RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 MYO1CO00159 1063 aa13.06□□□□□ -0.32
PDLIM5-210ENST00000508216 IPO8O15397 1037 aaKnown RBP13.06□□□□□ -0.32
PDLIM5-210ENST00000508216 IRX1P78414 480 aaPredicted RBP13.06□□□□□ -0.32
PDLIM5-210ENST00000508216 MS4A3Q96HJ5 214 aa13.06□□□□□ -0.32
PDLIM5-210ENST00000508216 BIRC2Q13490 618 aa13.05□□□□□ -0.32
PDLIM5-210ENST00000508216 NOLC1Q14978 699 aaKnown RBP eCLIP13.05□□□□□ -0.32
PDLIM5-210ENST00000508216 DNAJC21Q5F1R6 531 aaKnown RBP13.05□□□□□ -0.32
PDLIM5-210ENST00000508216 C1QTNF12Q5T7M4 302 aa13.05□□□□□ -0.32
PDLIM5-210ENST00000508216 MSL3Q8N5Y2 521 aaKnown RBP13.05□□□□□ -0.32
PDLIM5-210ENST00000508216 SYNJ1O43426 1573 aa13.05□□□□□ -0.32
PDLIM5-210ENST00000508216 CCDC7Q96M83 1385 aa13.05□□□□□ -0.32
PDLIM5-210ENST00000508216 ANKRD18BA2A2Z9 1011 aa13.04□□□□□ -0.32
PDLIM5-210ENST00000508216 ERCC3P19447 782 aa13.04□□□□□ -0.32
PDLIM5-210ENST00000508216 NOM1Q5C9Z4 860 aaKnown RBP13.04□□□□□ -0.32
PDLIM5-210ENST00000508216 ARHGEF1Q92888 912 aaKnown RBP13.04□□□□□ -0.32
PDLIM5-210ENST00000508216 CWC15Q9P013 229 aaKnown RBP13.04□□□□□ -0.32
PDLIM5-210ENST00000508216 PLEKHH2Q8IVE3 1493 aa13.04□□□□□ -0.32
PDLIM5-210ENST00000508216 PDAP1Q13442 181 aaKnown RBP13.04□□□□□ -0.32
PDLIM5-210ENST00000508216 MCTP2Q6DN12 878 aa13.04□□□□□ -0.32
PDLIM5-210ENST00000508216 FAM184AQ8NB25 1140 aa13.04□□□□□ -0.32
PDLIM5-210ENST00000508216 KIF1BPQ96EK5 621 aa13.04□□□□□ -0.32
PDLIM5-210ENST00000508216 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.04□□□□□ -0.32
PDLIM5-210ENST00000508216 BAZ1AQ9NRL2 1556 aaPredicted RBP13.04□□□□□ -0.32
PDLIM5-210ENST00000508216 MIA2Q96PC5 1412 aa13.03□□□□□ -0.32
PDLIM5-210ENST00000508216 H0YHG0 523 aa13.03□□□□□ -0.32
PDLIM5-210ENST00000508216 C21orf2O43822 256 aa13.03□□□□□ -0.32
PDLIM5-210ENST00000508216 CD151P48509 253 aa13.03□□□□□ -0.32
PDLIM5-210ENST00000508216 SARNPP82979 210 aaKnown RBP13.03□□□□□ -0.32
PDLIM5-210ENST00000508216 IQUBQ8NA54 791 aa13.03□□□□□ -0.32
PDLIM5-210ENST00000508216 NUB1Q9Y5A7 615 aa13.03□□□□□ -0.32
PDLIM5-210ENST00000508216 DDX49Q9Y6V7 483 aaKnown RBP13.03□□□□□ -0.32
PDLIM5-210ENST00000508216 TONSLQ96HA7 1378 aa13.03□□□□□ -0.32
PDLIM5-210ENST00000508216 RAB3GAP1Q15042 981 aa13.02□□□□□ -0.32
PDLIM5-210ENST00000508216 SLFNL1Q499Z3 407 aa13.02□□□□□ -0.32
PDLIM5-210ENST00000508216 JAKMIP3Q5VZ66 844 aa13.02□□□□□ -0.32
PDLIM5-210ENST00000508216 EXOC8Q8IYI6 725 aa13.02□□□□□ -0.32
PDLIM5-210ENST00000508216 ZNF446Q9NWS9 450 aa13.02□□□□□ -0.32
PDLIM5-210ENST00000508216 PLEKHG2Q9H7P9 1386 aa13.02□□□□□ -0.32
PDLIM5-210ENST00000508216 EIF3JO75822 258 aaKnown RBP13.02□□□□□ -0.33
PDLIM5-210ENST00000508216 TPM3P06753 285 aa13.02□□□□□ -0.33
PDLIM5-210ENST00000508216 MYBPC2Q14324 1141 aa13.02□□□□□ -0.33
PDLIM5-210ENST00000508216 ZSCAN26Q16670 478 aa13.02□□□□□ -0.33
PDLIM5-210ENST00000508216 GALR2O43603 387 aaPredicted RBP13.01□□□□□ -0.33
PDLIM5-210ENST00000508216 CPP00450 1065 aa13.01□□□□□ -0.33
PDLIM5-210ENST00000508216 MAP2K2P36507 400 aa13.01□□□□□ -0.33
PDLIM5-210ENST00000508216 NCBP1Q09161 790 aaKnown RBP13.01□□□□□ -0.33
PDLIM5-210ENST00000508216 TTC31Q49AM3 519 aaPredicted RBP13.01□□□□□ -0.33
PDLIM5-210ENST00000508216 SDR16C5Q8N3Y7 309 aa13.01□□□□□ -0.33
PDLIM5-210ENST00000508216 RTEL1-TNFRSF6BF6WH68 1400 aa13□□□□□ -0.33
PDLIM5-210ENST00000508216 INHBEP58166 350 aa13□□□□□ -0.33
PDLIM5-210ENST00000508216 FAM50AQ14320 339 aaKnown RBP13□□□□□ -0.33
PDLIM5-210ENST00000508216 SMC5Q8IY18 1101 aa13□□□□□ -0.33
PDLIM5-210ENST00000508216 ANKRD20A12PQ8NF67 263 aa13□□□□□ -0.33
PDLIM5-210ENST00000508216 SUDS3Q9H7L9 328 aaPredicted RBP13□□□□□ -0.33
PDLIM5-210ENST00000508216 SMC3Q9UQE7 1217 aa13□□□□□ -0.33
PDLIM5-210ENST00000508216 GABBR2O75899 941 aa12.99□□□□□ -0.33
PDLIM5-210ENST00000508216 MAGEA9P43362 315 aa12.99□□□□□ -0.33
PDLIM5-210ENST00000508216 SRLQ86TD4 932 aa12.99□□□□□ -0.33
PDLIM5-210ENST00000508216 CHGAP10645 457 aaKnown RBP12.99□□□□□ -0.33
PDLIM5-210ENST00000508216 HS6ST3Q8IZP7 471 aa12.99□□□□□ -0.33
PDLIM5-210ENST00000508216 NFATC2IPQ8NCF5 419 aa12.99□□□□□ -0.33
PDLIM5-210ENST00000508216 STAG1Q8WVM7 1258 aa12.99□□□□□ -0.33
PDLIM5-210ENST00000508216 TSC1Q92574 1164 aa12.99□□□□□ -0.33
PDLIM5-210ENST00000508216 EIF3AQ14152 1382 aaKnown RBP12.98□□□□□ -0.33
PDLIM5-210ENST00000508216 DHX29Q7Z478 1369 aaKnown RBP12.98□□□□□ -0.33
PDLIM5-210ENST00000508216 SP7Q8TDD2 431 aaPredicted RBP12.98□□□□□ -0.33
PDLIM5-210ENST00000508216 SNX21Q969T3 373 aa12.98□□□□□ -0.33
PDLIM5-210ENST00000508216 HIRIP3Q9BW71 556 aaPredicted RBP12.98□□□□□ -0.33
PDLIM5-210ENST00000508216 ERCC6Q03468 1493 aa12.98□□□□□ -0.33
PDLIM5-210ENST00000508216 ERICH4A6NGS2 130 aa12.97□□□□□ -0.33
PDLIM5-210ENST00000508216 PAX7P23759 505 aa12.97□□□□□ -0.33
PDLIM5-210ENST00000508216 PPP2R5AQ15172 486 aa12.97□□□□□ -0.33
PDLIM5-210ENST00000508216 ZNF397Q8NF99 534 aaPredicted RBP12.97□□□□□ -0.33
PDLIM5-210ENST00000508216 CRBNQ96SW2 442 aa12.97□□□□□ -0.33
PDLIM5-210ENST00000508216 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.97□□□□□ -0.332e-8■■■■□ 25.8
PDLIM5-210ENST00000508216 MAGEA8P43361 318 aa12.97□□□□□ -0.33
PDLIM5-210ENST00000508216 DNAJC14Q6Y2X3 702 aaPredicted RBP12.97□□□□□ -0.33
PDLIM5-210ENST00000508216 ARMCX6Q7L4S7 300 aa12.97□□□□□ -0.33
PDLIM5-210ENST00000508216 TATDN2Q93075 761 aa12.97□□□□□ -0.33
PDLIM5-210ENST00000508216 DRC1Q96MC2 740 aa12.97□□□□□ -0.33
PDLIM5-210ENST00000508216 V9GYY5 206 aaPredicted RBP12.97□□□□□ -0.33
PDLIM5-210ENST00000508216 STK25O00506 426 aa12.96□□□□□ -0.34
PDLIM5-210ENST00000508216 ADCY2Q08462 1091 aa12.96□□□□□ -0.34
PDLIM5-210ENST00000508216 SYT10Q6XYQ8 523 aa12.96□□□□□ -0.34
PDLIM5-210ENST00000508216 NLRP13Q86W25 1043 aa12.96□□□□□ -0.34
PDLIM5-210ENST00000508216 KLHL23Q8NBE8 558 aa12.96□□□□□ -0.34
PDLIM5-210ENST00000508216 ETAA1Q9NY74 926 aa12.96□□□□□ -0.34
PDLIM5-210ENST00000508216 SOGA1O94964 1423 aa12.96□□□□□ -0.34
PDLIM5-210ENST00000508216 SGSM2O43147 1006 aa12.95□□□□□ -0.34
PDLIM5-210ENST00000508216 ZRSR2Q15696 482 aaKnown RBP12.95□□□□□ -0.34
PDLIM5-210ENST00000508216 MMS22LQ6ZRQ5 1243 aa12.95□□□□□ -0.34
PDLIM5-210ENST00000508216 DDX46Q7L014 1031 aaKnown RBP12.95□□□□□ -0.34
PDLIM5-210ENST00000508216 JARID2Q92833 1246 aaPredicted RBP12.95□□□□□ -0.34
PDLIM5-210ENST00000508216 A1CFQ9NQ94 594 aaKnown RBP12.95□□□□□ -0.34
PDLIM5-210ENST00000508216 TOMM22Q9NS69 142 aa12.95□□□□□ -0.34
PDLIM5-210ENST00000508216 SRPK2P78362 688 aaKnown RBP12.94□□□□□ -0.34
PDLIM5-210ENST00000508216 NUCB2P80303 420 aa12.94□□□□□ -0.34
PDLIM5-210ENST00000508216 CDC37Q16543 378 aaPredicted RBP12.94□□□□□ -0.34
PDLIM5-210ENST00000508216 NUTM1Q86Y26 1132 aa12.94□□□□□ -0.34
PDLIM5-210ENST00000508216 TRPC6Q9Y210 931 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms