RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 NBPF8Q3BBV2 869 aa10.67□□□□□ -0.7
PVT1-206ENST00000517838 NBPF14Q5TI25 921 aa10.67□□□□□ -0.7
PVT1-206ENST00000517838 SPON1Q9HCB6 807 aa10.67□□□□□ -0.7
PVT1-206ENST00000517838 COL14A1Q05707 1796 aaKnown RBP10.67□□□□□ -0.7
PVT1-206ENST00000517838 KCNQ2O43526 872 aa10.66□□□□□ -0.7
PVT1-206ENST00000517838 LARP1Q6PKG0 1096 aaKnown RBP10.66□□□□□ -0.7
PVT1-206ENST00000517838 KIF12Q96FN5 646 aa10.66□□□□□ -0.7
PVT1-206ENST00000517838 DLC1Q96QB1 1528 aa10.66□□□□□ -0.7
PVT1-206ENST00000517838 RGPD8O14715 1765 aaPredicted RBP10.66□□□□□ -0.7
PVT1-206ENST00000517838 RGPD1P0DJD0 1748 aa10.66□□□□□ -0.7
PVT1-206ENST00000517838 TRPM3Q9HCF6 1732 aaPredicted RBP10.65□□□□□ -0.7
PVT1-206ENST00000517838 IFT172Q9UG01 1749 aa10.65□□□□□ -0.7
PVT1-206ENST00000517838 EVA1CP58658 441 aa10.65□□□□□ -0.7
PVT1-206ENST00000517838 GSE1Q14687 1217 aa10.65□□□□□ -0.7
PVT1-206ENST00000517838 DCAF8Q5TAQ9 597 aa10.65□□□□□ -0.7
PVT1-206ENST00000517838 NUTM2GQ5VZR2 741 aa10.65□□□□□ -0.7
PVT1-206ENST00000517838 PPP1R1BQ9UD71 204 aaPredicted RBP10.65□□□□□ -0.7
PVT1-206ENST00000517838 TNS1Q9HBL0 1735 aaKnown RBP10.64□□□□□ -0.71
PVT1-206ENST00000517838 ALS2Q96Q42 1657 aa10.64□□□□□ -0.71
PVT1-206ENST00000517838 GALR2O43603 387 aaPredicted RBP10.64□□□□□ -0.71
PVT1-206ENST00000517838 TCP11L2Q8N4U5 519 aa10.64□□□□□ -0.71
PVT1-206ENST00000517838 NUDT16Q96DE0 195 aaKnown RBP10.64□□□□□ -0.71
PVT1-206ENST00000517838 ADGRB1O14514 1584 aa10.64□□□□□ -0.71
PVT1-206ENST00000517838 EIF3AQ14152 1382 aaKnown RBP10.64□□□□□ -0.71
PVT1-206ENST00000517838 UTRNP46939 3433 aa10.64□□□□□ -0.71
PVT1-206ENST00000517838 TULP4Q9NRJ4 1543 aa10.63□□□□□ -0.71
PVT1-206ENST00000517838 SSH2Q76I76 1423 aa10.63□□□□□ -0.71
PVT1-206ENST00000517838 ADGRB2O60241 1585 aa10.63□□□□□ -0.71
PVT1-206ENST00000517838 PDGFDQ9GZP0 370 aaPredicted RBP10.62□□□□□ -0.71
PVT1-206ENST00000517838 NINLQ9Y2I6 1382 aa10.62□□□□□ -0.71
PVT1-206ENST00000517838 PLSCR1O15162 318 aa10.61□□□□□ -0.71
PVT1-206ENST00000517838 MS4A3Q96HJ5 214 aa10.61□□□□□ -0.71
PVT1-206ENST00000517838 ANO8Q9HCE9 1232 aaPredicted RBP10.61□□□□□ -0.71
PVT1-206ENST00000517838 KDM2AQ9Y2K7 1162 aa10.61□□□□□ -0.71
PVT1-206ENST00000517838 THRAP3Q9Y2W1 955 aaKnown RBP10.61□□□□□ -0.71
PVT1-206ENST00000517838 CAMTA1Q9Y6Y1 1673 aa10.6□□□□□ -0.71
PVT1-206ENST00000517838 MAP3K13O43283 966 aa10.6□□□□□ -0.71
PVT1-206ENST00000517838 PTF1AQ7RTS3 328 aa10.6□□□□□ -0.71
PVT1-206ENST00000517838 DCAF11Q8TEB1 546 aa10.6□□□□□ -0.71
PVT1-206ENST00000517838 CDK19Q9BWU1 502 aa10.6□□□□□ -0.71
PVT1-206ENST00000517838 RAB3GAP2Q9H2M9 1393 aa10.6□□□□□ -0.71
PVT1-206ENST00000517838 ACEP12821 1306 aa10.59□□□□□ -0.71
PVT1-206ENST00000517838 CLSPNQ9HAW4 1339 aa10.59□□□□□ -0.71
PVT1-206ENST00000517838 PLEKHG3A1L390 1219 aa10.59□□□□□ -0.71
PVT1-206ENST00000517838 GCP02774 474 aa10.59□□□□□ -0.71
PVT1-206ENST00000517838 ABTB2Q8N961 1025 aa10.59□□□□□ -0.71
PVT1-206ENST00000517838 ZNF784Q8NCA9 323 aaPredicted RBP10.59□□□□□ -0.71
PVT1-206ENST00000517838 POLR3AO14802 1390 aaPredicted RBP10.59□□□□□ -0.71
PVT1-206ENST00000517838 CPDO75976 1380 aa10.59□□□□□ -0.71
PVT1-206ENST00000517838 ATP7BP35670 1465 aa10.59□□□□□ -0.71
PVT1-206ENST00000517838 CRYBG1Q9Y4K1 1723 aa10.58□□□□□ -0.72
PVT1-206ENST00000517838 ZBTB7AO95365 584 aa10.58□□□□□ -0.72
PVT1-206ENST00000517838 PTGER2P43116 358 aa10.58□□□□□ -0.72
PVT1-206ENST00000517838 SGIP1Q9BQI5 828 aa10.58□□□□□ -0.72
PVT1-206ENST00000517838 USP19O94966 1318 aa10.58□□□□□ -0.72
PVT1-206ENST00000517838 C11orf95C9JLR9 678 aaPredicted RBP10.57□□□□□ -0.72
PVT1-206ENST00000517838 PYGBP11216 843 aa10.57□□□□□ -0.72
PVT1-206ENST00000517838 BCL11BQ9C0K0 894 aaPredicted RBP10.57□□□□□ -0.72
PVT1-206ENST00000517838 CIZ1Q9ULV3 898 aaPredicted RBP10.57□□□□□ -0.72
PVT1-206ENST00000517838 RREB1Q92766 1687 aa10.57□□□□□ -0.72
PVT1-206ENST00000517838 NUP188Q5SRE5 1749 aa10.56□□□□□ -0.72
PVT1-206ENST00000517838 CHRM1P11229 460 aaPredicted RBP10.55□□□□□ -0.72
PVT1-206ENST00000517838 NLRP13Q86W25 1043 aa10.55□□□□□ -0.72
PVT1-206ENST00000517838 STAC3Q96MF2 364 aa10.55□□□□□ -0.72
PVT1-206ENST00000517838 SYT17Q9BSW7 474 aa10.55□□□□□ -0.72
PVT1-206ENST00000517838 COL5A2P05997 1499 aaPredicted RBP10.55□□□□□ -0.72
PVT1-206ENST00000517838 OVOS2A0A0G2JMS6 1433 aa10.54□□□□□ -0.72
PVT1-206ENST00000517838 OVOS2A0A0J9YW53 1432 aa10.54□□□□□ -0.72
PVT1-206ENST00000517838 ZNF316A6NFI3 1004 aaPredicted RBP10.54□□□□□ -0.72
PVT1-206ENST00000517838 POTEIP0CG38 1075 aa10.54□□□□□ -0.72
PVT1-206ENST00000517838 CRB1P82279 1406 aa10.54□□□□□ -0.72
PVT1-206ENST00000517838 DDB1Q16531 1140 aa10.54□□□□□ -0.72
PVT1-206ENST00000517838 OVOS2Q6IE36 1432 aa10.54□□□□□ -0.72
PVT1-206ENST00000517838 MARCH10Q8NA82 808 aaPredicted RBP10.54□□□□□ -0.72
PVT1-206ENST00000517838 FHDC1Q9C0D6 1143 aaPredicted RBP10.53□□□□□ -0.72
PVT1-206ENST00000517838 AXIN2Q9Y2T1 843 aa10.53□□□□□ -0.72
PVT1-206ENST00000517838 PCDHB13Q9Y5F0 798 aa10.53□□□□□ -0.72
PVT1-206ENST00000517838 PHRF1Q9P1Y6 1649 aaKnown RBP10.53□□□□□ -0.72
PVT1-206ENST00000517838 NRKQ7Z2Y5 1582 aa10.52□□□□□ -0.72
PVT1-206ENST00000517838 ZBTB7CA1YPR0 619 aa10.52□□□□□ -0.73
PVT1-206ENST00000517838 C1QTNF8P60827 252 aa10.52□□□□□ -0.73
PVT1-206ENST00000517838 TXNRD1Q16881 649 aa10.52□□□□□ -0.73
PVT1-206ENST00000517838 TOM1L2Q6ZVM7 507 aa10.52□□□□□ -0.73
PVT1-206ENST00000517838 LMO7Q8WWI1 1683 aa10.52□□□□□ -0.73
PVT1-206ENST00000517838 AATKQ6ZMQ8 1374 aa10.52□□□□□ -0.73
PVT1-206ENST00000517838 SENP3-EIF4A1A0A087X0R7 540 aa10.51□□□□□ -0.73
PVT1-206ENST00000517838 NLRP6P59044 892 aa10.51□□□□□ -0.73
PVT1-206ENST00000517838 SLC15A2Q16348 729 aa10.51□□□□□ -0.73
PVT1-206ENST00000517838 DIEXFQ68CQ4 756 aaKnown RBP10.51□□□□□ -0.73
PVT1-206ENST00000517838 IFNL1Q8IU54 200 aa10.51□□□□□ -0.73
PVT1-206ENST00000517838 STK32BQ9NY57 414 aa10.51□□□□□ -0.73
PVT1-206ENST00000517838 TRPC6Q9Y210 931 aa10.51□□□□□ -0.73
PVT1-206ENST00000517838 BCL9O00512 1426 aa10.5□□□□□ -0.73
PVT1-206ENST00000517838 MTFR1LQ9H019 292 aa10.5□□□□□ -0.73
PVT1-206ENST00000517838 CABP2Q9NPB3 220 aa10.5□□□□□ -0.73
PVT1-206ENST00000517838 PEAK1Q9H792 1746 aa10.5□□□□□ -0.73
PVT1-206ENST00000517838 SRPK2P78362 688 aaKnown RBP10.49□□□□□ -0.73
PVT1-206ENST00000517838 NBPF1Q3BBV0 1214 aa10.49□□□□□ -0.73
PVT1-206ENST00000517838 DCBLD2Q96PD2 775 aa10.49□□□□□ -0.73
PVT1-206ENST00000517838 CABP1Q9NZU7 370 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms