RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 ZNF428Q96B54 188 aa18.1■□□□□ 0.49
USP38-202ENST00000510377 GAS2L3Q86XJ1 694 aa18.1■□□□□ 0.49
USP38-202ENST00000510377 ADGRL1O94910 1474 aa18.1■□□□□ 0.49
USP38-202ENST00000510377 C8orf58Q8NAV2 365 aa18.09■□□□□ 0.49
USP38-202ENST00000510377 SNX21Q969T3 373 aa18.09■□□□□ 0.49
USP38-202ENST00000510377 UQCRHLA0A096LP55 91 aa18.09■□□□□ 0.49
USP38-202ENST00000510377 UQCRHP07919 91 aa18.09■□□□□ 0.49
USP38-202ENST00000510377 KRT24Q2M2I5 525 aa18.09■□□□□ 0.49
USP38-202ENST00000510377 PRDM15P57071 1507 aaPredicted RBP18.09■□□□□ 0.49
USP38-202ENST00000510377 ATAD2Q6PL18 1390 aa18.09■□□□□ 0.49
USP38-202ENST00000510377 FIBPO43427 364 aa18.08■□□□□ 0.49
USP38-202ENST00000510377 IL1RAPL2Q9NP60 686 aa18.08■□□□□ 0.49
USP38-202ENST00000510377 RPGRIP1LQ68CZ1 1315 aa18.08■□□□□ 0.49
USP38-202ENST00000510377 NUTM2GQ5VZR2 741 aa18.08■□□□□ 0.49
USP38-202ENST00000510377 CCDC39Q9UFE4 941 aa18.08■□□□□ 0.49
USP38-202ENST00000510377 KLHL40Q2TBA0 621 aa18.08■□□□□ 0.48
USP38-202ENST00000510377 CWC22Q9HCG8 908 aaKnown RBP18.08■□□□□ 0.48
USP38-202ENST00000510377 ZRSR1Q15695 479 aaKnown RBP18.08■□□□□ 0.48
USP38-202ENST00000510377 ASXL2Q76L83 1435 aa18.08■□□□□ 0.48
USP38-202ENST00000510377 ZGPATQ8N5A5 531 aaKnown RBP18.08■□□□□ 0.48
USP38-202ENST00000510377 LARP6Q9BRS8 491 aaKnown RBP18.08■□□□□ 0.48
USP38-202ENST00000510377 TSPY26PQ9H489 355 aa18.08■□□□□ 0.48
USP38-202ENST00000510377 SAMD9LQ8IVG5 1584 aa18.07■□□□□ 0.48
USP38-202ENST00000510377 CSPP1Q1MSJ5 1256 aa18.07■□□□□ 0.48
USP38-202ENST00000510377 OTUD7AQ8TE49 926 aaPredicted RBP18.07■□□□□ 0.48
USP38-202ENST00000510377 ZMYND15Q9H091 742 aa18.07■□□□□ 0.48
USP38-202ENST00000510377 ZRANB1Q9UGI0 708 aa18.07■□□□□ 0.48
USP38-202ENST00000510377 ANKRD36BQ8N2N9 1353 aa18.07■□□□□ 0.48
USP38-202ENST00000510377 MBD3O95983 291 aa18.07■□□□□ 0.48
USP38-202ENST00000510377 PTPRTO14522 1441 aa18.06■□□□□ 0.48
USP38-202ENST00000510377 CEBPAP49715 358 aaPredicted RBP18.06■□□□□ 0.48
USP38-202ENST00000510377 FANCAO15360 1455 aa18.06■□□□□ 0.48
USP38-202ENST00000510377 ZSCAN23Q3MJ62 389 aa18.06■□□□□ 0.48
USP38-202ENST00000510377 POLR1AO95602 1720 aaPredicted RBP18.06■□□□□ 0.48
USP38-202ENST00000510377 VAMP4O75379 141 aa18.06■□□□□ 0.48
USP38-202ENST00000510377 CD2BP2O95400 341 aaKnown RBP18.06■□□□□ 0.48
USP38-202ENST00000510377 RBM25P49756 843 aaKnown RBP18.06■□□□□ 0.48
USP38-202ENST00000510377 MRPL50Q8N5N7 158 aaKnown RBP18.06■□□□□ 0.48
USP38-202ENST00000510377 IFT57Q9NWB7 429 aa18.06■□□□□ 0.48
USP38-202ENST00000510377 CCDC9Q9Y3X0 531 aaKnown RBP18.06■□□□□ 0.48
USP38-202ENST00000510377 MAST1Q9Y2H9 1570 aa18.06■□□□□ 0.48
USP38-202ENST00000510377 TRPM1Q7Z4N2 1603 aa18.06■□□□□ 0.48
USP38-202ENST00000510377 DIAPH3Q9NSV4 1193 aa18.05■□□□□ 0.48
USP38-202ENST00000510377 SMC3Q9UQE7 1217 aa18.05■□□□□ 0.48
USP38-202ENST00000510377 SURF6O75683 361 aaKnown RBP18.05■□□□□ 0.48
USP38-202ENST00000510377 SDSP20132 328 aa18.05■□□□□ 0.48
USP38-202ENST00000510377 FBXO31Q5XUX0 539 aaPredicted RBP18.05■□□□□ 0.48
USP38-202ENST00000510377 TTC22Q5TAA0 569 aa18.04■□□□□ 0.48
USP38-202ENST00000510377 IL16Q14005 1332 aa18.04■□□□□ 0.48
USP38-202ENST00000510377 ZBTB7BO15156 539 aaPredicted RBP18.04■□□□□ 0.48
USP38-202ENST00000510377 RPAP2Q8IXW5 612 aaPredicted RBP18.04■□□□□ 0.48
USP38-202ENST00000510377 CHAMP1Q96JM3 812 aa18.04■□□□□ 0.48
USP38-202ENST00000510377 PRIM1P49642 420 aaKnown RBP18.04■□□□□ 0.48
USP38-202ENST00000510377 MEIS3Q99687 375 aa18.04■□□□□ 0.48
USP38-202ENST00000510377 A0A1W2PP64 1363 aa18.03■□□□□ 0.48
USP38-202ENST00000510377 GNAI2P04899 355 aa18.03■□□□□ 0.48
USP38-202ENST00000510377 ERVK-7P63135 1459 aa18.03■□□□□ 0.48
USP38-202ENST00000510377 FSD2A1L4K1 749 aa18.03■□□□□ 0.48
USP38-202ENST00000510377 ARHGEF5Q12774 1597 aa18.03■□□□□ 0.48
USP38-202ENST00000510377 SPC24Q8NBT2 197 aa18.02■□□□□ 0.48
USP38-202ENST00000510377 ABCC2Q92887 1545 aa18.02■□□□□ 0.48
USP38-202ENST00000510377 UBTFL1P0CB47 393 aaPredicted RBP18.02■□□□□ 0.48
USP38-202ENST00000510377 CFAP65Q6ZU64 1925 aaKnown RBP18.02■□□□□ 0.48
USP38-202ENST00000510377 DDX54Q8TDD1 881 aaKnown RBP18.02■□□□□ 0.47
USP38-202ENST00000510377 SLC52A1Q9NWF4 448 aa18.02■□□□□ 0.47
USP38-202ENST00000510377 POLKQ9UBT6 870 aa18.02■□□□□ 0.47
USP38-202ENST00000510377 CDC42BPAQ5VT25 1732 aa18.02■□□□□ 0.47
USP38-202ENST00000510377 LRRCC1Q9C099 1032 aa18.01■□□□□ 0.47
USP38-202ENST00000510377 NSD2O96028 1365 aa18.01■□□□□ 0.47
USP38-202ENST00000510377 RTEL1-TNFRSF6BF6WH68 1400 aa18.01■□□□□ 0.47
USP38-202ENST00000510377 ATP10AO60312 1499 aa18.01■□□□□ 0.47
USP38-202ENST00000510377 PLEKHM2Q8IWE5 1019 aa18.01■□□□□ 0.47
USP38-202ENST00000510377 UGGT1Q9NYU2 1555 aa18.01■□□□□ 0.47
USP38-202ENST00000510377 NUTM1Q86Y26 1132 aa18■□□□□ 0.47
USP38-202ENST00000510377 HSP90B1P14625 803 aaKnown RBP18■□□□□ 0.47
USP38-202ENST00000510377 ZNF592Q92610 1267 aa17.99■□□□□ 0.47
USP38-202ENST00000510377 SLC26A8Q96RN1 970 aa17.99■□□□□ 0.47
USP38-202ENST00000510377 ATP6V1DQ9Y5K8 247 aa17.99■□□□□ 0.47
USP38-202ENST00000510377 AEBP1Q8IUX7 1158 aa17.99■□□□□ 0.47
USP38-202ENST00000510377 PRDM10Q9NQV6 1147 aa17.99■□□□□ 0.47
USP38-202ENST00000510377 ABCA8O94911 1581 aa17.99■□□□□ 0.47
USP38-202ENST00000510377 FOSBP53539 338 aa17.99■□□□□ 0.47
USP38-202ENST00000510377 PKP1Q13835 747 aa17.99■□□□□ 0.47
USP38-202ENST00000510377 GOLGA6L6A8MZA4 724 aa17.98■□□□□ 0.47
USP38-202ENST00000510377 GNAI3P08754 354 aa17.98■□□□□ 0.47
USP38-202ENST00000510377 NUDT16Q96DE0 195 aaKnown RBP17.97■□□□□ 0.47
USP38-202ENST00000510377 ZNF830Q96NB3 372 aaPredicted RBP17.97■□□□□ 0.47
USP38-202ENST00000510377 RBSNQ9H1K0 784 aa17.97■□□□□ 0.47
USP38-202ENST00000510377 MCM2P49736 904 aa17.97■□□□□ 0.47
USP38-202ENST00000510377 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.97■□□□□ 0.471e-7■■■■■ 45.3
USP38-202ENST00000510377 USP25Q9UHP3 1055 aa17.97■□□□□ 0.47
USP38-202ENST00000510377 DTNBO60941 627 aa17.96■□□□□ 0.47
USP38-202ENST00000510377 FBXW7Q969H0 707 aa17.96■□□□□ 0.47
USP38-202ENST00000510377 TMX3Q96JJ7 454 aa17.96■□□□□ 0.47
USP38-202ENST00000510377 GPATCH3Q96I76 525 aa17.96■□□□□ 0.47
USP38-202ENST00000510377 C9orf78Q9NZ63 289 aaPredicted RBP17.96■□□□□ 0.47
USP38-202ENST00000510377 NCKAP5LQ9HCH0 1330 aa17.96■□□□□ 0.46
USP38-202ENST00000510377 SYNMO15061 1565 aa17.96■□□□□ 0.46
USP38-202ENST00000510377 ARHGAP45Q92619 1136 aa17.96■□□□□ 0.46
USP38-202ENST00000510377 MX1P20591 662 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms