RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 LMO7Q8WWI1 1683 aa9.33□□□□□ -0.92
HMGN1P16-201ENST00000508308 QRICH2Q9H0J4 1663 aa9.33□□□□□ -0.92
HMGN1P16-201ENST00000508308 CAMTA1Q9Y6Y1 1673 aa9.33□□□□□ -0.92
HMGN1P16-201ENST00000508308 ZC3H6P61129 1189 aaKnown RBP9.33□□□□□ -0.92
HMGN1P16-201ENST00000508308 CABP2Q9NPB3 220 aa9.33□□□□□ -0.92
HMGN1P16-201ENST00000508308 PPIP5K1Q6PFW1 1433 aa9.32□□□□□ -0.92
HMGN1P16-201ENST00000508308 TRPM1Q7Z4N2 1603 aa9.32□□□□□ -0.92
HMGN1P16-201ENST00000508308 KCNA4P22459 653 aa9.32□□□□□ -0.92
HMGN1P16-201ENST00000508308 CPDO75976 1380 aa9.32□□□□□ -0.92
HMGN1P16-201ENST00000508308 SSH2Q76I76 1423 aa9.31□□□□□ -0.92
HMGN1P16-201ENST00000508308 TNS1Q9HBL0 1735 aaKnown RBP9.31□□□□□ -0.92
HMGN1P16-201ENST00000508308 A0A0G2JS52 829 aa9.31□□□□□ -0.92
HMGN1P16-201ENST00000508308 SRPK2P78362 688 aaKnown RBP9.31□□□□□ -0.92
HMGN1P16-201ENST00000508308 MYT1Q01538 1121 aa9.31□□□□□ -0.92
HMGN1P16-201ENST00000508308 PELP1Q8IZL8 1130 aaKnown RBP9.31□□□□□ -0.92
HMGN1P16-201ENST00000508308 ABTB2Q8N961 1025 aa9.31□□□□□ -0.92
HMGN1P16-201ENST00000508308 STRN4Q9NRL3 753 aa9.31□□□□□ -0.92
HMGN1P16-201ENST00000508308 CABP1Q9NZU7 370 aa9.31□□□□□ -0.92
HMGN1P16-201ENST00000508308 GCP02774 474 aa9.3□□□□□ -0.92
HMGN1P16-201ENST00000508308 EN1Q05925 392 aaPredicted RBP9.3□□□□□ -0.92
HMGN1P16-201ENST00000508308 LARP1Q6PKG0 1096 aaKnown RBP9.3□□□□□ -0.92
HMGN1P16-201ENST00000508308 ZNF692Q9BU19 519 aaPredicted RBP9.3□□□□□ -0.92
HMGN1P16-201ENST00000508308 RGPD1P0DJD0 1748 aa9.3□□□□□ -0.92
HMGN1P16-201ENST00000508308 USP6P35125 1406 aa9.3□□□□□ -0.92
HMGN1P16-201ENST00000508308 SF3B2Q13435 895 aaKnown RBP9.29□□□□□ -0.92
HMGN1P16-201ENST00000508308 COL18A1P39060 1754 aa9.29□□□□□ -0.92
HMGN1P16-201ENST00000508308 DISP2A7MBM2 1401 aa9.29□□□□□ -0.92
HMGN1P16-201ENST00000508308 PIK3C2AO00443 1686 aa9.29□□□□□ -0.92
HMGN1P16-201ENST00000508308 SLIT3O75094 1523 aa9.28□□□□□ -0.92
HMGN1P16-201ENST00000508308 BAG6P46379 1132 aa9.28□□□□□ -0.92
HMGN1P16-201ENST00000508308 MMRN1Q13201 1228 aa9.28□□□□□ -0.92
HMGN1P16-201ENST00000508308 BARGINQ6ZT62 677 aa9.28□□□□□ -0.92
HMGN1P16-201ENST00000508308 NLRP13Q86W25 1043 aa9.28□□□□□ -0.92
HMGN1P16-201ENST00000508308 USP35Q9P2H5 1018 aa9.28□□□□□ -0.92
HMGN1P16-201ENST00000508308 COL5A2P05997 1499 aaPredicted RBP9.28□□□□□ -0.92
HMGN1P16-201ENST00000508308 BRD4O60885 1362 aaPredicted RBP9.27□□□□□ -0.93
HMGN1P16-201ENST00000508308 PSDA5PKW4 1024 aaPredicted RBP9.27□□□□□ -0.93
HMGN1P16-201ENST00000508308 NEUROD1Q13562 356 aa9.27□□□□□ -0.93
HMGN1P16-201ENST00000508308 CAMKK2Q96RR4 588 aa9.27□□□□□ -0.93
HMGN1P16-201ENST00000508308 LRP5O75197 1615 aa9.27□□□□□ -0.93
HMGN1P16-201ENST00000508308 TRIM37O94972 964 aa9.26□□□□□ -0.93
HMGN1P16-201ENST00000508308 EVA1CP58658 441 aa9.26□□□□□ -0.93
HMGN1P16-201ENST00000508308 NLRP6P59044 892 aa9.26□□□□□ -0.93
HMGN1P16-201ENST00000508308 EZH2Q15910 746 aaKnown RBP9.26□□□□□ -0.93
HMGN1P16-201ENST00000508308 FAM196AQ6ZSG2 479 aa9.26□□□□□ -0.93
HMGN1P16-201ENST00000508308 AXIN2Q9Y2T1 843 aa9.26□□□□□ -0.93
HMGN1P16-201ENST00000508308 AKAP12Q02952 1782 aa9.26□□□□□ -0.93
HMGN1P16-201ENST00000508308 ROCK2O75116 1388 aaKnown RBP9.25□□□□□ -0.93
HMGN1P16-201ENST00000508308 AATKQ6ZMQ8 1374 aa9.25□□□□□ -0.93
HMGN1P16-201ENST00000508308 PARP4Q9UKK3 1724 aaKnown RBP9.25□□□□□ -0.93
HMGN1P16-201ENST00000508308 CPSF1Q10570 1443 aaKnown RBP9.25□□□□□ -0.93
HMGN1P16-201ENST00000508308 TCP11L2Q8N4U5 519 aa9.25□□□□□ -0.93
HMGN1P16-201ENST00000508308 TTC21BQ7Z4L5 1316 aa9.25□□□□□ -0.93
HMGN1P16-201ENST00000508308 EVC2Q86UK5 1308 aa9.25□□□□□ -0.93
HMGN1P16-201ENST00000508308 PEAK1Q9H792 1746 aa9.25□□□□□ -0.93
HMGN1P16-201ENST00000508308 R3HDM1Q15032 1099 aaKnown RBP9.24□□□□□ -0.93
HMGN1P16-201ENST00000508308 METRNQ9UJH8 293 aa9.24□□□□□ -0.93
HMGN1P16-201ENST00000508308 RGPD5Q99666 1765 aa9.24□□□□□ -0.93
HMGN1P16-201ENST00000508308 CRB1P82279 1406 aa9.23□□□□□ -0.93
HMGN1P16-201ENST00000508308 RREB1Q92766 1687 aa9.23□□□□□ -0.93
HMGN1P16-201ENST00000508308 CD163L1Q9NR16 1453 aa9.23□□□□□ -0.93
HMGN1P16-201ENST00000508308 NFAT5O94916 1531 aa9.23□□□□□ -0.93
HMGN1P16-201ENST00000508308 ARHGEF25Q86VW2 580 aa9.23□□□□□ -0.93
HMGN1P16-201ENST00000508308 THRAP3Q9Y2W1 955 aaKnown RBP9.23□□□□□ -0.93
HMGN1P16-201ENST00000508308 MON2Q7Z3U7 1717 aa9.22□□□□□ -0.93
HMGN1P16-201ENST00000508308 SBF2Q86WG5 1849 aa9.22□□□□□ -0.93
HMGN1P16-201ENST00000508308 APBA3O96018 575 aa9.22□□□□□ -0.93
HMGN1P16-201ENST00000508308 PDE3BQ13370 1112 aa9.22□□□□□ -0.93
HMGN1P16-201ENST00000508308 PTF1AQ7RTS3 328 aa9.22□□□□□ -0.93
HMGN1P16-201ENST00000508308 LRRC37A3O60309 1634 aa9.22□□□□□ -0.93
HMGN1P16-201ENST00000508308 SBNO2Q9Y2G9 1366 aa9.22□□□□□ -0.93
HMGN1P16-201ENST00000508308 NUP188Q5SRE5 1749 aa9.22□□□□□ -0.93
HMGN1P16-201ENST00000508308 WNK3Q9BYP7 1800 aa9.21□□□□□ -0.93
HMGN1P16-201ENST00000508308 ZBTB7CA1YPR0 619 aa9.21□□□□□ -0.94
HMGN1P16-201ENST00000508308 WDR17Q8IZU2 1322 aa9.21□□□□□ -0.94
HMGN1P16-201ENST00000508308 SCUBE2Q9NQ36 999 aa9.2□□□□□ -0.94
HMGN1P16-201ENST00000508308 TTC21AQ8NDW8 1320 aa9.2□□□□□ -0.94
HMGN1P16-201ENST00000508308 KTN1Q86UP2 1357 aaKnown RBP9.2□□□□□ -0.94
HMGN1P16-201ENST00000508308 PARD3Q8TEW0 1356 aa9.2□□□□□ -0.94
HMGN1P16-201ENST00000508308 USP54Q70EL1 1684 aa9.2□□□□□ -0.94
HMGN1P16-201ENST00000508308 SOX12O15370 315 aa9.19□□□□□ -0.94
HMGN1P16-201ENST00000508308 C7P10643 843 aa9.19□□□□□ -0.94
HMGN1P16-201ENST00000508308 TOM1L2Q6ZVM7 507 aa9.19□□□□□ -0.94
HMGN1P16-201ENST00000508308 MARCH10Q8NA82 808 aaPredicted RBP9.19□□□□□ -0.94
HMGN1P16-201ENST00000508308 CARD11Q9BXL7 1154 aa9.19□□□□□ -0.94
HMGN1P16-201ENST00000508308 USP31Q70CQ4 1352 aa9.19□□□□□ -0.94
HMGN1P16-201ENST00000508308 OVOS2A0A0G2JMS6 1433 aa9.18□□□□□ -0.94
HMGN1P16-201ENST00000508308 OVOS2A0A0J9YW53 1432 aa9.18□□□□□ -0.94
HMGN1P16-201ENST00000508308 OVOS2Q6IE36 1432 aa9.18□□□□□ -0.94
HMGN1P16-201ENST00000508308 NME9Q86XW9 330 aa9.18□□□□□ -0.94
HMGN1P16-201ENST00000508308 SPNS2Q8IVW8 549 aa9.18□□□□□ -0.94
HMGN1P16-201ENST00000508308 PROM2Q8N271 834 aa9.18□□□□□ -0.94
HMGN1P16-201ENST00000508308 KCNH5Q8NCM2 988 aa9.18□□□□□ -0.94
HMGN1P16-201ENST00000508308 SLC39A7Q92504 469 aa9.18□□□□□ -0.94
HMGN1P16-201ENST00000508308 CARD10Q9BWT7 1032 aa9.18□□□□□ -0.94
HMGN1P16-201ENST00000508308 SLC12A5Q9H2X9 1139 aa9.18□□□□□ -0.94
HMGN1P16-201ENST00000508308 BCL9O00512 1426 aa9.17□□□□□ -0.94
HMGN1P16-201ENST00000508308 DDB1Q16531 1140 aa9.17□□□□□ -0.94
HMGN1P16-201ENST00000508308 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.17□□□□□ -0.94
HMGN1P16-201ENST00000508308 TESK2Q96S53 571 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms