RNA–Protein interactions for RNA: ENST00000515585.1

ABCC3-216, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 3

Gene ABCC3, Length 484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-216ENST00000515585 PLEKHF1Q96S99 279 aa18.34■□□□□ 0.53
ABCC3-216ENST00000515585 NUDCQ9Y266 331 aa18.34■□□□□ 0.53
ABCC3-216ENST00000515585 AHDC1Q5TGY3 1603 aaPredicted RBP18.34■□□□□ 0.53
ABCC3-216ENST00000515585 ABCC6O95255 1503 aa18.33■□□□□ 0.53
ABCC3-216ENST00000515585 RUNDC1Q96C34 613 aa18.33■□□□□ 0.52
ABCC3-216ENST00000515585 CAMTA1Q9Y6Y1 1673 aa18.33■□□□□ 0.52
ABCC3-216ENST00000515585 SPATA31A3Q5VYP0 1347 aa18.32■□□□□ 0.52
ABCC3-216ENST00000515585 PAK3O75914 559 aaPredicted RBP18.32■□□□□ 0.52
ABCC3-216ENST00000515585 DLG5Q8TDM6 1919 aa18.31■□□□□ 0.52
ABCC3-216ENST00000515585 PDE3BQ13370 1112 aa18.31■□□□□ 0.52
ABCC3-216ENST00000515585 RGPD5Q99666 1765 aa18.3■□□□□ 0.52
ABCC3-216ENST00000515585 PHLPP1O60346 1717 aa18.3■□□□□ 0.52
ABCC3-216ENST00000515585 U2AF1L5P0DN76 240 aaPredicted RBP18.3■□□□□ 0.52
ABCC3-216ENST00000515585 U2AF1Q01081 240 aaKnown RBP eCLIP18.3■□□□□ 0.521e-7■□□□□ 10.2
ABCC3-216ENST00000515585 XPCQ01831 940 aaPredicted RBP18.3■□□□□ 0.52
ABCC3-216ENST00000515585 EIF4A2Q14240 407 aaKnown RBP18.3■□□□□ 0.52
ABCC3-216ENST00000515585 CCDC146Q8IYE0 955 aa18.3■□□□□ 0.52
ABCC3-216ENST00000515585 KCNH5Q8NCM2 988 aa18.3■□□□□ 0.52
ABCC3-216ENST00000515585 RSPH6AQ9H0K4 717 aa18.3■□□□□ 0.52
ABCC3-216ENST00000515585 NUTM2BA6NNL0 878 aaPredicted RBP18.29■□□□□ 0.52
ABCC3-216ENST00000515585 NUTM2EB1AL46 878 aaPredicted RBP18.29■□□□□ 0.52
ABCC3-216ENST00000515585 APAF1O14727 1248 aa18.29■□□□□ 0.52
ABCC3-216ENST00000515585 FCHSD2O94868 740 aa18.29■□□□□ 0.52
ABCC3-216ENST00000515585 NUTM2GQ5VZR2 741 aa18.29■□□□□ 0.52
ABCC3-216ENST00000515585 NUTM2AQ8IVF1 878 aaPredicted RBP18.29■□□□□ 0.52
ABCC3-216ENST00000515585 ARHGEF10O15013 1369 aa18.29■□□□□ 0.52
ABCC3-216ENST00000515585 LMO7Q8WWI1 1683 aa18.28■□□□□ 0.52
ABCC3-216ENST00000515585 RGPD2P0DJD1 1756 aa18.28■□□□□ 0.52
ABCC3-216ENST00000515585 HOXC9P31274 260 aa18.28■□□□□ 0.52
ABCC3-216ENST00000515585 HSP90AB2PQ58FF8 381 aa18.28■□□□□ 0.52
ABCC3-216ENST00000515585 DDX17Q92841 729 aaKnown RBP18.28■□□□□ 0.52
ABCC3-216ENST00000515585 NCAPD2Q15021 1401 aa18.28■□□□□ 0.52
ABCC3-216ENST00000515585 KDRP35968 1356 aa18.28■□□□□ 0.52
ABCC3-216ENST00000515585 COL22A1Q8NFW1 1626 aaPredicted RBP18.27■□□□□ 0.52
ABCC3-216ENST00000515585 PPM1GO15355 546 aaPredicted RBP18.27■□□□□ 0.52
ABCC3-216ENST00000515585 CCDC27Q2M243 656 aa18.27■□□□□ 0.52
ABCC3-216ENST00000515585 AFF2P51816 1311 aa18.26■□□□□ 0.51
ABCC3-216ENST00000515585 GCP02774 474 aa18.26■□□□□ 0.51
ABCC3-216ENST00000515585 ARHGEF25Q86VW2 580 aa18.26■□□□□ 0.51
ABCC3-216ENST00000515585 TCP11L2Q8N4U5 519 aa18.26■□□□□ 0.51
ABCC3-216ENST00000515585 COL16A1Q07092 1604 aaPredicted RBP18.26■□□□□ 0.51
ABCC3-216ENST00000515585 FAM208AQ9UK61 1670 aaKnown RBP18.25■□□□□ 0.51
ABCC3-216ENST00000515585 U2SURPO15042 1029 aaKnown RBP18.25■□□□□ 0.51
ABCC3-216ENST00000515585 IP6K1Q92551 441 aa18.25■□□□□ 0.51
ABCC3-216ENST00000515585 IGSF1Q8N6C5 1336 aa18.24■□□□□ 0.51
ABCC3-216ENST00000515585 RBM6P78332 1123 aaKnown RBP18.24■□□□□ 0.51
ABCC3-216ENST00000515585 TRMT2AQ8IZ69 625 aaKnown RBP18.24■□□□□ 0.51
ABCC3-216ENST00000515585 QTRT2Q9H974 415 aaKnown RBP18.24■□□□□ 0.51
ABCC3-216ENST00000515585 CPDO75976 1380 aa18.23■□□□□ 0.51
ABCC3-216ENST00000515585 SENP3-EIF4A1A0A087X0R7 540 aa18.23■□□□□ 0.51
ABCC3-216ENST00000515585 PNNQ9H307 717 aaKnown RBP18.23■□□□□ 0.51
ABCC3-216ENST00000515585 AMPHP49418 695 aa18.22■□□□□ 0.51
ABCC3-216ENST00000515585 SOX12O15370 315 aa18.21■□□□□ 0.51
ABCC3-216ENST00000515585 PRKAR2BP31323 418 aa18.2■□□□□ 0.5
ABCC3-216ENST00000515585 TMPOP42166 694 aaKnown RBP18.2■□□□□ 0.5
ABCC3-216ENST00000515585 WWC1Q8IX03 1113 aa18.2■□□□□ 0.5
ABCC3-216ENST00000515585 CDCA7LQ96GN5 454 aa18.2■□□□□ 0.5
ABCC3-216ENST00000515585 RGS12O14924 1447 aa18.19■□□□□ 0.5
ABCC3-216ENST00000515585 SLFN5Q08AF3 891 aa18.19■□□□□ 0.5
ABCC3-216ENST00000515585 GOLGA2Q08379 1002 aa18.18■□□□□ 0.5
ABCC3-216ENST00000515585 EYA1Q99502 592 aa18.18■□□□□ 0.5
ABCC3-216ENST00000515585 TRIM35Q9UPQ4 493 aa18.18■□□□□ 0.5
ABCC3-216ENST00000515585 SALL2Q9Y467 1007 aaPredicted RBP18.18■□□□□ 0.5
ABCC3-216ENST00000515585 RNF123Q5XPI4 1314 aa18.18■□□□□ 0.5
ABCC3-216ENST00000515585 HMOX1P09601 288 aa18.17■□□□□ 0.5
ABCC3-216ENST00000515585 DUSP27Q5VZP5 1158 aa18.17■□□□□ 0.5
ABCC3-216ENST00000515585 AEBP1Q8IUX7 1158 aa18.17■□□□□ 0.5
ABCC3-216ENST00000515585 WDR63Q8IWG1 891 aa18.17■□□□□ 0.5
ABCC3-216ENST00000515585 PHACTR3Q96KR7 559 aa18.17■□□□□ 0.5
ABCC3-216ENST00000515585 MAPK8IP3Q9UPT6 1336 aa18.17■□□□□ 0.5
ABCC3-216ENST00000515585 C8orf37Q96NL8 207 aa18.16■□□□□ 0.5
ABCC3-216ENST00000515585 LRRC37A3O60309 1634 aa18.16■□□□□ 0.5
ABCC3-216ENST00000515585 NFE2L2Q16236 605 aa18.15■□□□□ 0.5
ABCC3-216ENST00000515585 SPINK5Q9NQ38 1064 aaPredicted RBP18.15■□□□□ 0.5
ABCC3-216ENST00000515585 SULT6B1Q6IMI4 303 aa18.14■□□□□ 0.49
ABCC3-216ENST00000515585 LMOD2Q6P5Q4 547 aa18.14■□□□□ 0.49
ABCC3-216ENST00000515585 NGLY1Q96IV0 654 aa18.14■□□□□ 0.49
ABCC3-216ENST00000515585 RRP7AQ9Y3A4 280 aaKnown RBP18.14■□□□□ 0.49
ABCC3-216ENST00000515585 E9PSI1 815 aa18.13■□□□□ 0.49
ABCC3-216ENST00000515585 AXIN2Q9Y2T1 843 aa18.13■□□□□ 0.49
ABCC3-216ENST00000515585 VIRMAQ69YN4 1812 aaKnown RBP18.13■□□□□ 0.49
ABCC3-216ENST00000515585 IL16Q14005 1332 aa18.13■□□□□ 0.49
ABCC3-216ENST00000515585 LRRC59Q96AG4 307 aaKnown RBP18.12■□□□□ 0.49
ABCC3-216ENST00000515585 PLEKHG2Q9H7P9 1386 aa18.12■□□□□ 0.49
ABCC3-216ENST00000515585 CABLES1Q8TDN4 633 aa18.11■□□□□ 0.49
ABCC3-216ENST00000515585 GTF3C3Q9Y5Q9 886 aa18.11■□□□□ 0.49
ABCC3-216ENST00000515585 ERBB3P21860 1342 aa18.11■□□□□ 0.49
ABCC3-216ENST00000515585 KIAA0232Q92628 1395 aa18.11■□□□□ 0.49
ABCC3-216ENST00000515585 COL14A1Q05707 1796 aaKnown RBP18.1■□□□□ 0.49
ABCC3-216ENST00000515585 ADAMTS7Q9UKP4 1686 aa18.1■□□□□ 0.49
ABCC3-216ENST00000515585 RIPK4P57078 832 aa18.1■□□□□ 0.49
ABCC3-216ENST00000515585 PKD1L3Q7Z443 1732 aa18.09■□□□□ 0.49
ABCC3-216ENST00000515585 NBPF6Q5VWK0 638 aa18.09■□□□□ 0.49
ABCC3-216ENST00000515585 NBPF4Q96M43 638 aa18.09■□□□□ 0.49
ABCC3-216ENST00000515585 ZC3H6P61129 1189 aaKnown RBP18.08■□□□□ 0.48
ABCC3-216ENST00000515585 NEUROD2Q15784 382 aa18.08■□□□□ 0.48
ABCC3-216ENST00000515585 NEFMP07197 916 aa18.07■□□□□ 0.48
ABCC3-216ENST00000515585 ANKRD24Q8TF21 1146 aa18.07■□□□□ 0.48
ABCC3-216ENST00000515585 SUPT16HQ9Y5B9 1047 aaKnown RBP18.07■□□□□ 0.48
ABCC3-216ENST00000515585 ADAMTS2O95450 1211 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms