RNA–Protein interactions for RNA: ENST00000509093.5

COPS4-206, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2 BASIC

Gene COPS4, Length 2,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-206ENST00000509093 PLIN1O60240 522 aa14.36□□□□□ -0.11
COPS4-206ENST00000509093 GLIPR1L2Q4G1C9 344 aa14.36□□□□□ -0.11
COPS4-206ENST00000509093 RUNDC1Q96C34 613 aa14.36□□□□□ -0.11
COPS4-206ENST00000509093 TTC21AQ8NDW8 1320 aa14.36□□□□□ -0.11
COPS4-206ENST00000509093 DMRT2Q9Y5R5 561 aa14.35□□□□□ -0.11
COPS4-206ENST00000509093 NEUROD2Q15784 382 aa14.35□□□□□ -0.11
COPS4-206ENST00000509093 TCP11L2Q8N4U5 519 aa14.35□□□□□ -0.11
COPS4-206ENST00000509093 C19orf44Q9H6X5 657 aa14.35□□□□□ -0.11
COPS4-206ENST00000509093 SPINK5Q9NQ38 1064 aaPredicted RBP14.34□□□□□ -0.11
COPS4-206ENST00000509093 PIK3C2AO00443 1686 aa14.34□□□□□ -0.11
COPS4-206ENST00000509093 USP31Q70CQ4 1352 aa14.34□□□□□ -0.11
COPS4-206ENST00000509093 XPCQ01831 940 aaPredicted RBP14.34□□□□□ -0.11
COPS4-206ENST00000509093 IL13P35225 146 aa14.33□□□□□ -0.12
COPS4-206ENST00000509093 PLEKHF1Q96S99 279 aa14.33□□□□□ -0.12
COPS4-206ENST00000509093 IQSEC2Q5JU85 1478 aa14.33□□□□□ -0.12
COPS4-206ENST00000509093 FOXO3O43524 673 aa14.32□□□□□ -0.12
COPS4-206ENST00000509093 NLRP6P59044 892 aa14.32□□□□□ -0.12
COPS4-206ENST00000509093 CDK12Q9NYV4 1490 aaPredicted RBP14.32□□□□□ -0.12
COPS4-206ENST00000509093 ZNF335Q9H4Z2 1342 aaPredicted RBP14.32□□□□□ -0.12
COPS4-206ENST00000509093 PSME1Q06323 249 aa14.31□□□□□ -0.12
COPS4-206ENST00000509093 L1TD1Q5T7N2 865 aaKnown RBP14.31□□□□□ -0.12
COPS4-206ENST00000509093 ABTB2Q8N961 1025 aa14.31□□□□□ -0.12
COPS4-206ENST00000509093 C1orf167Q5SNV9 1468 aa14.31□□□□□ -0.12
COPS4-206ENST00000509093 GOLGA2Q08379 1002 aa14.31□□□□□ -0.12
COPS4-206ENST00000509093 RRAGDQ9NQL2 400 aaPredicted RBP14.31□□□□□ -0.12
COPS4-206ENST00000509093 HMOX1P09601 288 aa14.3□□□□□ -0.12
COPS4-206ENST00000509093 WWC1Q8IX03 1113 aa14.3□□□□□ -0.12
COPS4-206ENST00000509093 MAP3K19Q56UN5 1328 aa14.3□□□□□ -0.12
COPS4-206ENST00000509093 PEAK1Q9H792 1746 aa14.3□□□□□ -0.12
COPS4-206ENST00000509093 SLFN5Q08AF3 891 aa14.3□□□□□ -0.12
COPS4-206ENST00000509093 DUSP27Q5VZP5 1158 aa14.3□□□□□ -0.12
COPS4-206ENST00000509093 VIRMAQ69YN4 1812 aaKnown RBP14.3□□□□□ -0.12
COPS4-206ENST00000509093 ATF3P18847 181 aa14.29□□□□□ -0.12
COPS4-206ENST00000509093 HSP90AB2PQ58FF8 381 aa14.29□□□□□ -0.12
COPS4-206ENST00000509093 MARF1Q9Y4F3 1742 aaKnown RBP14.29□□□□□ -0.12
COPS4-206ENST00000509093 MST1RQ04912 1400 aa14.29□□□□□ -0.12
COPS4-206ENST00000509093 C20orf194Q5TEA3 1177 aa14.29□□□□□ -0.12
COPS4-206ENST00000509093 DDX17Q92841 729 aaKnown RBP14.29□□□□□ -0.12
COPS4-206ENST00000509093 EIF4A2Q14240 407 aaKnown RBP14.28□□□□□ -0.12
COPS4-206ENST00000509093 PLEKHG5O94827 1062 aa14.27□□□□□ -0.12
COPS4-206ENST00000509093 PRKAR2BP31323 418 aa14.27□□□□□ -0.12
COPS4-206ENST00000509093 PHF23Q9BUL5 403 aaPredicted RBP14.27□□□□□ -0.12
COPS4-206ENST00000509093 TRMT2AQ8IZ69 625 aaKnown RBP14.27□□□□□ -0.13
COPS4-206ENST00000509093 FCHSD2O94868 740 aa14.26□□□□□ -0.13
COPS4-206ENST00000509093 TMPOP42166 694 aaKnown RBP14.26□□□□□ -0.13
COPS4-206ENST00000509093 PHACTR3Q96KR7 559 aa14.26□□□□□ -0.13
COPS4-206ENST00000509093 LRRC7Q96NW7 1537 aa14.26□□□□□ -0.13
COPS4-206ENST00000509093 NCOA3Q9Y6Q9 1424 aa14.26□□□□□ -0.13
COPS4-206ENST00000509093 XIRP1Q702N8 1843 aaKnown RBP14.26□□□□□ -0.13
COPS4-206ENST00000509093 KRT28Q7Z3Y7 464 aa14.25□□□□□ -0.13
COPS4-206ENST00000509093 NGEFQ8N5V2 710 aa14.25□□□□□ -0.13
COPS4-206ENST00000509093 MAPK8IP3Q9UPT6 1336 aa14.25□□□□□ -0.13
COPS4-206ENST00000509093 AEBP1Q8IUX7 1158 aa14.25□□□□□ -0.13
COPS4-206ENST00000509093 TRIM35Q9UPQ4 493 aa14.24□□□□□ -0.13
COPS4-206ENST00000509093 MSH6P52701 1360 aa14.24□□□□□ -0.13
COPS4-206ENST00000509093 DCCP43146 1447 aa14.24□□□□□ -0.13
COPS4-206ENST00000509093 AMPHP49418 695 aa14.24□□□□□ -0.13
COPS4-206ENST00000509093 CCDC27Q2M243 656 aa14.24□□□□□ -0.13
COPS4-206ENST00000509093 LMOD2Q6P5Q4 547 aa14.24□□□□□ -0.13
COPS4-206ENST00000509093 CADPS2Q86UW7 1296 aa14.24□□□□□ -0.13
COPS4-206ENST00000509093 SBNO1A3KN83 1393 aa14.23□□□□□ -0.13
COPS4-206ENST00000509093 E9PSI1 815 aa14.23□□□□□ -0.13
COPS4-206ENST00000509093 USP54Q70EL1 1684 aa14.23□□□□□ -0.13
COPS4-206ENST00000509093 RIPK4P57078 832 aa14.22□□□□□ -0.13
COPS4-206ENST00000509093 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.22□□□□□ -0.13
COPS4-206ENST00000509093 FLT4P35916 1363 aa14.22□□□□□ -0.13
COPS4-206ENST00000509093 BECN1Q14457 450 aa14.22□□□□□ -0.13
COPS4-206ENST00000509093 SULT6B1Q6IMI4 303 aa14.22□□□□□ -0.13
COPS4-206ENST00000509093 USP19O94966 1318 aa14.22□□□□□ -0.13
COPS4-206ENST00000509093 RRP9O43818 475 aaKnown RBP14.21□□□□□ -0.13
COPS4-206ENST00000509093 HOXC9P31274 260 aa14.21□□□□□ -0.13
COPS4-206ENST00000509093 RGS3P49796 1198 aa14.21□□□□□ -0.13
COPS4-206ENST00000509093 WDR63Q8IWG1 891 aa14.21□□□□□ -0.13
COPS4-206ENST00000509093 TRPM3Q9HCF6 1732 aaPredicted RBP14.21□□□□□ -0.13
COPS4-206ENST00000509093 CLCN1P35523 988 aa14.21□□□□□ -0.14
COPS4-206ENST00000509093 PNNQ9H307 717 aaKnown RBP14.21□□□□□ -0.14
COPS4-206ENST00000509093 KIF1AQ12756 1690 aa14.21□□□□□ -0.14
COPS4-206ENST00000509093 ZBTB7CA1YPR0 619 aa14.2□□□□□ -0.14
COPS4-206ENST00000509093 NAP1L5Q96NT1 182 aaPredicted RBP14.2□□□□□ -0.14
COPS4-206ENST00000509093 NFAT5O94916 1531 aa14.19□□□□□ -0.14
COPS4-206ENST00000509093 NCBP3Q53F19 620 aaKnown RBP14.19□□□□□ -0.14
COPS4-206ENST00000509093 VSIG10Q8N0Z9 540 aa14.19□□□□□ -0.14
COPS4-206ENST00000509093 LTV1Q96GA3 475 aaPredicted RBP14.19□□□□□ -0.14
COPS4-206ENST00000509093 NFE2L2Q16236 605 aa14.18□□□□□ -0.14
COPS4-206ENST00000509093 EYA1Q99502 592 aa14.18□□□□□ -0.14
COPS4-206ENST00000509093 THUMPD2Q9BTF0 503 aaKnown RBP14.18□□□□□ -0.14
COPS4-206ENST00000509093 ZMYND15Q9H091 742 aa14.18□□□□□ -0.14
COPS4-206ENST00000509093 RGPD1P0DJD0 1748 aa14.18□□□□□ -0.14
COPS4-206ENST00000509093 GCP02774 474 aa14.18□□□□□ -0.14
COPS4-206ENST00000509093 HSP90AA2PQ14568 343 aaPredicted RBP14.18□□□□□ -0.14
COPS4-206ENST00000509093 BRINP3Q76B58 766 aa14.18□□□□□ -0.14
COPS4-206ENST00000509093 HSP90AA1P07900 732 aaKnown RBP14.17□□□□□ -0.14
COPS4-206ENST00000509093 TSR2Q969E8 191 aaKnown RBP14.17□□□□□ -0.14
COPS4-206ENST00000509093 FSD2A1L4K1 749 aa14.16□□□□□ -0.14
COPS4-206ENST00000509093 ANTXR1Q9H6X2 564 aa14.16□□□□□ -0.14
COPS4-206ENST00000509093 SLAIN2Q9P270 581 aa14.16□□□□□ -0.14
COPS4-206ENST00000509093 GOLGA6L3A6NEY3 463 aa14.16□□□□□ -0.14
COPS4-206ENST00000509093 KCNH5Q8NCM2 988 aa14.16□□□□□ -0.14
COPS4-206ENST00000509093 IP6K1Q92551 441 aa14.16□□□□□ -0.14
COPS4-206ENST00000509093 FAM83GA6ND36 823 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms