RNA–Protein interactions for RNA: ENST00000517181.1

RNU1-54P-201, Transcript of RNA, U1 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU1-54P, Length 120 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-54P-201ENST00000517181 SNRKQ9NRH2 765 aa6.34□□□□□ -1.39
RNU1-54P-201ENST00000517181 ZIC2O95409 532 aaPredicted RBP6.33□□□□□ -1.4
RNU1-54P-201ENST00000517181 LCE2AQ5TA79 106 aaPredicted RBP6.33□□□□□ -1.4
RNU1-54P-201ENST00000517181 ZBTB33Q86T24 672 aa6.33□□□□□ -1.4
RNU1-54P-201ENST00000517181 CCDC116Q8IYX3 515 aa6.33□□□□□ -1.4
RNU1-54P-201ENST00000517181 KIFC2Q96AC6 838 aa6.33□□□□□ -1.4
RNU1-54P-201ENST00000517181 SLC10A4Q96EP9 437 aa6.33□□□□□ -1.4
RNU1-54P-201ENST00000517181 KCTD15Q96SI1 283 aaPredicted RBP6.33□□□□□ -1.4
RNU1-54P-201ENST00000517181 ZBBXA8MT70 800 aa6.32□□□□□ -1.4
RNU1-54P-201ENST00000517181 ESPNB1AK53 854 aa6.32□□□□□ -1.4
RNU1-54P-201ENST00000517181 MEIOBQ8N635 442 aa6.32□□□□□ -1.4
RNU1-54P-201ENST00000517181 FBXO45P0C2W1 286 aa6.31□□□□□ -1.4
RNU1-54P-201ENST00000517181 INTS6LQ5JSJ4 861 aaKnown RBP6.31□□□□□ -1.4
RNU1-54P-201ENST00000517181 MRPL14Q6P1L8 145 aaKnown RBP6.31□□□□□ -1.4
RNU1-54P-201ENST00000517181 EMILIN1Q9Y6C2 1016 aa6.31□□□□□ -1.4
RNU1-54P-201ENST00000517181 NDUFB9Q9Y6M9 179 aa6.31□□□□□ -1.4
RNU1-54P-201ENST00000517181 NBPF20Q3BBV1 942 aa6.3□□□□□ -1.4
RNU1-54P-201ENST00000517181 PPP1R26Q5T8A7 1209 aaPredicted RBP6.3□□□□□ -1.4
RNU1-54P-201ENST00000517181 Q6ZVU0 165 aa6.3□□□□□ -1.4
RNU1-54P-201ENST00000517181 ZFP42Q96MM3 310 aa6.3□□□□□ -1.4
RNU1-54P-201ENST00000517181 APBB1O00213 710 aa6.29□□□□□ -1.4
RNU1-54P-201ENST00000517181 DHX9Q08211 1270 aaKnown RBP6.28□□□□□ -1.4
RNU1-54P-201ENST00000517181 NR1H3Q13133 447 aa6.28□□□□□ -1.4
RNU1-54P-201ENST00000517181 NFX1Q12986 1120 aaKnown RBP6.27□□□□□ -1.41
RNU1-54P-201ENST00000517181 TREML4Q6UXN2 200 aa6.27□□□□□ -1.41
RNU1-54P-201ENST00000517181 DZIP3Q86Y13 1208 aaKnown RBP6.27□□□□□ -1.41
RNU1-54P-201ENST00000517181 SEPT12Q8IYM1 358 aa6.27□□□□□ -1.41
RNU1-54P-201ENST00000517181 LINC00528Q8N1L1 170 aa6.27□□□□□ -1.41
RNU1-54P-201ENST00000517181 PURBQ96QR8 312 aaKnown RBP6.27□□□□□ -1.41
RNU1-54P-201ENST00000517181 PGPEP1Q9NXJ5 209 aa6.27□□□□□ -1.41
RNU1-54P-201ENST00000517181 LILRA1O75019 489 aa6.26□□□□□ -1.41
RNU1-54P-201ENST00000517181 IRF5Q13568 498 aa6.26□□□□□ -1.41
RNU1-54P-201ENST00000517181 SCARF1Q14162 830 aa6.26□□□□□ -1.41
RNU1-54P-201ENST00000517181 MCM6Q14566 821 aa6.26□□□□□ -1.41
RNU1-54P-201ENST00000517181 LCE2CQ5TA81 110 aa6.26□□□□□ -1.41
RNU1-54P-201ENST00000517181 TBC1D2BQ9UPU7 963 aa6.26□□□□□ -1.41
RNU1-54P-201ENST00000517181 ERVH48-1M5A8F1 160 aa6.25□□□□□ -1.41
RNU1-54P-201ENST00000517181 MCCD1P59942 119 aaPredicted RBP6.25□□□□□ -1.41
RNU1-54P-201ENST00000517181 CBLBQ13191 982 aa6.25□□□□□ -1.41
RNU1-54P-201ENST00000517181 TSEN34Q9BSV6 310 aaKnown RBP6.25□□□□□ -1.41
RNU1-54P-201ENST00000517181 SOS2Q07890 1332 aaPredicted RBP6.25□□□□□ -1.41
RNU1-54P-201ENST00000517181 TERTO14746 1132 aaKnown RBP6.24□□□□□ -1.41
RNU1-54P-201ENST00000517181 CCDC125Q86Z20 511 aa6.24□□□□□ -1.41
RNU1-54P-201ENST00000517181 KDF1Q8NAX2 398 aaPredicted RBP6.24□□□□□ -1.41
RNU1-54P-201ENST00000517181 ZNF784Q8NCA9 323 aaPredicted RBP6.24□□□□□ -1.41
RNU1-54P-201ENST00000517181 TMPRSS4Q9NRS4 437 aa6.24□□□□□ -1.41
RNU1-54P-201ENST00000517181 PCDHB9Q9Y5E1 797 aa6.24□□□□□ -1.41
RNU1-54P-201ENST00000517181 SPINT1O43278 529 aa6.23□□□□□ -1.41
RNU1-54P-201ENST00000517181 GIGYF1O75420 1035 aaPredicted RBP6.23□□□□□ -1.41
RNU1-54P-201ENST00000517181 NPAS3Q8IXF0 933 aa6.23□□□□□ -1.41
RNU1-54P-201ENST00000517181 UPP2O95045 317 aa6.22□□□□□ -1.41
RNU1-54P-201ENST00000517181 ADD1P35611 737 aaKnown RBP6.22□□□□□ -1.41
RNU1-54P-201ENST00000517181 C6orf118Q5T5N4 469 aa6.22□□□□□ -1.41
RNU1-54P-201ENST00000517181 ZNF592Q92610 1267 aa6.22□□□□□ -1.41
RNU1-54P-201ENST00000517181 NXF1Q9UBU9 619 aaKnown RBP6.22□□□□□ -1.41
RNU1-54P-201ENST00000517181 WFS1O76024 890 aa6.21□□□□□ -1.42
RNU1-54P-201ENST00000517181 ADH1AP07327 375 aa6.21□□□□□ -1.42
RNU1-54P-201ENST00000517181 BMP2P12643 396 aa6.21□□□□□ -1.42
RNU1-54P-201ENST00000517181 DNMT3LQ9UJW3 386 aa6.21□□□□□ -1.42
RNU1-54P-201ENST00000517181 SOBPA7XYQ1 873 aa6.2□□□□□ -1.42
RNU1-54P-201ENST00000517181 H3BM21 787 aa6.2□□□□□ -1.42
RNU1-54P-201ENST00000517181 ERVK-9P63128 1117 aa6.2□□□□□ -1.42
RNU1-54P-201ENST00000517181 TMEM132AQ24JP5 1023 aa6.2□□□□□ -1.42
RNU1-54P-201ENST00000517181 AGBL1Q96MI9 1066 aa6.2□□□□□ -1.42
RNU1-54P-201ENST00000517181 GDPD2Q9HCC8 539 aa6.2□□□□□ -1.42
RNU1-54P-201ENST00000517181 PRM3Q9NNZ6 103 aa6.2□□□□□ -1.42
RNU1-54P-201ENST00000517181 ZNF330Q9Y3S2 320 aaPredicted RBP6.2□□□□□ -1.42
RNU1-54P-201ENST00000517181 WIPF1O43516 503 aa6.19□□□□□ -1.42
RNU1-54P-201ENST00000517181 RAB15P59190 212 aa6.19□□□□□ -1.42
RNU1-54P-201ENST00000517181 RNF20Q5VTR2 975 aa6.19□□□□□ -1.42
RNU1-54P-201ENST00000517181 PHTF2Q8N3S3 785 aa6.19□□□□□ -1.42
RNU1-54P-201ENST00000517181 CEP126Q9P2H0 1117 aa6.19□□□□□ -1.42
RNU1-54P-201ENST00000517181 CHIC2Q9UKJ5 165 aa6.19□□□□□ -1.42
RNU1-54P-201ENST00000517181 COG6Q9Y2V7 657 aa6.19□□□□□ -1.42
RNU1-54P-201ENST00000517181 TTLL8A6PVC2 850 aa6.18□□□□□ -1.42
RNU1-54P-201ENST00000517181 MAN1A2O60476 641 aa6.18□□□□□ -1.42
RNU1-54P-201ENST00000517181 VSIG8P0DPA2 414 aa6.18□□□□□ -1.42
RNU1-54P-201ENST00000517181 PTGIRP43119 386 aa6.18□□□□□ -1.42
RNU1-54P-201ENST00000517181 CYLDQ9NQC7 956 aa6.18□□□□□ -1.42
RNU1-54P-201ENST00000517181 TRAK2O60296 914 aa6.17□□□□□ -1.42
RNU1-54P-201ENST00000517181 CTSOP43234 321 aaPredicted RBP6.17□□□□□ -1.42
RNU1-54P-201ENST00000517181 SCTRP47872 440 aa6.17□□□□□ -1.42
RNU1-54P-201ENST00000517181 RELBQ01201 579 aa6.17□□□□□ -1.42
RNU1-54P-201ENST00000517181 INSM2Q96T92 566 aaPredicted RBP6.17□□□□□ -1.42
RNU1-54P-201ENST00000517181 EIF4G2P78344 907 aaKnown RBP eCLIP6.16□□□□□ -1.42
RNU1-54P-201ENST00000517181 WASHC4Q2M389 1173 aa6.16□□□□□ -1.42
RNU1-54P-201ENST00000517181 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.16□□□□□ -1.42
RNU1-54P-201ENST00000517181 FOXD4L5Q5VV16 416 aaPredicted RBP6.16□□□□□ -1.42
RNU1-54P-201ENST00000517181 CC2D2BQ6DHV5 1058 aa6.16□□□□□ -1.42
RNU1-54P-201ENST00000517181 RNF217Q8TC41 542 aa6.16□□□□□ -1.42
RNU1-54P-201ENST00000517181 TRIM52Q96A61 297 aa6.16□□□□□ -1.42
RNU1-54P-201ENST00000517181 CCDC85AQ96PX6 553 aaPredicted RBP6.16□□□□□ -1.42
RNU1-54P-201ENST00000517181 ERBB4Q15303 1308 aa6.16□□□□□ -1.42
RNU1-54P-201ENST00000517181 ABL2P42684 1182 aa6.15□□□□□ -1.42
RNU1-54P-201ENST00000517181 VAC14Q08AM6 782 aa6.15□□□□□ -1.42
RNU1-54P-201ENST00000517181 FLIIQ13045 1269 aa6.15□□□□□ -1.42
RNU1-54P-201ENST00000517181 OSBPL3Q9H4L5 887 aa6.15□□□□□ -1.42
RNU1-54P-201ENST00000517181 ZNF395Q9H8N7 513 aaPredicted RBP6.15□□□□□ -1.42
RNU1-54P-201ENST00000517181 ATP5J2-PTCD1G3V325 749 aa6.14□□□□□ -1.43
RNU1-54P-201ENST00000517181 PPFIA3O75145 1194 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms