RNA–Protein interactions for RNA: ENST00000517251.1

SCARNA20.6-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 106 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.6-201ENST00000517251 TMPOP42166 694 aaKnown RBP4.24□□□□□ -1.73
SCARNA20.6-201ENST00000517251 SAFB2Q14151 953 aaKnown RBP eCLIP4.24□□□□□ -1.73
SCARNA20.6-201ENST00000517251 CYB5RLQ6IPT4 315 aa4.24□□□□□ -1.73
SCARNA20.6-201ENST00000517251 PANK1Q8TE04 598 aa4.24□□□□□ -1.73
SCARNA20.6-201ENST00000517251 CLUAP1Q96AJ1 413 aa4.24□□□□□ -1.73
SCARNA20.6-201ENST00000517251 GGNBP2Q9H3C7 697 aa4.24□□□□□ -1.73
SCARNA20.6-201ENST00000517251 ARHGEF10O15013 1369 aa4.24□□□□□ -1.73
SCARNA20.6-201ENST00000517251 MRC1P22897 1456 aa4.24□□□□□ -1.73
SCARNA20.6-201ENST00000517251 PXDNQ92626 1479 aa4.24□□□□□ -1.73
SCARNA20.6-201ENST00000517251 ABCC4O15439 1325 aa4.23□□□□□ -1.73
SCARNA20.6-201ENST00000517251 MST1RQ04912 1400 aa4.23□□□□□ -1.73
SCARNA20.6-201ENST00000517251 ADGRL3Q9HAR2 1447 aa4.23□□□□□ -1.73
SCARNA20.6-201ENST00000517251 CT47B1P0C2W7 299 aaPredicted RBP4.23□□□□□ -1.73
SCARNA20.6-201ENST00000517251 ANP32AP39687 249 aaKnown RBP4.23□□□□□ -1.73
SCARNA20.6-201ENST00000517251 BRPF1P55201 1214 aaPredicted RBP4.23□□□□□ -1.73
SCARNA20.6-201ENST00000517251 WAPLQ7Z5K2 1190 aa4.23□□□□□ -1.73
SCARNA20.6-201ENST00000517251 TSR2Q969E8 191 aaKnown RBP4.23□□□□□ -1.73
SCARNA20.6-201ENST00000517251 SIRT1Q96EB6 747 aa4.23□□□□□ -1.73
SCARNA20.6-201ENST00000517251 CDK19Q9BWU1 502 aa4.23□□□□□ -1.73
SCARNA20.6-201ENST00000517251 POLKQ9UBT6 870 aa4.23□□□□□ -1.73
SCARNA20.6-201ENST00000517251 PCDHB15Q9Y5E8 787 aa4.23□□□□□ -1.73
SCARNA20.6-201ENST00000517251 COL22A1Q8NFW1 1626 aaPredicted RBP4.23□□□□□ -1.73
SCARNA20.6-201ENST00000517251 MSH6P52701 1360 aa4.23□□□□□ -1.73
SCARNA20.6-201ENST00000517251 MYH3P11055 1940 aa4.23□□□□□ -1.73
SCARNA20.6-201ENST00000517251 NCKAP5LQ9HCH0 1330 aa4.22□□□□□ -1.73
SCARNA20.6-201ENST00000517251 WASLO00401 505 aaPredicted RBP4.22□□□□□ -1.73
SCARNA20.6-201ENST00000517251 ZNF853P0CG23 659 aa4.22□□□□□ -1.73
SCARNA20.6-201ENST00000517251 TRIM27P14373 513 aa4.22□□□□□ -1.73
SCARNA20.6-201ENST00000517251 IL13P35225 146 aa4.22□□□□□ -1.73
SCARNA20.6-201ENST00000517251 TNNT2P45379 298 aaPredicted RBP4.22□□□□□ -1.73
SCARNA20.6-201ENST00000517251 SRPK2P78362 688 aaKnown RBP4.22□□□□□ -1.73
SCARNA20.6-201ENST00000517251 MVPQ14764 893 aaKnown RBP4.22□□□□□ -1.73
SCARNA20.6-201ENST00000517251 FAM161AQ3B820 660 aa4.22□□□□□ -1.73
SCARNA20.6-201ENST00000517251 NME9Q86XW9 330 aa4.22□□□□□ -1.73
SCARNA20.6-201ENST00000517251 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.22□□□□□ -1.73
SCARNA20.6-201ENST00000517251 CFAP53Q96M91 514 aa4.22□□□□□ -1.73
SCARNA20.6-201ENST00000517251 BCL2L13Q9BXK5 485 aa4.22□□□□□ -1.73
SCARNA20.6-201ENST00000517251 TERF2IPQ9NYB0 399 aa4.22□□□□□ -1.73
SCARNA20.6-201ENST00000517251 STK26Q9P289 416 aa4.22□□□□□ -1.73
SCARNA20.6-201ENST00000517251 ZRANB1Q9UGI0 708 aa4.22□□□□□ -1.73
SCARNA20.6-201ENST00000517251 COG6Q9Y2V7 657 aa4.22□□□□□ -1.73
SCARNA20.6-201ENST00000517251 EMILIN1Q9Y6C2 1016 aa4.22□□□□□ -1.73
SCARNA20.6-201ENST00000517251 ITGB4P16144 1822 aa4.22□□□□□ -1.73
SCARNA20.6-201ENST00000517251 RTL1A6NKG5 1358 aa4.22□□□□□ -1.73
SCARNA20.6-201ENST00000517251 MAPK8IP3Q9UPT6 1336 aa4.21□□□□□ -1.73
SCARNA20.6-201ENST00000517251 CICQ96RK0 1608 aaPredicted RBP4.21□□□□□ -1.73
SCARNA20.6-201ENST00000517251 ARAP2Q8WZ64 1704 aa4.21□□□□□ -1.73
SCARNA20.6-201ENST00000517251 CHD4Q14839 1912 aa4.21□□□□□ -1.74
SCARNA20.6-201ENST00000517251 LTKP29376 864 aa4.21□□□□□ -1.74
SCARNA20.6-201ENST00000517251 AAMPQ13685 434 aa4.21□□□□□ -1.74
SCARNA20.6-201ENST00000517251 SSH1Q8WYL5 1049 aa4.21□□□□□ -1.74
SCARNA20.6-201ENST00000517251 MYH16Q9H6N6 1097 aa4.21□□□□□ -1.74
SCARNA20.6-201ENST00000517251 CABP1Q9NZU7 370 aa4.21□□□□□ -1.74
SCARNA20.6-201ENST00000517251 SBNO1A3KN83 1393 aa4.21□□□□□ -1.74
SCARNA20.6-201ENST00000517251 LAMB2P55268 1798 aa4.21□□□□□ -1.74
SCARNA20.6-201ENST00000517251 IGSF1Q8N6C5 1336 aa4.21□□□□□ -1.74
SCARNA20.6-201ENST00000517251 KIF16BQ96L93 1317 aa4.21□□□□□ -1.74
SCARNA20.6-201ENST00000517251 FLT4P35916 1363 aa4.2□□□□□ -1.74
SCARNA20.6-201ENST00000517251 KIF24Q5T7B8 1368 aa4.2□□□□□ -1.74
SCARNA20.6-201ENST00000517251 KIAA0232Q92628 1395 aa4.2□□□□□ -1.74
SCARNA20.6-201ENST00000517251 SEC24BO95487 1268 aa4.2□□□□□ -1.74
SCARNA20.6-201ENST00000517251 U2AF1L5P0DN76 240 aaPredicted RBP4.2□□□□□ -1.74
SCARNA20.6-201ENST00000517251 FBLN1P23142 703 aa4.2□□□□□ -1.74
SCARNA20.6-201ENST00000517251 PRKAR2BP31323 418 aa4.2□□□□□ -1.74
SCARNA20.6-201ENST00000517251 U2AF1Q01081 240 aaKnown RBP eCLIP4.2□□□□□ -1.74
SCARNA20.6-201ENST00000517251 EXOSC9Q06265 439 aaKnown RBP4.2□□□□□ -1.74
SCARNA20.6-201ENST00000517251 NFE2L2Q16236 605 aa4.2□□□□□ -1.74
SCARNA20.6-201ENST00000517251 HDGFL2Q7Z4V5 671 aaPredicted RBP4.2□□□□□ -1.74
SCARNA20.6-201ENST00000517251 SMC5Q8IY18 1101 aa4.2□□□□□ -1.74
SCARNA20.6-201ENST00000517251 SPEF2Q9C093 1822 aa4.2□□□□□ -1.74
SCARNA20.6-201ENST00000517251 OVOS2A0A0G2JMS6 1433 aa4.2□□□□□ -1.74
SCARNA20.6-201ENST00000517251 MYO5AQ9Y4I1 1855 aaKnown RBP4.2□□□□□ -1.74
SCARNA20.6-201ENST00000517251 TTC21BQ7Z4L5 1316 aa4.2□□□□□ -1.74
SCARNA20.6-201ENST00000517251 RREB1Q92766 1687 aa4.19□□□□□ -1.74
SCARNA20.6-201ENST00000517251 ROBO1Q9Y6N7 1651 aa4.19□□□□□ -1.74
SCARNA20.6-201ENST00000517251 NRAPQ86VF7 1730 aa4.19□□□□□ -1.74
SCARNA20.6-201ENST00000517251 PLEKHG3A1L390 1219 aa4.19□□□□□ -1.74
SCARNA20.6-201ENST00000517251 DIAPH1O60610 1272 aaKnown RBP4.19□□□□□ -1.74
SCARNA20.6-201ENST00000517251 HDAC1Q13547 482 aaPredicted RBP4.19□□□□□ -1.74
SCARNA20.6-201ENST00000517251 ALDH1L2Q3SY69 923 aa4.19□□□□□ -1.74
SCARNA20.6-201ENST00000517251 ATF7IPQ6VMQ6 1270 aa4.19□□□□□ -1.74
SCARNA20.6-201ENST00000517251 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.19□□□□□ -1.74
SCARNA20.6-201ENST00000517251 NUDT16Q96DE0 195 aaKnown RBP4.19□□□□□ -1.74
SCARNA20.6-201ENST00000517251 PHACTR3Q96KR7 559 aa4.19□□□□□ -1.74
SCARNA20.6-201ENST00000517251 TBC1D32Q96NH3 1257 aa4.19□□□□□ -1.74
SCARNA20.6-201ENST00000517251 ANTXR1Q9H6X2 564 aa4.19□□□□□ -1.74
SCARNA20.6-201ENST00000517251 POGKQ9P215 609 aa4.19□□□□□ -1.74
SCARNA20.6-201ENST00000517251 PDZRN3Q9UPQ7 1066 aa4.19□□□□□ -1.74
SCARNA20.6-201ENST00000517251 MAP3K19Q56UN5 1328 aa4.19□□□□□ -1.74
SCARNA20.6-201ENST00000517251 TTC21AQ8NDW8 1320 aa4.19□□□□□ -1.74
SCARNA20.6-201ENST00000517251 COL16A1Q07092 1604 aaPredicted RBP4.18□□□□□ -1.74
SCARNA20.6-201ENST00000517251 FCHSD2O94868 740 aa4.18□□□□□ -1.74
SCARNA20.6-201ENST00000517251 RGS3P49796 1198 aa4.18□□□□□ -1.74
SCARNA20.6-201ENST00000517251 EIF4A2Q14240 407 aaKnown RBP4.18□□□□□ -1.74
SCARNA20.6-201ENST00000517251 NEUROD2Q15784 382 aa4.18□□□□□ -1.74
SCARNA20.6-201ENST00000517251 ZKSCAN2Q63HK3 967 aa4.18□□□□□ -1.74
SCARNA20.6-201ENST00000517251 NPM2Q86SE8 214 aaKnown RBP4.18□□□□□ -1.74
SCARNA20.6-201ENST00000517251 TXNDC2Q86VQ3 553 aa4.18□□□□□ -1.74
SCARNA20.6-201ENST00000517251 AEBP1Q8IUX7 1158 aa4.18□□□□□ -1.74
SCARNA20.6-201ENST00000517251 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms