RNA–Protein interactions for RNA: ENST00000517534.5

CTNNA1-203, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-203ENST00000517534 CPSF1Q10570 1443 aaKnown RBP11.97□□□□□ -0.49
CTNNA1-203ENST00000517534 ROCK2O75116 1388 aaKnown RBP11.97□□□□□ -0.49
CTNNA1-203ENST00000517534 PLSCR1O15162 318 aa11.97□□□□□ -0.49
CTNNA1-203ENST00000517534 HOXD11P31277 338 aaPredicted RBP11.97□□□□□ -0.49
CTNNA1-203ENST00000517534 DDB1Q16531 1140 aa11.97□□□□□ -0.49
CTNNA1-203ENST00000517534 MARCH10Q8NA82 808 aaPredicted RBP11.97□□□□□ -0.49
CTNNA1-203ENST00000517534 KCNH5Q8NCM2 988 aa11.97□□□□□ -0.49
CTNNA1-203ENST00000517534 CARD10Q9BWT7 1032 aa11.97□□□□□ -0.49
CTNNA1-203ENST00000517534 TTC21AQ8NDW8 1320 aa11.96□□□□□ -0.49
CTNNA1-203ENST00000517534 BCL11BQ9C0K0 894 aaPredicted RBP11.96□□□□□ -0.49
CTNNA1-203ENST00000517534 OVOS2A0A0G2JMS6 1433 aa11.95□□□□□ -0.5
CTNNA1-203ENST00000517534 OVOS2A0A0J9YW53 1432 aa11.95□□□□□ -0.5
CTNNA1-203ENST00000517534 OVOS2Q6IE36 1432 aa11.95□□□□□ -0.5
CTNNA1-203ENST00000517534 QRICH2Q9H0J4 1663 aa11.95□□□□□ -0.5
CTNNA1-203ENST00000517534 PROM2Q8N271 834 aa11.95□□□□□ -0.5
CTNNA1-203ENST00000517534 CDCA7Q9BWT1 371 aaPredicted RBP11.95□□□□□ -0.5
CTNNA1-203ENST00000517534 COL18A1P39060 1754 aa11.95□□□□□ -0.5
CTNNA1-203ENST00000517534 BCL9O00512 1426 aa11.94□□□□□ -0.5
CTNNA1-203ENST00000517534 PIK3C2AO00443 1686 aa11.94□□□□□ -0.5
CTNNA1-203ENST00000517534 SOX12O15370 315 aa11.94□□□□□ -0.5
CTNNA1-203ENST00000517534 PARP4Q9UKK3 1724 aaKnown RBP11.94□□□□□ -0.5
CTNNA1-203ENST00000517534 TRPM1Q7Z4N2 1603 aa11.93□□□□□ -0.5
CTNNA1-203ENST00000517534 KTN1Q86UP2 1357 aaKnown RBP11.93□□□□□ -0.5
CTNNA1-203ENST00000517534 ANO8Q9HCE9 1232 aaPredicted RBP11.93□□□□□ -0.5
CTNNA1-203ENST00000517534 PEAK1Q9H792 1746 aa11.93□□□□□ -0.5
CTNNA1-203ENST00000517534 USP31Q70CQ4 1352 aa11.92□□□□□ -0.5
CTNNA1-203ENST00000517534 SBNO2Q9Y2G9 1366 aa11.92□□□□□ -0.5
CTNNA1-203ENST00000517534 RREB1Q92766 1687 aa11.92□□□□□ -0.5
CTNNA1-203ENST00000517534 KCNQ2O43526 872 aa11.92□□□□□ -0.5
CTNNA1-203ENST00000517534 CSB-PGBD3P0DP91 1061 aa11.92□□□□□ -0.5
CTNNA1-203ENST00000517534 SPON1Q9HCB6 807 aa11.92□□□□□ -0.5
CTNNA1-203ENST00000517534 FOXD4L1Q9NU39 408 aa11.92□□□□□ -0.5
CTNNA1-203ENST00000517534 EXOC5O00471 708 aa11.91□□□□□ -0.5
CTNNA1-203ENST00000517534 NME9Q86XW9 330 aa11.91□□□□□ -0.5
CTNNA1-203ENST00000517534 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.91□□□□□ -0.51e-6■■□□□ 13.1
CTNNA1-203ENST00000517534 NUP188Q5SRE5 1749 aa11.91□□□□□ -0.5
CTNNA1-203ENST00000517534 NFAT5O94916 1531 aa11.91□□□□□ -0.5
CTNNA1-203ENST00000517534 CD163L1Q9NR16 1453 aa11.9□□□□□ -0.5
CTNNA1-203ENST00000517534 CARD11Q9BXL7 1154 aa11.9□□□□□ -0.5
CTNNA1-203ENST00000517534 PDGFDQ9GZP0 370 aaPredicted RBP11.9□□□□□ -0.5
CTNNA1-203ENST00000517534 SLC12A5Q9H2X9 1139 aa11.9□□□□□ -0.5
CTNNA1-203ENST00000517534 CCDC7Q96M83 1385 aa11.9□□□□□ -0.5
CTNNA1-203ENST00000517534 LRRC37A3O60309 1634 aa11.89□□□□□ -0.51
CTNNA1-203ENST00000517534 UTRNP46939 3433 aa11.88□□□□□ -0.51
CTNNA1-203ENST00000517534 TMC1Q8TDI8 760 aa11.88□□□□□ -0.51
CTNNA1-203ENST00000517534 ERBB3P21860 1342 aa11.87□□□□□ -0.51
CTNNA1-203ENST00000517534 TXNRD1Q16881 649 aa11.87□□□□□ -0.51
CTNNA1-203ENST00000517534 PUS7Q96PZ0 661 aaKnown RBP11.87□□□□□ -0.51
CTNNA1-203ENST00000517534 PTGER2P43116 358 aa11.86□□□□□ -0.51
CTNNA1-203ENST00000517534 HDGFL2Q7Z4V5 671 aaPredicted RBP11.86□□□□□ -0.51
CTNNA1-203ENST00000517534 ANKRD24Q8TF21 1146 aa11.86□□□□□ -0.51
CTNNA1-203ENST00000517534 NLRP2Q9NX02 1062 aa11.86□□□□□ -0.51
CTNNA1-203ENST00000517534 PPP1R1BQ9UD71 204 aaPredicted RBP11.86□□□□□ -0.51
CTNNA1-203ENST00000517534 ABCC6O95255 1503 aa11.86□□□□□ -0.51
CTNNA1-203ENST00000517534 TNS2Q63HR2 1409 aa11.86□□□□□ -0.51
CTNNA1-203ENST00000517534 AKAP12Q02952 1782 aa11.85□□□□□ -0.51
CTNNA1-203ENST00000517534 NINLQ9Y2I6 1382 aa11.85□□□□□ -0.51
CTNNA1-203ENST00000517534 ZBTB7AO95365 584 aa11.85□□□□□ -0.51
CTNNA1-203ENST00000517534 SLC15A2Q16348 729 aa11.85□□□□□ -0.51
CTNNA1-203ENST00000517534 TESK2Q96S53 571 aa11.85□□□□□ -0.51
CTNNA1-203ENST00000517534 A0A1W2PP64 1363 aa11.84□□□□□ -0.51
CTNNA1-203ENST00000517534 IL2RBP14784 551 aa11.84□□□□□ -0.51
CTNNA1-203ENST00000517534 ACSBG1Q96GR2 724 aa11.84□□□□□ -0.51
CTNNA1-203ENST00000517534 STK32BQ9NY57 414 aa11.84□□□□□ -0.51
CTNNA1-203ENST00000517534 EDC4Q6P2E9 1401 aaKnown RBP11.84□□□□□ -0.51
CTNNA1-203ENST00000517534 SBF2Q86WG5 1849 aa11.83□□□□□ -0.51
CTNNA1-203ENST00000517534 RGPD3A6NKT7 1758 aaPredicted RBP11.83□□□□□ -0.52
CTNNA1-203ENST00000517534 RGPD4Q7Z3J3 1758 aa11.83□□□□□ -0.52
CTNNA1-203ENST00000517534 YY1P25490 414 aa11.83□□□□□ -0.52
CTNNA1-203ENST00000517534 IP6K1Q92551 441 aa11.83□□□□□ -0.52
CTNNA1-203ENST00000517534 TERF2IPQ9NYB0 399 aa11.83□□□□□ -0.52
CTNNA1-203ENST00000517534 ATF5Q9Y2D1 282 aaPredicted RBP11.83□□□□□ -0.52
CTNNA1-203ENST00000517534 ST20-MTHFSA0A0A6YYL1 179 aa11.82□□□□□ -0.52
CTNNA1-203ENST00000517534 MON2Q7Z3U7 1717 aa11.82□□□□□ -0.52
CTNNA1-203ENST00000517534 RGPD5Q99666 1765 aa11.82□□□□□ -0.52
CTNNA1-203ENST00000517534 TONSLQ96HA7 1378 aa11.81□□□□□ -0.52
CTNNA1-203ENST00000517534 FBLN1P23142 703 aa11.81□□□□□ -0.52
CTNNA1-203ENST00000517534 SGIP1Q9BQI5 828 aa11.81□□□□□ -0.52
CTNNA1-203ENST00000517534 CASZ1Q86V15 1759 aa11.8□□□□□ -0.52
CTNNA1-203ENST00000517534 LRRC4BQ9NT99 713 aa11.8□□□□□ -0.52
CTNNA1-203ENST00000517534 WNK3Q9BYP7 1800 aa11.8□□□□□ -0.52
CTNNA1-203ENST00000517534 USP54Q70EL1 1684 aa11.8□□□□□ -0.52
CTNNA1-203ENST00000517534 LTV1Q96GA3 475 aaPredicted RBP11.79□□□□□ -0.52
CTNNA1-203ENST00000517534 SYT17Q9BSW7 474 aa11.79□□□□□ -0.52
CTNNA1-203ENST00000517534 MTFR1LQ9H019 292 aa11.79□□□□□ -0.52
CTNNA1-203ENST00000517534 MAP3K19Q56UN5 1328 aa11.79□□□□□ -0.52
CTNNA1-203ENST00000517534 HOXC9P31274 260 aa11.78□□□□□ -0.52
CTNNA1-203ENST00000517534 ZNF827Q17R98 1081 aa11.78□□□□□ -0.52
CTNNA1-203ENST00000517534 DDX54Q8TDD1 881 aaKnown RBP11.78□□□□□ -0.52
CTNNA1-203ENST00000517534 COG3Q96JB2 828 aa11.78□□□□□ -0.52
CTNNA1-203ENST00000517534 DCAF8L1A6NGE4 600 aa11.77□□□□□ -0.53
CTNNA1-203ENST00000517534 SLC24A1O60721 1099 aa11.77□□□□□ -0.53
CTNNA1-203ENST00000517534 AKT1S1Q96B36 256 aa11.77□□□□□ -0.53
CTNNA1-203ENST00000517534 FHDC1Q9C0D6 1143 aaPredicted RBP11.77□□□□□ -0.53
CTNNA1-203ENST00000517534 FYB1O15117 783 aa11.76□□□□□ -0.53
CTNNA1-203ENST00000517534 NHSQ6T4R5 1651 aa11.75□□□□□ -0.53
CTNNA1-203ENST00000517534 SLC4A2P04920 1241 aa11.75□□□□□ -0.53
CTNNA1-203ENST00000517534 PRIM1P49642 420 aaKnown RBP11.75□□□□□ -0.53
CTNNA1-203ENST00000517534 SLC27A3Q5K4L6 730 aa11.75□□□□□ -0.53
CTNNA1-203ENST00000517534 AMPHP49418 695 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms