RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 BRD4O60885 1362 aaPredicted RBP11.72□□□□□ -0.53
NEK1-203ENST00000507142 TAF7Q15545 349 aaPredicted RBP11.72□□□□□ -0.53
NEK1-203ENST00000507142 CCDC27Q2M243 656 aa11.72□□□□□ -0.53
NEK1-203ENST00000507142 MPHOSPH8Q99549 860 aa11.72□□□□□ -0.53
NEK1-203ENST00000507142 FYB1O15117 783 aa11.71□□□□□ -0.53
NEK1-203ENST00000507142 TSR2Q969E8 191 aaKnown RBP11.71□□□□□ -0.53
NEK1-203ENST00000507142 ARAP3Q8WWN8 1544 aa11.71□□□□□ -0.53
NEK1-203ENST00000507142 EXOSC9Q06265 439 aaKnown RBP11.71□□□□□ -0.53
NEK1-203ENST00000507142 TPRNQ4KMQ1 711 aa11.71□□□□□ -0.53
NEK1-203ENST00000507142 TEX13AQ9BXU3 409 aaPredicted RBP11.71□□□□□ -0.53
NEK1-203ENST00000507142 PRAG1Q86YV5 1406 aa11.71□□□□□ -0.54
NEK1-203ENST00000507142 ZNF622Q969S3 477 aaKnown RBP eCLIP11.71□□□□□ -0.546e-7■□□□□ 8.9
NEK1-203ENST00000507142 WWC3Q9ULE0 1092 aa11.7□□□□□ -0.54
NEK1-203ENST00000507142 KIF16BQ96L93 1317 aa11.7□□□□□ -0.54
NEK1-203ENST00000507142 LRRFIP1Q32MZ4 808 aaKnown RBP11.7□□□□□ -0.54
NEK1-203ENST00000507142 THUMPD2Q9BTF0 503 aaKnown RBP11.7□□□□□ -0.54
NEK1-203ENST00000507142 PPP4R2Q9NY27 417 aa11.7□□□□□ -0.54
NEK1-203ENST00000507142 RPGRQ92834 1020 aaKnown RBP11.7□□□□□ -0.54
NEK1-203ENST00000507142 DZIP1LQ8IYY4 767 aaKnown RBP11.7□□□□□ -0.54
NEK1-203ENST00000507142 CCDC85AQ96PX6 553 aaPredicted RBP11.7□□□□□ -0.54
NEK1-203ENST00000507142 METP08581 1390 aa11.69□□□□□ -0.54
NEK1-203ENST00000507142 A0A087WZG4 1122 aa11.69□□□□□ -0.54
NEK1-203ENST00000507142 RBM5P52756 815 aaKnown RBP eCLIP11.69□□□□□ -0.54
NEK1-203ENST00000507142 CFAP44Q96MT7 982 aa11.69□□□□□ -0.54
NEK1-203ENST00000507142 COG6Q9Y2V7 657 aa11.69□□□□□ -0.54
NEK1-203ENST00000507142 ANKRD36BQ8N2N9 1353 aa11.69□□□□□ -0.54
NEK1-203ENST00000507142 APPP05067 770 aa11.69□□□□□ -0.54
NEK1-203ENST00000507142 PZPP20742 1482 aa11.69□□□□□ -0.54
NEK1-203ENST00000507142 SAMD1Q6SPF0 538 aaPredicted RBP11.68□□□□□ -0.54
NEK1-203ENST00000507142 NSD2O96028 1365 aa11.68□□□□□ -0.54
NEK1-203ENST00000507142 A2ML1A8K2U0 1454 aa11.68□□□□□ -0.54
NEK1-203ENST00000507142 PTPRMP28827 1452 aa11.68□□□□□ -0.54
NEK1-203ENST00000507142 BECN1Q14457 450 aa11.68□□□□□ -0.54
NEK1-203ENST00000507142 RILPL2Q969X0 211 aa11.68□□□□□ -0.54
NEK1-203ENST00000507142 KDM4FA0A1W2PPD8 638 aa11.68□□□□□ -0.54
NEK1-203ENST00000507142 IP6K1Q92551 441 aa11.68□□□□□ -0.54
NEK1-203ENST00000507142 ABCC11Q96J66 1382 aa11.67□□□□□ -0.54
NEK1-203ENST00000507142 GNL2Q13823 731 aaKnown RBP11.67□□□□□ -0.54
NEK1-203ENST00000507142 CCDC57Q2TAC2 916 aa11.67□□□□□ -0.54
NEK1-203ENST00000507142 ANKRD45Q5TZF3 282 aa11.67□□□□□ -0.54
NEK1-203ENST00000507142 ABCA9Q8IUA7 1624 aa11.67□□□□□ -0.54
NEK1-203ENST00000507142 PLEKHH1Q9ULM0 1364 aa11.67□□□□□ -0.54
NEK1-203ENST00000507142 TMPOP42166 694 aaKnown RBP11.67□□□□□ -0.54
NEK1-203ENST00000507142 PAXIP1Q6ZW49 1069 aaPredicted RBP11.67□□□□□ -0.54
NEK1-203ENST00000507142 DDX19BQ9UMR2 479 aa11.67□□□□□ -0.54
NEK1-203ENST00000507142 GPTP24298 496 aa11.67□□□□□ -0.54
NEK1-203ENST00000507142 IGHMBP2P38935 993 aaKnown RBP11.67□□□□□ -0.54
NEK1-203ENST00000507142 HSP90AB4PQ58FF6 505 aa11.67□□□□□ -0.54
NEK1-203ENST00000507142 GNL3LQ9NVN8 582 aaKnown RBP11.67□□□□□ -0.54
NEK1-203ENST00000507142 CCNL1Q9UK58 526 aaPredicted RBP11.67□□□□□ -0.54
NEK1-203ENST00000507142 RTCBQ9Y3I0 505 aaKnown RBP11.67□□□□□ -0.54
NEK1-203ENST00000507142 HOXC9P31274 260 aa11.66□□□□□ -0.54
NEK1-203ENST00000507142 NCLP19338 710 aaKnown RBP11.66□□□□□ -0.54
NEK1-203ENST00000507142 HSPA1LP34931 641 aa11.66□□□□□ -0.54
NEK1-203ENST00000507142 ST5P78524 1137 aa11.66□□□□□ -0.54
NEK1-203ENST00000507142 SRCIN1Q9C0H9 1055 aa11.66□□□□□ -0.54
NEK1-203ENST00000507142 TRMT112Q9UI30 125 aaKnown RBP11.66□□□□□ -0.54
NEK1-203ENST00000507142 PCDH11XQ9BZA7 1347 aa11.66□□□□□ -0.54
NEK1-203ENST00000507142 PCDH11YQ9BZA8 1340 aa11.66□□□□□ -0.54
NEK1-203ENST00000507142 ZBTB3Q9H5J0 574 aa11.66□□□□□ -0.54
NEK1-203ENST00000507142 DIP2BQ9P265 1576 aa11.66□□□□□ -0.54
NEK1-203ENST00000507142 FLT4P35916 1363 aa11.66□□□□□ -0.54
NEK1-203ENST00000507142 HSP90AB3PQ58FF7 597 aa11.65□□□□□ -0.54
NEK1-203ENST00000507142 SIRT1Q96EB6 747 aa11.65□□□□□ -0.54
NEK1-203ENST00000507142 PARP3Q9Y6F1 533 aa11.65□□□□□ -0.54
NEK1-203ENST00000507142 SHROOM2Q13796 1616 aa11.65□□□□□ -0.54
NEK1-203ENST00000507142 GNAI3P08754 354 aa11.65□□□□□ -0.54
NEK1-203ENST00000507142 ABCC3O15438 1527 aa11.65□□□□□ -0.54
NEK1-203ENST00000507142 DUSP27Q5VZP5 1158 aa11.65□□□□□ -0.54
NEK1-203ENST00000507142 BRINP3Q76B58 766 aa11.65□□□□□ -0.54
NEK1-203ENST00000507142 SLC39A6Q13433 755 aa11.64□□□□□ -0.55
NEK1-203ENST00000507142 NBPF6Q5VWK0 638 aa11.64□□□□□ -0.55
NEK1-203ENST00000507142 NBPF5PQ86XG9 351 aaPredicted RBP11.64□□□□□ -0.55
NEK1-203ENST00000507142 NBPF4Q96M43 638 aa11.64□□□□□ -0.55
NEK1-203ENST00000507142 EIF4A2Q14240 407 aaKnown RBP11.64□□□□□ -0.55
NEK1-203ENST00000507142 ANKIB1Q9P2G1 1089 aa11.64□□□□□ -0.55
NEK1-203ENST00000507142 MAP3K19Q56UN5 1328 aa11.64□□□□□ -0.55
NEK1-203ENST00000507142 C11orf95C9JLR9 678 aaPredicted RBP11.64□□□□□ -0.55
NEK1-203ENST00000507142 VPS53Q5VIR6 699 aa11.63□□□□□ -0.55
NEK1-203ENST00000507142 COL17A1Q9UMD9 1497 aaPredicted RBP11.63□□□□□ -0.55
NEK1-203ENST00000507142 GNPATO15228 680 aa11.63□□□□□ -0.55
NEK1-203ENST00000507142 SNRPA1P09661 255 aaKnown RBP11.63□□□□□ -0.55
NEK1-203ENST00000507142 MYD88Q99836 296 aa11.63□□□□□ -0.55
NEK1-203ENST00000507142 PUS7Q96PZ0 661 aaKnown RBP11.63□□□□□ -0.55
NEK1-203ENST00000507142 ZRSR1Q15695 479 aaKnown RBP11.63□□□□□ -0.55
NEK1-203ENST00000507142 SETDB2Q96T68 719 aa11.63□□□□□ -0.55
NEK1-203ENST00000507142 CDK11BP21127 795 aaKnown RBP11.62□□□□□ -0.55
NEK1-203ENST00000507142 AKAP4Q5JQC9 854 aa11.62□□□□□ -0.55
NEK1-203ENST00000507142 AFF2P51816 1311 aa11.62□□□□□ -0.55
NEK1-203ENST00000507142 SIL1Q9H173 461 aa11.62□□□□□ -0.55
NEK1-203ENST00000507142 A0A1W2PP64 1363 aa11.62□□□□□ -0.55
NEK1-203ENST00000507142 WASHC4Q2M389 1173 aa11.62□□□□□ -0.55
NEK1-203ENST00000507142 KRT27Q7Z3Y8 459 aa11.62□□□□□ -0.55
NEK1-203ENST00000507142 CCAR1Q8IX12 1150 aaKnown RBP11.62□□□□□ -0.55
NEK1-203ENST00000507142 DIAPH3Q9NSV4 1193 aa11.62□□□□□ -0.55
NEK1-203ENST00000507142 EIF2AK4Q9P2K8 1649 aaKnown RBP11.62□□□□□ -0.55
NEK1-203ENST00000507142 ADGBQ8N7X0 1667 aa11.62□□□□□ -0.55
NEK1-203ENST00000507142 SURF6O75683 361 aaKnown RBP11.62□□□□□ -0.55
NEK1-203ENST00000507142 CLSTN1O94985 981 aa11.62□□□□□ -0.55
NEK1-203ENST00000507142 PRIM1P49642 420 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms