RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 IRX6P78412 446 aaPredicted RBP5.48□□□□□ -1.53
RNU4-60P-201ENST00000517239 GNL2Q13823 731 aaKnown RBP5.48□□□□□ -1.53
RNU4-60P-201ENST00000517239 TCEAL1Q15170 157 aa5.48□□□□□ -1.53
RNU4-60P-201ENST00000517239 TAS1R3Q7RTX0 852 aa5.48□□□□□ -1.53
RNU4-60P-201ENST00000517239 OGFOD1Q8N543 542 aa5.48□□□□□ -1.53
RNU4-60P-201ENST00000517239 GTF3C2Q8WUA4 911 aaPredicted RBP5.48□□□□□ -1.53
RNU4-60P-201ENST00000517239 RNF34Q969K3 372 aa5.48□□□□□ -1.53
RNU4-60P-201ENST00000517239 ZNF594Q96JF6 807 aaPredicted RBP5.48□□□□□ -1.53
RNU4-60P-201ENST00000517239 ACBD3Q9H3P7 528 aa5.48□□□□□ -1.53
RNU4-60P-201ENST00000517239 BMP2KQ9NSY1 1161 aaPredicted RBP5.48□□□□□ -1.53
RNU4-60P-201ENST00000517239 PARNO95453 639 aaKnown RBP5.47□□□□□ -1.53
RNU4-60P-201ENST00000517239 DNAJB2P25686 324 aa5.47□□□□□ -1.53
RNU4-60P-201ENST00000517239 TNNI2P48788 182 aa5.47□□□□□ -1.53
RNU4-60P-201ENST00000517239 FKBP4Q02790 459 aaKnown RBP eCLIP5.47□□□□□ -1.53
RNU4-60P-201ENST00000517239 KCNH2Q12809 1159 aa5.47□□□□□ -1.53
RNU4-60P-201ENST00000517239 ECM1Q16610 540 aa5.47□□□□□ -1.53
RNU4-60P-201ENST00000517239 SLFNL1Q499Z3 407 aa5.47□□□□□ -1.53
RNU4-60P-201ENST00000517239 RGL4Q8IZJ4 473 aa5.47□□□□□ -1.53
RNU4-60P-201ENST00000517239 NLGN1Q8N2Q7 840 aa5.47□□□□□ -1.53
RNU4-60P-201ENST00000517239 FAM161BQ96MY7 647 aa5.47□□□□□ -1.53
RNU4-60P-201ENST00000517239 OCEL1Q9H607 264 aa5.47□□□□□ -1.53
RNU4-60P-201ENST00000517239 MRS2Q9HD23 443 aa5.47□□□□□ -1.53
RNU4-60P-201ENST00000517239 CXXC1Q9P0U4 656 aaPredicted RBP5.47□□□□□ -1.53
RNU4-60P-201ENST00000517239 FAM198AQ9UFP1 575 aa5.47□□□□□ -1.53
RNU4-60P-201ENST00000517239 ZBBXA8MT70 800 aa5.46□□□□□ -1.54
RNU4-60P-201ENST00000517239 PER1O15534 1290 aaPredicted RBP5.46□□□□□ -1.54
RNU4-60P-201ENST00000517239 PEX14O75381 377 aa5.46□□□□□ -1.54
RNU4-60P-201ENST00000517239 FMNL1O95466 1100 aaPredicted RBP5.46□□□□□ -1.54
RNU4-60P-201ENST00000517239 GCGRP47871 477 aa5.46□□□□□ -1.54
RNU4-60P-201ENST00000517239 ARHGAP4P98171 946 aa5.46□□□□□ -1.54
RNU4-60P-201ENST00000517239 RBL2Q08999 1139 aa5.46□□□□□ -1.54
RNU4-60P-201ENST00000517239 MTMR3Q13615 1198 aa5.46□□□□□ -1.54
RNU4-60P-201ENST00000517239 NUDT18Q6ZVK8 323 aa5.46□□□□□ -1.54
RNU4-60P-201ENST00000517239 ARMC5Q96C12 935 aa5.46□□□□□ -1.54
RNU4-60P-201ENST00000517239 JPH4Q96JJ6 628 aa5.46□□□□□ -1.54
RNU4-60P-201ENST00000517239 SEPT3Q9UH03 358 aa5.46□□□□□ -1.54
RNU4-60P-201ENST00000517239 NOP58Q9Y2X3 529 aaKnown RBP5.46□□□□□ -1.54
RNU4-60P-201ENST00000517239 DNMT3AQ9Y6K1 912 aaPredicted RBP5.46□□□□□ -1.54
RNU4-60P-201ENST00000517239 RNF187Q5TA31 235 aaPredicted RBP5.45□□□□□ -1.54
RNU4-60P-201ENST00000517239 SOGA3Q5TF21 947 aa5.45□□□□□ -1.54
RNU4-60P-201ENST00000517239 PPP1R18Q6NYC8 613 aa5.45□□□□□ -1.54
RNU4-60P-201ENST00000517239 ZCRB1Q8TBF4 217 aaKnown RBP5.45□□□□□ -1.54
RNU4-60P-201ENST00000517239 TMEM134Q9H6X4 195 aa5.45□□□□□ -1.54
RNU4-60P-201ENST00000517239 DNAAF2Q9NVR5 837 aaKnown RBP5.45□□□□□ -1.54
RNU4-60P-201ENST00000517239 PARP2Q9UGN5 583 aa5.45□□□□□ -1.54
RNU4-60P-201ENST00000517239 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.45□□□□□ -1.54
RNU4-60P-201ENST00000517239 SLC34A2O95436 690 aa5.44□□□□□ -1.54
RNU4-60P-201ENST00000517239 FXR2P51116 673 aaKnown RBP eCLIP5.44□□□□□ -1.54
RNU4-60P-201ENST00000517239 CLDN10P78369 228 aa5.44□□□□□ -1.54
RNU4-60P-201ENST00000517239 FANCCQ00597 558 aa5.44□□□□□ -1.54
RNU4-60P-201ENST00000517239 ARID5AQ03989 594 aa5.44□□□□□ -1.54
RNU4-60P-201ENST00000517239 PSME1Q06323 249 aa5.44□□□□□ -1.54
RNU4-60P-201ENST00000517239 SF3B2Q13435 895 aaKnown RBP5.44□□□□□ -1.54
RNU4-60P-201ENST00000517239 BMS1Q14692 1282 aaKnown RBP5.44□□□□□ -1.54
RNU4-60P-201ENST00000517239 ZNF746Q6NUN9 644 aaPredicted RBP5.44□□□□□ -1.54
RNU4-60P-201ENST00000517239 RNF135Q8IUD6 432 aa5.44□□□□□ -1.54
RNU4-60P-201ENST00000517239 PLPP7Q8NBV4 271 aa5.44□□□□□ -1.54
RNU4-60P-201ENST00000517239 MORC4Q8TE76 937 aa5.44□□□□□ -1.54
RNU4-60P-201ENST00000517239 SYMPKQ92797 1274 aaKnown RBP5.44□□□□□ -1.54
RNU4-60P-201ENST00000517239 ZDHHC16Q969W1 377 aa5.44□□□□□ -1.54
RNU4-60P-201ENST00000517239 GMLQ99445 158 aa5.44□□□□□ -1.54
RNU4-60P-201ENST00000517239 CEP126Q9P2H0 1117 aa5.44□□□□□ -1.54
RNU4-60P-201ENST00000517239 VTI1BQ9UEU0 232 aa5.44□□□□□ -1.54
RNU4-60P-201ENST00000517239 C3orf80F5H4A9 247 aa5.43□□□□□ -1.54
RNU4-60P-201ENST00000517239 SORBS3O60504 671 aa5.43□□□□□ -1.54
RNU4-60P-201ENST00000517239 LGR5O75473 907 aa5.43□□□□□ -1.54
RNU4-60P-201ENST00000517239 LDHBP07195 334 aaKnown RBP5.43□□□□□ -1.54
RNU4-60P-201ENST00000517239 ZNF76P36508 570 aa5.43□□□□□ -1.54
RNU4-60P-201ENST00000517239 IRX5P78411 483 aaPredicted RBP5.43□□□□□ -1.54
RNU4-60P-201ENST00000517239 OCLNQ16625 522 aa5.43□□□□□ -1.54
RNU4-60P-201ENST00000517239 EML3Q32P44 896 aa5.43□□□□□ -1.54
RNU4-60P-201ENST00000517239 HSP90AB2PQ58FF8 381 aa5.43□□□□□ -1.54
RNU4-60P-201ENST00000517239 TMC7Q7Z402 723 aa5.43□□□□□ -1.54
RNU4-60P-201ENST00000517239 JAZF1Q86VZ6 243 aa5.43□□□□□ -1.54
RNU4-60P-201ENST00000517239 TRIM50Q86XT4 487 aa5.43□□□□□ -1.54
RNU4-60P-201ENST00000517239 ZNF454Q8N9F8 522 aa5.43□□□□□ -1.54
RNU4-60P-201ENST00000517239 TMC1Q8TDI8 760 aa5.43□□□□□ -1.54
RNU4-60P-201ENST00000517239 DUSP9Q99956 384 aaKnown RBP5.43□□□□□ -1.54
RNU4-60P-201ENST00000517239 MKNK1Q9BUB5 465 aa5.43□□□□□ -1.54
RNU4-60P-201ENST00000517239 OSBPL2Q9H1P3 480 aa5.43□□□□□ -1.54
RNU4-60P-201ENST00000517239 METTL5Q9NRN9 209 aaKnown RBP5.43□□□□□ -1.54
RNU4-60P-201ENST00000517239 RNF19AQ9NV58 838 aa5.43□□□□□ -1.54
RNU4-60P-201ENST00000517239 CHPF2Q9P2E5 772 aa5.43□□□□□ -1.54
RNU4-60P-201ENST00000517239 DMGDHQ9UI17 866 aaKnown RBP5.43□□□□□ -1.54
RNU4-60P-201ENST00000517239 INPP5FQ9Y2H2 1132 aa5.43□□□□□ -1.54
RNU4-60P-201ENST00000517239 RBM19Q9Y4C8 960 aaKnown RBP5.43□□□□□ -1.54
RNU4-60P-201ENST00000517239 HSD3B2P26439 372 aa5.42□□□□□ -1.54
RNU4-60P-201ENST00000517239 MAPK8P45983 427 aa5.42□□□□□ -1.54
RNU4-60P-201ENST00000517239 ATP1A2P50993 1020 aa5.42□□□□□ -1.54
RNU4-60P-201ENST00000517239 SEC13P55735 322 aa5.42□□□□□ -1.54
RNU4-60P-201ENST00000517239 PLCB3Q01970 1234 aa5.42□□□□□ -1.54
RNU4-60P-201ENST00000517239 PSMD2Q13200 908 aa5.42□□□□□ -1.54
RNU4-60P-201ENST00000517239 FILIP1Q7Z7B0 1213 aa5.42□□□□□ -1.54
RNU4-60P-201ENST00000517239 HINFPQ9BQA5 517 aa5.42□□□□□ -1.54
RNU4-60P-201ENST00000517239 ADAM33Q9BZ11 813 aa5.42□□□□□ -1.54
RNU4-60P-201ENST00000517239 PNMA3Q9UL41 463 aa5.42□□□□□ -1.54
RNU4-60P-201ENST00000517239 ZBTB7BO15156 539 aaPredicted RBP5.41□□□□□ -1.54
RNU4-60P-201ENST00000517239 STK10O94804 968 aaKnown RBP5.41□□□□□ -1.54
RNU4-60P-201ENST00000517239 ITGAEP38570 1179 aa5.41□□□□□ -1.54
RNU4-60P-201ENST00000517239 PDE3BQ13370 1112 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms