF5 840 aa33.22■■■□□ 2.91
COL13A1-214ENST00000522165 ALDH1L2Q3SY69 923 aa33.21■■■□□ 2.91
COL13A1-214ENST00000522165 ZNF428Q96B54 188 aa33.21■■■□□ 2.91
COL13A1-214ENST00000522165 FAM83GA6ND36 823 aa33.21■■■□□ 2.91
COL13A1-214ENST00000522165 CFAP44Q96MT7 982 aa33.21■■■□□ 2.91
COL13A1-214ENST00000522165 DZIP1LQ8IYY4 767 aaKnown RBP33.2■■■□□ 2.91
COL13A1-214ENST00000522165 SKAP1Q86WV1 359 aa33.19■■■□□ 2.9
COL13A1-214ENST00000522165 MBIPQ9NS73 344 aa33.19■■■□□ 2.9
COL13A1-214ENST00000522165 KDRP35968 1356 aa33.18■■■□□ 2.9
COL13A1-214ENST00000522165 IGSF1Q8N6C5 1336 aa33.17■■■□□ 2.9
COL13A1-214ENST00000522165 MVPQ14764 893 aaKnown RBP33.17■■■□□ 2.9
COL13A1-214ENST00000522165 FTSJ3Q8IY81 847 aaKnown RBP33.17■■■□□ 2.9
COL13A1-214ENST00000522165 TRIM27P14373 513 aa33.16■■■□□ 2.9
COL13A1-214ENST00000522165 HOXC9P31274 260 aa33.16■■■□□ 2.9
COL13A1-214ENST00000522165 PSME1Q06323 249 aa33.16■■■□□ 2.9
COL13A1-214ENST00000522165 IGHDP01880 384 aa33.16■■■□□ 2.9
COL13A1-214ENST00000522165 DCTN1Q14203 1278 aa33.16■■■□□ 2.9
COL13A1-214ENST00000522165 ATF7IPQ6VMQ6 1270 aa33.16■■■□□ 2.9
COL13A1-214ENST00000522165 PROSER2Q86WR7 435 aaPredicted RBP33.16■■■□□ 2.9
COL13A1-214ENST00000522165 NOB1Q9ULX3 412 aaKnown RBP33.16■■■□□ 2.9
COL13A1-214ENST00000522165 KIF16BQ96L93 1317 aa33.15■■■□□ 2.9
COL13A1-214ENST00000522165 EYA1Q99502 592 aa33.15■■■□□ 2.9
COL13A1-214ENST00000522165 VAMP4O75379 141 aa33.14■■■□□ 2.9
COL13A1-214ENST00000522165 BRPF1P55201 1214 aaPredicted RBP33.14■■■□□ 2.9
COL13A1-214ENST00000522165 IPO8O15397 1037 aaKnown RBP33.11■■■□□ 2.89
COL13A1-214ENST00000522165 PDE4AP27815 886 aa33.11■■■□□ 2.89
COL13A1-214ENST00000522165 TSPYL6Q8N831 410 aa33.11■■■□□ 2.89
COL13A1-214ENST00000522165 ORAI2Q96SN7 254 aa33.11■■■□□ 2.89
COL13A1-214ENST00000522165 RTL1A6NKG5 1358 aa33.1■■■□□ 2.89
COL13A1-214ENST00000522165 NFAT5O94916 1531 aa33.08■■■□□ 2.89
COL13A1-214ENST00000522165 PCDHB15Q9Y5E8 787 aa33.08■■■□□ 2.89
COL13A1-214ENST00000522165 BACH2Q9BYV9 841 aa33.08■■■□□ 2.89
COL13A1-214ENST00000522165 LTN1O94822 1766 aa33.06■■■□□ 2.88
COL13A1-214ENST00000522165 MTHFSDQ2M296 383 aaKnown RBP33.06■■■□□ 2.88
COL13A1-214ENST00000522165 TWISTNBQ3B726 338 aaPredicted RBP33.06■■■□□ 2.88
COL13A1-214ENST00000522165 MCM10Q7L590 875 aa33.06■■■□□ 2.88
COL13A1-214ENST00000522165 C19orf44Q9H6X5 657 aa33.06■■■□□ 2.88
COL13A1-214ENST00000522165 C8orf58Q8NAV2 365 aa33.05■■■□□ 2.88
COL13A1-214ENST00000522165 MRPL50Q8N5N7 158 aaKnown RBP33.05■■■□□ 2.88
COL13A1-214ENST00000522165 FOXO3O43524 673 aa33.04■■■□□ 2.88
COL13A1-214ENST00000522165 DDX19BQ9UMR2 479 aa33.04■■■□□ 2.88
COL13A1-214ENST00000522165 CHL1O00533 1208 aa33.03■■■□□ 2.88
COL13A1-214ENST00000522165 ELL2O00472 640 aaPredicted RBP33.03■■■□□ 2.88
COL13A1-214ENST00000522165 C1orf167Q5SNV9 1468 aa33.03■■■□□ 2.88
COL13A1-214ENST00000522165 KCNH5Q8NCM2 988 aa33.02■■■□□ 2.88
COL13A1-214ENST00000522165 ITPRIPQ8IWB1 547 aa33.01■■■□□ 2.88
COL13A1-214ENST00000522165 GAS2L2Q8NHY3 880 aa33.01■■■□□ 2.88
COL13A1-214ENST00000522165 IP6K1Q92551 441 aa33.01■■■□□ 2.88
COL13A1-214ENST00000522165 CRB1P82279 1406 aa33.01■■■□□ 2.88
COL13A1-214ENST00000522165 TMEM57Q8N5G2 664 aa33.01■■■□□ 2.87
COL13A1-214ENST00000522165 ARHGAP45Q92619 1136 aa33■■■□□ 2.87
COL13A1-214ENST00000522165 KIF1AQ12756 1690 aa32.99■■■□□ 2.87
COL13A1-214ENST00000522165 MSH5O43196 834 aa32.99■■■□□ 2.87
COL13A1-214ENST00000522165 LTV1Q96GA3 475 aaPredicted RBP32.98■■■□□ 2.87
COL13A1-214ENST00000522165 STRCP1A6NGW2 1772 aa32.98■■■□□ 2.87
COL13A1-214ENST00000522165 XPCQ01831 940 aaPredicted RBP32.98■■■□□ 2.87
COL13A1-214ENST00000522165 TRPM3Q9HCF6 1732 aaPredicted RBP32.97■■■□□ 2.87
COL13A1-214ENST00000522165 PHRF1Q9P1Y6 1649 aaKnown RBP32.97■■■□□ 2.87
COL13A1-214ENST00000522165 RTF1Q92541 710 aaKnown RBP32.97■■■□□ 2.87
COL13A1-214ENST00000522165 RWDD1Q9H446 243 aaPredicted RBP32.97■■■□□ 2.87
COL13A1-214ENST00000522165 RGS3P49796 1198 aa32.96■■■□□ 2.87
COL13A1-214ENST00000522165 TMEM94Q12767 1356 aa32.96■■■□□ 2.87
COL13A1-214ENST00000522165 SLIT3O75094 1523 aa32.95■■■□□ 2.87
COL13A1-214ENST00000522165 KIAA0232Q92628 1395 aa32.95■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms