RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 PARP4Q9UKK3 1724 aaKnown RBP17.84■□□□□ 0.45
KDM3B-206ENST00000509468 WDR17Q8IZU2 1322 aa17.84■□□□□ 0.45
KDM3B-206ENST00000509468 SOX12O15370 315 aa17.84■□□□□ 0.45
KDM3B-206ENST00000509468 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.84■□□□□ 0.45
KDM3B-206ENST00000509468 PARD3Q8TEW0 1356 aa17.83■□□□□ 0.45
KDM3B-206ENST00000509468 DDB1Q16531 1140 aa17.83■□□□□ 0.44
KDM3B-206ENST00000509468 SLC12A5Q9H2X9 1139 aa17.83■□□□□ 0.44
KDM3B-206ENST00000509468 RGPD5Q99666 1765 aa17.83■□□□□ 0.44
KDM3B-206ENST00000509468 MON2Q7Z3U7 1717 aa17.83■□□□□ 0.44
KDM3B-206ENST00000509468 PSDA5PKW4 1024 aaPredicted RBP17.82■□□□□ 0.44
KDM3B-206ENST00000509468 CSB-PGBD3P0DP91 1061 aa17.82■□□□□ 0.44
KDM3B-206ENST00000509468 USP31Q70CQ4 1352 aa17.81■□□□□ 0.44
KDM3B-206ENST00000509468 CARD10Q9BWT7 1032 aa17.81■□□□□ 0.44
KDM3B-206ENST00000509468 SRCAPQ6ZRS2 3230 aa17.8■□□□□ 0.44
KDM3B-206ENST00000509468 ST20-MTHFSA0A0A6YYL1 179 aa17.79■□□□□ 0.44
KDM3B-206ENST00000509468 R3HDM1Q15032 1099 aaKnown RBP17.79■□□□□ 0.44
KDM3B-206ENST00000509468 NBPF14Q5TI25 921 aa17.79■□□□□ 0.44
KDM3B-206ENST00000509468 CD163L1Q9NR16 1453 aa17.78■□□□□ 0.44
KDM3B-206ENST00000509468 NME9Q86XW9 330 aa17.78■□□□□ 0.44
KDM3B-206ENST00000509468 EXOC5O00471 708 aa17.77■□□□□ 0.44
KDM3B-206ENST00000509468 OVOS2A0A0G2JMS6 1433 aa17.77■□□□□ 0.44
KDM3B-206ENST00000509468 OVOS2A0A0J9YW53 1432 aa17.77■□□□□ 0.44
KDM3B-206ENST00000509468 OVOS2Q6IE36 1432 aa17.77■□□□□ 0.44
KDM3B-206ENST00000509468 EDC4Q6P2E9 1401 aaKnown RBP17.77■□□□□ 0.44
KDM3B-206ENST00000509468 NINLQ9Y2I6 1382 aa17.77■□□□□ 0.43
KDM3B-206ENST00000509468 NFAT5O94916 1531 aa17.77■□□□□ 0.43
KDM3B-206ENST00000509468 TESK2Q96S53 571 aa17.76■□□□□ 0.43
KDM3B-206ENST00000509468 ABCC6O95255 1503 aa17.76■□□□□ 0.43
KDM3B-206ENST00000509468 LRP5O75197 1615 aa17.76■□□□□ 0.43
KDM3B-206ENST00000509468 USP54Q70EL1 1684 aa17.75■□□□□ 0.43
KDM3B-206ENST00000509468 BCL11BQ9C0K0 894 aaPredicted RBP17.75■□□□□ 0.43
KDM3B-206ENST00000509468 CCDC7Q96M83 1385 aa17.75■□□□□ 0.43
KDM3B-206ENST00000509468 SBF2Q86WG5 1849 aa17.75■□□□□ 0.43
KDM3B-206ENST00000509468 PLSCR1O15162 318 aa17.74■□□□□ 0.43
KDM3B-206ENST00000509468 LRRC37A3O60309 1634 aa17.73■□□□□ 0.43
KDM3B-206ENST00000509468 PEAK1Q9H792 1746 aa17.73■□□□□ 0.43
KDM3B-206ENST00000509468 WNK3Q9BYP7 1800 aa17.73■□□□□ 0.43
KDM3B-206ENST00000509468 MARCH10Q8NA82 808 aaPredicted RBP17.73■□□□□ 0.43
KDM3B-206ENST00000509468 A0A1W2PP64 1363 aa17.73■□□□□ 0.43
KDM3B-206ENST00000509468 LTN1O94822 1766 aa17.73■□□□□ 0.43
KDM3B-206ENST00000509468 TMF1P82094 1093 aa17.72■□□□□ 0.43
KDM3B-206ENST00000509468 NLRP2Q9NX02 1062 aa17.72■□□□□ 0.43
KDM3B-206ENST00000509468 TIMELESSQ9UNS1 1208 aa17.72■□□□□ 0.43
KDM3B-206ENST00000509468 RREB1Q92766 1687 aa17.71■□□□□ 0.43
KDM3B-206ENST00000509468 BCL9O00512 1426 aa17.71■□□□□ 0.43
KDM3B-206ENST00000509468 CDCA8Q53HL2 280 aa17.7■□□□□ 0.42
KDM3B-206ENST00000509468 COG3Q96JB2 828 aa17.7■□□□□ 0.42
KDM3B-206ENST00000509468 ERBB3P21860 1342 aa17.7■□□□□ 0.42
KDM3B-206ENST00000509468 ANKRD24Q8TF21 1146 aa17.69■□□□□ 0.42
KDM3B-206ENST00000509468 IP6K1Q92551 441 aa17.69■□□□□ 0.42
KDM3B-206ENST00000509468 IL2RBP14784 551 aa17.68■□□□□ 0.42
KDM3B-206ENST00000509468 NUP188Q5SRE5 1749 aa17.68■□□□□ 0.42
KDM3B-206ENST00000509468 RGPD3A6NKT7 1758 aaPredicted RBP17.68■□□□□ 0.42
KDM3B-206ENST00000509468 RGPD4Q7Z3J3 1758 aa17.68■□□□□ 0.42
KDM3B-206ENST00000509468 USP47Q96K76 1375 aa17.66■□□□□ 0.42
KDM3B-206ENST00000509468 CLSPNQ9HAW4 1339 aa17.66■□□□□ 0.42
KDM3B-206ENST00000509468 ANKRD36BQ8N2N9 1353 aa17.66■□□□□ 0.42
KDM3B-206ENST00000509468 AMPHP49418 695 aa17.64■□□□□ 0.41
KDM3B-206ENST00000509468 PTF1AQ7RTS3 328 aa17.64■□□□□ 0.41
KDM3B-206ENST00000509468 PROM2Q8N271 834 aa17.63■□□□□ 0.41
KDM3B-206ENST00000509468 PCGF6Q9BYE7 350 aa17.63■□□□□ 0.41
KDM3B-206ENST00000509468 TNS2Q63HR2 1409 aa17.63■□□□□ 0.41
KDM3B-206ENST00000509468 FYB1O15117 783 aa17.62■□□□□ 0.41
KDM3B-206ENST00000509468 LTV1Q96GA3 475 aaPredicted RBP17.62■□□□□ 0.41
KDM3B-206ENST00000509468 SPON1Q9HCB6 807 aa17.62■□□□□ 0.41
KDM3B-206ENST00000509468 FAM208AQ9UK61 1670 aaKnown RBP17.61■□□□□ 0.41
KDM3B-206ENST00000509468 KAT6BQ8WYB5 2073 aa17.6■□□□□ 0.41
KDM3B-206ENST00000509468 KCNQ2O43526 872 aa17.6■□□□□ 0.41
KDM3B-206ENST00000509468 HOXC9P31274 260 aa17.6■□□□□ 0.41
KDM3B-206ENST00000509468 TXNRD1Q16881 649 aa17.6■□□□□ 0.41
KDM3B-206ENST00000509468 MAP3K19Q56UN5 1328 aa17.6■□□□□ 0.41
KDM3B-206ENST00000509468 FBLN1P23142 703 aa17.58■□□□□ 0.4
KDM3B-206ENST00000509468 DDX54Q8TDD1 881 aaKnown RBP17.58■□□□□ 0.4
KDM3B-206ENST00000509468 ACSBG1Q96GR2 724 aa17.58■□□□□ 0.4
KDM3B-206ENST00000509468 GGNBP2Q9H3C7 697 aa17.57■□□□□ 0.4
KDM3B-206ENST00000509468 STK32BQ9NY57 414 aa17.57■□□□□ 0.4
KDM3B-206ENST00000509468 PPP1R1BQ9UD71 204 aaPredicted RBP17.57■□□□□ 0.4
KDM3B-206ENST00000509468 NHSQ6T4R5 1651 aa17.57■□□□□ 0.4
KDM3B-206ENST00000509468 SLC15A2Q16348 729 aa17.55■□□□□ 0.4
KDM3B-206ENST00000509468 RTL1A6NKG5 1358 aa17.54■□□□□ 0.4
KDM3B-206ENST00000509468 RRS1Q15050 365 aaKnown RBP17.54■□□□□ 0.4
KDM3B-206ENST00000509468 ZCRB1Q8TBF4 217 aaKnown RBP17.54■□□□□ 0.4
KDM3B-206ENST00000509468 ANO8Q9HCE9 1232 aaPredicted RBP17.54■□□□□ 0.4
KDM3B-206ENST00000509468 RGPD2P0DJD1 1756 aa17.53■□□□□ 0.4
KDM3B-206ENST00000509468 KIF24Q5T7B8 1368 aa17.53■□□□□ 0.4
KDM3B-206ENST00000509468 CGNL1Q0VF96 1302 aa17.52■□□□□ 0.4
KDM3B-206ENST00000509468 KIF20BQ96Q89 1820 aa17.52■□□□□ 0.4
KDM3B-206ENST00000509468 DCAF8L1A6NGE4 600 aa17.52■□□□□ 0.4
KDM3B-206ENST00000509468 CARD14Q9BXL6 1004 aa17.52■□□□□ 0.4
KDM3B-206ENST00000509468 BTAF1O14981 1849 aa17.51■□□□□ 0.39
KDM3B-206ENST00000509468 NBPF6Q5VWK0 638 aa17.51■□□□□ 0.39
KDM3B-206ENST00000509468 SMG6Q86US8 1419 aaKnown RBP17.51■□□□□ 0.39
KDM3B-206ENST00000509468 NBPF4Q96M43 638 aa17.51■□□□□ 0.39
KDM3B-206ENST00000509468 RAPGEF4Q8WZA2 1011 aa17.5■□□□□ 0.39
KDM3B-206ENST00000509468 CASZ1Q86V15 1759 aa17.5■□□□□ 0.39
KDM3B-206ENST00000509468 INSRP06213 1382 aa17.5■□□□□ 0.39
KDM3B-206ENST00000509468 PRIM1P49642 420 aaKnown RBP17.49■□□□□ 0.39
KDM3B-206ENST00000509468 HSP90AB2PQ58FF8 381 aa17.49■□□□□ 0.39
KDM3B-206ENST00000509468 SLC27A3Q5K4L6 730 aa17.49■□□□□ 0.39
KDM3B-206ENST00000509468 SYTL4Q96C24 671 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms