RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 KIF24Q5T7B8 1368 aa12.49□□□□□ -0.41
DHFR-206ENST00000513048 IL13P35225 146 aa12.49□□□□□ -0.41
DHFR-206ENST00000513048 RGPD1P0DJD0 1748 aa12.48□□□□□ -0.41
DHFR-206ENST00000513048 ZBED9Q6R2W3 1325 aa12.48□□□□□ -0.41
DHFR-206ENST00000513048 DIAPH1O60610 1272 aaKnown RBP12.48□□□□□ -0.41
DHFR-206ENST00000513048 FLT4P35916 1363 aa12.47□□□□□ -0.41
DHFR-206ENST00000513048 PPM1GO15355 546 aaPredicted RBP12.47□□□□□ -0.41
DHFR-206ENST00000513048 KCNH5Q8NCM2 988 aa12.47□□□□□ -0.41
DHFR-206ENST00000513048 RTL1A6NKG5 1358 aa12.46□□□□□ -0.41
DHFR-206ENST00000513048 ARHGEF10O15013 1369 aa12.46□□□□□ -0.41
DHFR-206ENST00000513048 SOX12O15370 315 aa12.46□□□□□ -0.41
DHFR-206ENST00000513048 GCP02774 474 aa12.46□□□□□ -0.41
DHFR-206ENST00000513048 HSP90AB2PQ58FF8 381 aa12.46□□□□□ -0.41
DHFR-206ENST00000513048 ABCA3Q99758 1704 aa12.45□□□□□ -0.42
DHFR-206ENST00000513048 CENPBP07199 599 aaPredicted RBP12.45□□□□□ -0.42
DHFR-206ENST00000513048 HOXC9P31274 260 aa12.45□□□□□ -0.42
DHFR-206ENST00000513048 EIF4A2Q14240 407 aaKnown RBP12.45□□□□□ -0.42
DHFR-206ENST00000513048 ARHGEF25Q86VW2 580 aa12.45□□□□□ -0.42
DHFR-206ENST00000513048 NUDCQ9Y266 331 aa12.45□□□□□ -0.42
DHFR-206ENST00000513048 COL18A1P39060 1754 aa12.44□□□□□ -0.42
DHFR-206ENST00000513048 U2AF1L5P0DN76 240 aaPredicted RBP12.44□□□□□ -0.42
DHFR-206ENST00000513048 U2AF1Q01081 240 aaKnown RBP eCLIP12.44□□□□□ -0.42
DHFR-206ENST00000513048 LMOD2Q6P5Q4 547 aa12.44□□□□□ -0.42
DHFR-206ENST00000513048 CCDC146Q8IYE0 955 aa12.44□□□□□ -0.42
DHFR-206ENST00000513048 PLEKHF1Q96S99 279 aa12.44□□□□□ -0.42
DHFR-206ENST00000513048 SENP3-EIF4A1A0A087X0R7 540 aa12.43□□□□□ -0.42
DHFR-206ENST00000513048 IP6K1Q92551 441 aa12.43□□□□□ -0.42
DHFR-206ENST00000513048 RUNDC1Q96C34 613 aa12.43□□□□□ -0.42
DHFR-206ENST00000513048 COL16A1Q07092 1604 aaPredicted RBP12.43□□□□□ -0.42
DHFR-206ENST00000513048 COL22A1Q8NFW1 1626 aaPredicted RBP12.42□□□□□ -0.42
DHFR-206ENST00000513048 U2SURPO15042 1029 aaKnown RBP12.42□□□□□ -0.42
DHFR-206ENST00000513048 AMPHP49418 695 aa12.42□□□□□ -0.42
DHFR-206ENST00000513048 RSPH6AQ9H0K4 717 aa12.42□□□□□ -0.42
DHFR-206ENST00000513048 ABCC6O95255 1503 aa12.42□□□□□ -0.42
DHFR-206ENST00000513048 ZNF521Q96K83 1311 aa12.41□□□□□ -0.42
DHFR-206ENST00000513048 APAF1O14727 1248 aa12.41□□□□□ -0.42
DHFR-206ENST00000513048 TOM1O60784 492 aa12.41□□□□□ -0.42
DHFR-206ENST00000513048 FCHSD2O94868 740 aa12.41□□□□□ -0.42
DHFR-206ENST00000513048 CERKQ8TCT0 537 aa12.41□□□□□ -0.42
DHFR-206ENST00000513048 CABLES1Q8TDN4 633 aa12.41□□□□□ -0.42
DHFR-206ENST00000513048 CPDO75976 1380 aa12.41□□□□□ -0.42
DHFR-206ENST00000513048 PHLPP1O60346 1717 aa12.4□□□□□ -0.42
DHFR-206ENST00000513048 RGPD5Q99666 1765 aa12.4□□□□□ -0.42
DHFR-206ENST00000513048 IGSF1Q8N6C5 1336 aa12.39□□□□□ -0.43
DHFR-206ENST00000513048 CAMTA1Q9Y6Y1 1673 aa12.39□□□□□ -0.43
DHFR-206ENST00000513048 TCP11L2Q8N4U5 519 aa12.39□□□□□ -0.43
DHFR-206ENST00000513048 KDRP35968 1356 aa12.39□□□□□ -0.43
DHFR-206ENST00000513048 LMO7Q8WWI1 1683 aa12.38□□□□□ -0.43
DHFR-206ENST00000513048 NCAPD2Q15021 1401 aa12.38□□□□□ -0.43
DHFR-206ENST00000513048 PLEKHG5O94827 1062 aa12.38□□□□□ -0.43
DHFR-206ENST00000513048 HMOX1P09601 288 aa12.38□□□□□ -0.43
DHFR-206ENST00000513048 PRKAR2BP31323 418 aa12.38□□□□□ -0.43
DHFR-206ENST00000513048 POLA2Q14181 598 aa12.38□□□□□ -0.43
DHFR-206ENST00000513048 AEBP1Q8IUX7 1158 aa12.38□□□□□ -0.43
DHFR-206ENST00000513048 NGEFQ8N5V2 710 aa12.38□□□□□ -0.43
DHFR-206ENST00000513048 LRRC59Q96AG4 307 aaKnown RBP12.38□□□□□ -0.43
DHFR-206ENST00000513048 EYA1Q99502 592 aa12.38□□□□□ -0.43
DHFR-206ENST00000513048 AXIN2Q9Y2T1 843 aa12.38□□□□□ -0.43
DHFR-206ENST00000513048 RGPD2P0DJD1 1756 aa12.38□□□□□ -0.43
DHFR-206ENST00000513048 UBAP1LF5GYI3 381 aa12.37□□□□□ -0.43
DHFR-206ENST00000513048 ZC3H6P61129 1189 aaKnown RBP12.37□□□□□ -0.43
DHFR-206ENST00000513048 PHACTR3Q96KR7 559 aa12.37□□□□□ -0.43
DHFR-206ENST00000513048 KIAA0232Q92628 1395 aa12.37□□□□□ -0.43
DHFR-206ENST00000513048 SULT6B1Q6IMI4 303 aa12.36□□□□□ -0.43
DHFR-206ENST00000513048 PNNQ9H307 717 aaKnown RBP12.36□□□□□ -0.43
DHFR-206ENST00000513048 SALL2Q9Y467 1007 aaPredicted RBP12.36□□□□□ -0.43
DHFR-206ENST00000513048 TMPOP42166 694 aaKnown RBP12.35□□□□□ -0.43
DHFR-206ENST00000513048 PIP4K2BP78356 416 aa12.35□□□□□ -0.43
DHFR-206ENST00000513048 PDE3BQ13370 1112 aa12.35□□□□□ -0.43
DHFR-206ENST00000513048 CCDC27Q2M243 656 aa12.35□□□□□ -0.43
DHFR-206ENST00000513048 RBM42Q9BTD8 480 aaKnown RBP12.35□□□□□ -0.43
DHFR-206ENST00000513048 RRP7AQ9Y3A4 280 aaKnown RBP12.35□□□□□ -0.43
DHFR-206ENST00000513048 ZBTB7CA1YPR0 619 aa12.34□□□□□ -0.43
DHFR-206ENST00000513048 NBPF6Q5VWK0 638 aa12.34□□□□□ -0.43
DHFR-206ENST00000513048 WWC1Q8IX03 1113 aa12.34□□□□□ -0.43
DHFR-206ENST00000513048 ANKRD24Q8TF21 1146 aa12.34□□□□□ -0.43
DHFR-206ENST00000513048 LTV1Q96GA3 475 aaPredicted RBP12.34□□□□□ -0.43
DHFR-206ENST00000513048 CDCA7LQ96GN5 454 aa12.34□□□□□ -0.43
DHFR-206ENST00000513048 NBPF4Q96M43 638 aa12.34□□□□□ -0.43
DHFR-206ENST00000513048 ERBB3P21860 1342 aa12.34□□□□□ -0.43
DHFR-206ENST00000513048 DLG5Q8TDM6 1919 aa12.33□□□□□ -0.44
DHFR-206ENST00000513048 FAM208AQ9UK61 1670 aaKnown RBP12.33□□□□□ -0.44
DHFR-206ENST00000513048 CHRNA2Q15822 529 aa12.33□□□□□ -0.44
DHFR-206ENST00000513048 TRIM35Q9UPQ4 493 aa12.33□□□□□ -0.44
DHFR-206ENST00000513048 MAPK8IP3Q9UPT6 1336 aa12.33□□□□□ -0.44
DHFR-206ENST00000513048 NFE2L2Q16236 605 aa12.32□□□□□ -0.44
DHFR-206ENST00000513048 TRMT2AQ8IZ69 625 aaKnown RBP12.32□□□□□ -0.44
DHFR-206ENST00000513048 COL14A1Q05707 1796 aaKnown RBP12.3□□□□□ -0.44
DHFR-206ENST00000513048 COL5A2P05997 1499 aaPredicted RBP12.3□□□□□ -0.44
DHFR-206ENST00000513048 FAM83GA6ND36 823 aa12.3□□□□□ -0.44
DHFR-206ENST00000513048 RIPK4P57078 832 aa12.3□□□□□ -0.44
DHFR-206ENST00000513048 GOLGA2Q08379 1002 aa12.3□□□□□ -0.44
DHFR-206ENST00000513048 SLFN5Q08AF3 891 aa12.3□□□□□ -0.44
DHFR-206ENST00000513048 NEUROD2Q15784 382 aa12.3□□□□□ -0.44
DHFR-206ENST00000513048 WDR63Q8IWG1 891 aa12.3□□□□□ -0.44
DHFR-206ENST00000513048 USHBP1Q8N6Y0 703 aa12.3□□□□□ -0.44
DHFR-206ENST00000513048 PRDM11Q9NQV5 511 aa12.3□□□□□ -0.44
DHFR-206ENST00000513048 DUSP27Q5VZP5 1158 aa12.29□□□□□ -0.44
DHFR-206ENST00000513048 MTHFSDQ2M296 383 aaKnown RBP12.28□□□□□ -0.44
DHFR-206ENST00000513048 NEFMP07197 916 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms