RNA–Protein interactions for RNA: ENST00000505971.5

TRIO-207, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-207ENST00000505971 RREB1Q92766 1687 aa29.02■■■□□ 2.24
TRIO-207ENST00000505971 RGPD5Q99666 1765 aa29.02■■■□□ 2.24
TRIO-207ENST00000505971 NFAT5O94916 1531 aa29.01■■■□□ 2.23
TRIO-207ENST00000505971 TOM1L2Q6ZVM7 507 aa29.01■■■□□ 2.23
TRIO-207ENST00000505971 CD163L1Q9NR16 1453 aa29.01■■■□□ 2.23
TRIO-207ENST00000505971 USP31Q70CQ4 1352 aa29■■■□□ 2.23
TRIO-207ENST00000505971 LRRC37A3O60309 1634 aa28.99■■■□□ 2.23
TRIO-207ENST00000505971 SBF2Q86WG5 1849 aa28.98■■■□□ 2.23
TRIO-207ENST00000505971 WNK3Q9BYP7 1800 aa28.98■■■□□ 2.23
TRIO-207ENST00000505971 USP54Q70EL1 1684 aa28.98■■■□□ 2.23
TRIO-207ENST00000505971 OVOS2A0A0G2JMS6 1433 aa28.97■■■□□ 2.23
TRIO-207ENST00000505971 OVOS2A0A0J9YW53 1432 aa28.97■■■□□ 2.23
TRIO-207ENST00000505971 OVOS2Q6IE36 1432 aa28.97■■■□□ 2.23
TRIO-207ENST00000505971 NUP188Q5SRE5 1749 aa28.97■■■□□ 2.23
TRIO-207ENST00000505971 DDB1Q16531 1140 aa28.96■■■□□ 2.23
TRIO-207ENST00000505971 PUS7Q96PZ0 661 aaKnown RBP28.96■■■□□ 2.23
TRIO-207ENST00000505971 CDCA7Q9BWT1 371 aaPredicted RBP28.96■■■□□ 2.23
TRIO-207ENST00000505971 CARD10Q9BWT7 1032 aa28.96■■■□□ 2.23
TRIO-207ENST00000505971 ABCC6O95255 1503 aa28.95■■■□□ 2.23
TRIO-207ENST00000505971 TONSLQ96HA7 1378 aa28.95■■■□□ 2.22
TRIO-207ENST00000505971 BCL9O00512 1426 aa28.94■■■□□ 2.22
TRIO-207ENST00000505971 SOX12O15370 315 aa28.92■■■□□ 2.22
TRIO-207ENST00000505971 SLC12A5Q9H2X9 1139 aa28.91■■■□□ 2.22
TRIO-207ENST00000505971 RGPD3A6NKT7 1758 aaPredicted RBP28.9■■■□□ 2.22
TRIO-207ENST00000505971 RGPD4Q7Z3J3 1758 aa28.9■■■□□ 2.22
TRIO-207ENST00000505971 PLSCR1O15162 318 aa28.9■■■□□ 2.22
TRIO-207ENST00000505971 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.9■■■□□ 2.224e-7■■■□□ 16.8
TRIO-207ENST00000505971 MARCH10Q8NA82 808 aaPredicted RBP28.9■■■□□ 2.22
TRIO-207ENST00000505971 NME9Q86XW9 330 aa28.89■■■□□ 2.22
TRIO-207ENST00000505971 NBPF14Q5TI25 921 aa28.87■■■□□ 2.21
TRIO-207ENST00000505971 TMC1Q8TDI8 760 aa28.87■■■□□ 2.21
TRIO-207ENST00000505971 TESK2Q96S53 571 aa28.87■■■□□ 2.21
TRIO-207ENST00000505971 BCL11BQ9C0K0 894 aaPredicted RBP28.87■■■□□ 2.21
TRIO-207ENST00000505971 CCDC7Q96M83 1385 aa28.87■■■□□ 2.21
TRIO-207ENST00000505971 EDC4Q6P2E9 1401 aaKnown RBP28.86■■■□□ 2.21
TRIO-207ENST00000505971 CSB-PGBD3P0DP91 1061 aa28.86■■■□□ 2.21
TRIO-207ENST00000505971 HDGFL2Q7Z4V5 671 aaPredicted RBP28.86■■■□□ 2.21
TRIO-207ENST00000505971 PTF1AQ7RTS3 328 aa28.85■■■□□ 2.21
TRIO-207ENST00000505971 A0A1W2PP64 1363 aa28.84■■■□□ 2.21
TRIO-207ENST00000505971 LTN1O94822 1766 aa28.83■■■□□ 2.21
TRIO-207ENST00000505971 TERF2IPQ9NYB0 399 aa28.83■■■□□ 2.21
TRIO-207ENST00000505971 ERBB3P21860 1342 aa28.83■■■□□ 2.21
TRIO-207ENST00000505971 EXOC5O00471 708 aa28.81■■■□□ 2.2
TRIO-207ENST00000505971 ST20-MTHFSA0A0A6YYL1 179 aa28.8■■■□□ 2.2
TRIO-207ENST00000505971 PROM2Q8N271 834 aa28.8■■■□□ 2.2
TRIO-207ENST00000505971 NINLQ9Y2I6 1382 aa28.78■■■□□ 2.2
TRIO-207ENST00000505971 SLC24A1O60721 1099 aa28.78■■■□□ 2.2
TRIO-207ENST00000505971 TNS2Q63HR2 1409 aa28.77■■■□□ 2.2
TRIO-207ENST00000505971 TRIM26Q12899 539 aaPredicted RBP28.76■■■□□ 2.19
TRIO-207ENST00000505971 ANKRD24Q8TF21 1146 aa28.73■■■□□ 2.19
TRIO-207ENST00000505971 NLRP2Q9NX02 1062 aa28.73■■■□□ 2.19
TRIO-207ENST00000505971 ANO8Q9HCE9 1232 aaPredicted RBP28.72■■■□□ 2.19
TRIO-207ENST00000505971 IL2RBP14784 551 aa28.71■■■□□ 2.19
TRIO-207ENST00000505971 IP6K1Q92551 441 aa28.71■■■□□ 2.19
TRIO-207ENST00000505971 KCNQ2O43526 872 aa28.69■■■□□ 2.18
TRIO-207ENST00000505971 SPON1Q9HCB6 807 aa28.69■■■□□ 2.18
TRIO-207ENST00000505971 CASZ1Q86V15 1759 aa28.67■■■□□ 2.18
TRIO-207ENST00000505971 NHSQ6T4R5 1651 aa28.67■■■□□ 2.18
TRIO-207ENST00000505971 TXNRD1Q16881 649 aa28.67■■■□□ 2.18
TRIO-207ENST00000505971 ANKRD36BQ8N2N9 1353 aa28.65■■■□□ 2.18
TRIO-207ENST00000505971 COG3Q96JB2 828 aa28.64■■■□□ 2.18
TRIO-207ENST00000505971 FAM208AQ9UK61 1670 aaKnown RBP28.64■■■□□ 2.17
TRIO-207ENST00000505971 KAT6BQ8WYB5 2073 aa28.62■■■□□ 2.17
TRIO-207ENST00000505971 PDGFDQ9GZP0 370 aaPredicted RBP28.62■■■□□ 2.17
TRIO-207ENST00000505971 MAP3K19Q56UN5 1328 aa28.62■■■□□ 2.17
TRIO-207ENST00000505971 USP47Q96K76 1375 aa28.61■■■□□ 2.17
TRIO-207ENST00000505971 TMF1P82094 1093 aa28.6■■■□□ 2.17
TRIO-207ENST00000505971 FBLN1P23142 703 aa28.59■■■□□ 2.17
TRIO-207ENST00000505971 HOXC9P31274 260 aa28.59■■■□□ 2.17
TRIO-207ENST00000505971 SLC15A2Q16348 729 aa28.59■■■□□ 2.17
TRIO-207ENST00000505971 ACSBG1Q96GR2 724 aa28.59■■■□□ 2.17
TRIO-207ENST00000505971 FYB1O15117 783 aa28.58■■■□□ 2.17
TRIO-207ENST00000505971 BTAF1O14981 1849 aa28.57■■■□□ 2.16
TRIO-207ENST00000505971 STK32BQ9NY57 414 aa28.56■■■□□ 2.16
TRIO-207ENST00000505971 LTV1Q96GA3 475 aaPredicted RBP28.55■■■□□ 2.16
TRIO-207ENST00000505971 PPP1R1BQ9UD71 204 aaPredicted RBP28.54■■■□□ 2.16
TRIO-207ENST00000505971 RGPD2P0DJD1 1756 aa28.54■■■□□ 2.16
TRIO-207ENST00000505971 PAPPAQ13219 1627 aa28.54■■■□□ 2.16
TRIO-207ENST00000505971 AMPHP49418 695 aa28.53■■■□□ 2.16
TRIO-207ENST00000505971 TIMELESSQ9UNS1 1208 aa28.53■■■□□ 2.16
TRIO-207ENST00000505971 RTL1A6NKG5 1358 aa28.52■■■□□ 2.16
TRIO-207ENST00000505971 PTGER2P43116 358 aa28.52■■■□□ 2.16
TRIO-207ENST00000505971 ZBTB7AO95365 584 aa28.5■■■□□ 2.15
TRIO-207ENST00000505971 CDCA8Q53HL2 280 aa28.5■■■□□ 2.15
TRIO-207ENST00000505971 GGNBP2Q9H3C7 697 aa28.5■■■□□ 2.15
TRIO-207ENST00000505971 DDX54Q8TDD1 881 aaKnown RBP28.49■■■□□ 2.15
TRIO-207ENST00000505971 SHANK3Q9BYB0 1731 aa28.49■■■□□ 2.15
TRIO-207ENST00000505971 RRS1Q15050 365 aaKnown RBP28.48■■■□□ 2.15
TRIO-207ENST00000505971 LRRC4BQ9NT99 713 aa28.48■■■□□ 2.15
TRIO-207ENST00000505971 NBPF6Q5VWK0 638 aa28.46■■■□□ 2.15
TRIO-207ENST00000505971 NBPF4Q96M43 638 aa28.46■■■□□ 2.15
TRIO-207ENST00000505971 SGIP1Q9BQI5 828 aa28.46■■■□□ 2.15
TRIO-207ENST00000505971 MEGF6O75095 1541 aa28.46■■■□□ 2.15
TRIO-207ENST00000505971 ZCRB1Q8TBF4 217 aaKnown RBP28.45■■■□□ 2.14
TRIO-207ENST00000505971 CARD14Q9BXL6 1004 aa28.45■■■□□ 2.14
TRIO-207ENST00000505971 MTFR1LQ9H019 292 aa28.45■■■□□ 2.14
TRIO-207ENST00000505971 ATF5Q9Y2D1 282 aaPredicted RBP28.45■■■□□ 2.14
TRIO-207ENST00000505971 CLSPNQ9HAW4 1339 aa28.44■■■□□ 2.14
TRIO-207ENST00000505971 KIF20BQ96Q89 1820 aa28.44■■■□□ 2.14
TRIO-207ENST00000505971 MYOM1P52179 1685 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms