RNA–Protein interactions for RNA: ENST00000521545.6

LAPTM4B-203, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4B, Length 915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-203ENST00000521545 WDR17Q8IZU2 1322 aa36.48■■■■□ 3.43
LAPTM4B-203ENST00000521545 NME9Q86XW9 330 aa36.47■■■■□ 3.43
LAPTM4B-203ENST00000521545 USP31Q70CQ4 1352 aa36.47■■■■□ 3.43
LAPTM4B-203ENST00000521545 CSB-PGBD3P0DP91 1061 aa36.46■■■■□ 3.43
LAPTM4B-203ENST00000521545 EDC4Q6P2E9 1401 aaKnown RBP36.45■■■■□ 3.43
LAPTM4B-203ENST00000521545 NFAT5O94916 1531 aa36.44■■■■□ 3.42
LAPTM4B-203ENST00000521545 PCGF6Q9BYE7 350 aa36.43■■■■□ 3.42
LAPTM4B-203ENST00000521545 DISP2A7MBM2 1401 aa36.42■■■■□ 3.42
LAPTM4B-203ENST00000521545 A0A1W2PP64 1363 aa36.42■■■■□ 3.42
LAPTM4B-203ENST00000521545 NINLQ9Y2I6 1382 aa36.42■■■■□ 3.42
LAPTM4B-203ENST00000521545 C11orf95C9JLR9 678 aaPredicted RBP36.42■■■■□ 3.42
LAPTM4B-203ENST00000521545 APBA3O96018 575 aa36.41■■■■□ 3.42
LAPTM4B-203ENST00000521545 PARP4Q9UKK3 1724 aaKnown RBP36.41■■■■□ 3.42
LAPTM4B-203ENST00000521545 DDB1Q16531 1140 aa36.4■■■■□ 3.42
LAPTM4B-203ENST00000521545 TNS1Q9HBL0 1735 aaKnown RBP36.39■■■■□ 3.42
LAPTM4B-203ENST00000521545 CDCA7Q9BWT1 371 aaPredicted RBP36.39■■■■□ 3.42
LAPTM4B-203ENST00000521545 CARD10Q9BWT7 1032 aa36.39■■■■□ 3.42
LAPTM4B-203ENST00000521545 TIMELESSQ9UNS1 1208 aa36.39■■■■□ 3.42
LAPTM4B-203ENST00000521545 USP47Q96K76 1375 aa36.38■■■■□ 3.41
LAPTM4B-203ENST00000521545 EZH2Q15910 746 aaKnown RBP36.37■■■■□ 3.41
LAPTM4B-203ENST00000521545 RGPD5Q99666 1765 aa36.37■■■■□ 3.41
LAPTM4B-203ENST00000521545 CLSPNQ9HAW4 1339 aa36.36■■■■□ 3.41
LAPTM4B-203ENST00000521545 TMF1P82094 1093 aa36.36■■■■□ 3.41
LAPTM4B-203ENST00000521545 USP54Q70EL1 1684 aa36.35■■■■□ 3.41
LAPTM4B-203ENST00000521545 ABCC6O95255 1503 aa36.35■■■■□ 3.41
LAPTM4B-203ENST00000521545 SRCAPQ6ZRS2 3230 aa36.34■■■■□ 3.41
LAPTM4B-203ENST00000521545 CAMKK2Q96RR4 588 aa36.34■■■■□ 3.41
LAPTM4B-203ENST00000521545 PSDA5PKW4 1024 aaPredicted RBP36.32■■■■□ 3.4
LAPTM4B-203ENST00000521545 OVOS2A0A0G2JMS6 1433 aa36.31■■■■□ 3.4
LAPTM4B-203ENST00000521545 OVOS2A0A0J9YW53 1432 aa36.31■■■■□ 3.4
LAPTM4B-203ENST00000521545 OVOS2Q6IE36 1432 aa36.31■■■■□ 3.4
LAPTM4B-203ENST00000521545 PARD3Q8TEW0 1356 aa36.3■■■■□ 3.4
LAPTM4B-203ENST00000521545 CCDC7Q96M83 1385 aa36.29■■■■□ 3.4
LAPTM4B-203ENST00000521545 CDCA8Q53HL2 280 aa36.28■■■■□ 3.4
LAPTM4B-203ENST00000521545 LRRC37A3O60309 1634 aa36.27■■■■□ 3.4
LAPTM4B-203ENST00000521545 COG3Q96JB2 828 aa36.27■■■■□ 3.4
LAPTM4B-203ENST00000521545 EXOC5O00471 708 aa36.26■■■■□ 3.4
LAPTM4B-203ENST00000521545 NLRP2Q9NX02 1062 aa36.26■■■■□ 3.4
LAPTM4B-203ENST00000521545 ERBB3P21860 1342 aa36.25■■■■□ 3.39
LAPTM4B-203ENST00000521545 ANKRD36BQ8N2N9 1353 aa36.25■■■■□ 3.39
LAPTM4B-203ENST00000521545 R3HDM1Q15032 1099 aaKnown RBP36.24■■■■□ 3.39
LAPTM4B-203ENST00000521545 LTN1O94822 1766 aa36.24■■■■□ 3.39
LAPTM4B-203ENST00000521545 WNK3Q9BYP7 1800 aa36.24■■■■□ 3.39
LAPTM4B-203ENST00000521545 MARCH10Q8NA82 808 aaPredicted RBP36.23■■■■□ 3.39
LAPTM4B-203ENST00000521545 ANKRD24Q8TF21 1146 aa36.22■■■■□ 3.39
LAPTM4B-203ENST00000521545 PEAK1Q9H792 1746 aa36.2■■■■□ 3.39
LAPTM4B-203ENST00000521545 IP6K1Q92551 441 aa36.18■■■■□ 3.38
LAPTM4B-203ENST00000521545 NBPF14Q5TI25 921 aa36.17■■■■□ 3.38
LAPTM4B-203ENST00000521545 BCL11BQ9C0K0 894 aaPredicted RBP36.17■■■■□ 3.38
LAPTM4B-203ENST00000521545 IL2RBP14784 551 aa36.14■■■■□ 3.38
LAPTM4B-203ENST00000521545 BCL9O00512 1426 aa36.13■■■■□ 3.37
LAPTM4B-203ENST00000521545 PLSCR1O15162 318 aa36.12■■■■□ 3.37
LAPTM4B-203ENST00000521545 AMPHP49418 695 aa36.12■■■■□ 3.37
LAPTM4B-203ENST00000521545 CCER1Q8TC90 406 aaPredicted RBP36.12■■■■□ 3.37
LAPTM4B-203ENST00000521545 SBF2Q86WG5 1849 aa36.12■■■■□ 3.37
LAPTM4B-203ENST00000521545 RREB1Q92766 1687 aa36.11■■■■□ 3.37
LAPTM4B-203ENST00000521545 LTV1Q96GA3 475 aaPredicted RBP36.11■■■■□ 3.37
LAPTM4B-203ENST00000521545 TNS2Q63HR2 1409 aa36.1■■■■□ 3.37
LAPTM4B-203ENST00000521545 FYB1O15117 783 aa36.1■■■■□ 3.37
LAPTM4B-203ENST00000521545 MAP3K19Q56UN5 1328 aa36.09■■■■□ 3.37
LAPTM4B-203ENST00000521545 LRP5O75197 1615 aa36.09■■■■□ 3.37
LAPTM4B-203ENST00000521545 GGNBP2Q9H3C7 697 aa36.09■■■■□ 3.37
LAPTM4B-203ENST00000521545 FBLN1P23142 703 aa36.07■■■■□ 3.36
LAPTM4B-203ENST00000521545 HOXC9P31274 260 aa36.06■■■■□ 3.36
LAPTM4B-203ENST00000521545 PTF1AQ7RTS3 328 aa36.06■■■■□ 3.36
LAPTM4B-203ENST00000521545 NUP188Q5SRE5 1749 aa36.05■■■■□ 3.36
LAPTM4B-203ENST00000521545 RRS1Q15050 365 aaKnown RBP36■■■■□ 3.35
LAPTM4B-203ENST00000521545 FAM208AQ9UK61 1670 aaKnown RBP36■■■■□ 3.35
LAPTM4B-203ENST00000521545 RGPD3A6NKT7 1758 aaPredicted RBP35.99■■■■□ 3.35
LAPTM4B-203ENST00000521545 RGPD4Q7Z3J3 1758 aa35.99■■■■□ 3.35
LAPTM4B-203ENST00000521545 RTL1A6NKG5 1358 aa35.98■■■■□ 3.35
LAPTM4B-203ENST00000521545 KCNQ2O43526 872 aa35.96■■■■□ 3.35
LAPTM4B-203ENST00000521545 ACSBG1Q96GR2 724 aa35.96■■■■□ 3.35
LAPTM4B-203ENST00000521545 CARD14Q9BXL6 1004 aa35.96■■■■□ 3.35
LAPTM4B-203ENST00000521545 POLR3GLQ9BT43 218 aa35.95■■■■□ 3.35
LAPTM4B-203ENST00000521545 EIF4G2P78344 907 aaKnown RBP eCLIP35.94■■■■□ 3.34
LAPTM4B-203ENST00000521545 NSD3Q9BZ95 1437 aa35.93■■■■□ 3.34
LAPTM4B-203ENST00000521545 KIF20BQ96Q89 1820 aa35.93■■■■□ 3.34
LAPTM4B-203ENST00000521545 MYOM1P52179 1685 aa35.92■■■■□ 3.34
LAPTM4B-203ENST00000521545 PROM2Q8N271 834 aa35.92■■■■□ 3.34
LAPTM4B-203ENST00000521545 DDX54Q8TDD1 881 aaKnown RBP35.92■■■■□ 3.34
LAPTM4B-203ENST00000521545 TXNRD1Q16881 649 aa35.91■■■■□ 3.34
LAPTM4B-203ENST00000521545 SMG6Q86US8 1419 aaKnown RBP35.9■■■■□ 3.34
LAPTM4B-203ENST00000521545 NHSQ6T4R5 1651 aa35.88■■■■□ 3.33
LAPTM4B-203ENST00000521545 HSPA5P11021 654 aaKnown RBP35.86■■■■□ 3.33
LAPTM4B-203ENST00000521545 NBPF6Q5VWK0 638 aa35.86■■■■□ 3.33
LAPTM4B-203ENST00000521545 NBPF4Q96M43 638 aa35.86■■■■□ 3.33
LAPTM4B-203ENST00000521545 ZCRB1Q8TBF4 217 aaKnown RBP35.85■■■■□ 3.33
LAPTM4B-203ENST00000521545 ANO8Q9HCE9 1232 aaPredicted RBP35.85■■■■□ 3.33
LAPTM4B-203ENST00000521545 KIF24Q5T7B8 1368 aa35.85■■■■□ 3.33
LAPTM4B-203ENST00000521545 KAT6BQ8WYB5 2073 aa35.85■■■■□ 3.33
LAPTM4B-203ENST00000521545 CGNL1Q0VF96 1302 aa35.84■■■■□ 3.33
LAPTM4B-203ENST00000521545 HSP90AB2PQ58FF8 381 aa35.84■■■■□ 3.33
LAPTM4B-203ENST00000521545 INSRP06213 1382 aa35.84■■■■□ 3.33
LAPTM4B-203ENST00000521545 FLT4P35916 1363 aa35.84■■■■□ 3.33
LAPTM4B-203ENST00000521545 SPON1Q9HCB6 807 aa35.83■■■■□ 3.33
LAPTM4B-203ENST00000521545 STK32BQ9NY57 414 aa35.83■■■■□ 3.33
LAPTM4B-203ENST00000521545 RGPD2P0DJD1 1756 aa35.83■■■■□ 3.33
LAPTM4B-203ENST00000521545 USHBP1Q8N6Y0 703 aa35.81■■■■□ 3.32
LAPTM4B-203ENST00000521545 RAPGEF4Q8WZA2 1011 aa35.81■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms