RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 FMN2Q9NZ56 1722 aa21.62■■□□□ 1.05
LIN54-204ENST00000505397 ANKARQ7Z5J8 1434 aa21.61■■□□□ 1.05
LIN54-204ENST00000505397 BCL2L13Q9BXK5 485 aa21.61■■□□□ 1.05
LIN54-204ENST00000505397 ZRANB1Q9UGI0 708 aa21.61■■□□□ 1.05
LIN54-204ENST00000505397 GSE1Q14687 1217 aa21.6■■□□□ 1.05
LIN54-204ENST00000505397 MVPQ14764 893 aaKnown RBP21.6■■□□□ 1.05
LIN54-204ENST00000505397 NALCNQ8IZF0 1738 aa21.6■■□□□ 1.05
LIN54-204ENST00000505397 CDK12Q9NYV4 1490 aaPredicted RBP21.59■■□□□ 1.05
LIN54-204ENST00000505397 NGDNQ8NEJ9 315 aaKnown RBP21.59■■□□□ 1.05
LIN54-204ENST00000505397 PNNQ9H307 717 aaKnown RBP21.59■■□□□ 1.05
LIN54-204ENST00000505397 FBLN1P23142 703 aa21.59■■□□□ 1.05
LIN54-204ENST00000505397 RWDD1Q9H446 243 aaPredicted RBP21.59■■□□□ 1.05
LIN54-204ENST00000505397 PDZRN3Q9UPQ7 1066 aa21.58■■□□□ 1.05
LIN54-204ENST00000505397 ZKSCAN2Q63HK3 967 aa21.58■■□□□ 1.05
LIN54-204ENST00000505397 TRIM35Q9UPQ4 493 aa21.58■■□□□ 1.05
LIN54-204ENST00000505397 EMILIN1Q9Y6C2 1016 aa21.58■■□□□ 1.05
LIN54-204ENST00000505397 TMPOP42166 694 aaKnown RBP21.57■■□□□ 1.04
LIN54-204ENST00000505397 IL16Q14005 1332 aa21.57■■□□□ 1.04
LIN54-204ENST00000505397 TTC21AQ8NDW8 1320 aa21.56■■□□□ 1.04
LIN54-204ENST00000505397 OVOS2A0A0J9YW53 1432 aa21.55■■□□□ 1.04
LIN54-204ENST00000505397 OVOS2Q6IE36 1432 aa21.55■■□□□ 1.04
LIN54-204ENST00000505397 DZIP1LQ8IYY4 767 aaKnown RBP21.55■■□□□ 1.04
LIN54-204ENST00000505397 TSR2Q969E8 191 aaKnown RBP21.54■■□□□ 1.04
LIN54-204ENST00000505397 RRS1Q15050 365 aaKnown RBP21.53■■□□□ 1.04
LIN54-204ENST00000505397 SSH2Q76I76 1423 aa21.53■■□□□ 1.04
LIN54-204ENST00000505397 EXOSC9Q06265 439 aaKnown RBP21.53■■□□□ 1.04
LIN54-204ENST00000505397 LRRC7Q96NW7 1537 aa21.53■■□□□ 1.04
LIN54-204ENST00000505397 FRAT2O75474 233 aaPredicted RBP21.52■■□□□ 1.04
LIN54-204ENST00000505397 ADGRL3Q9HAR2 1447 aa21.52■■□□□ 1.04
LIN54-204ENST00000505397 FCHSD2O94868 740 aa21.51■■□□□ 1.03
LIN54-204ENST00000505397 TBC1D32Q96NH3 1257 aa21.51■■□□□ 1.03
LIN54-204ENST00000505397 TRIM27P14373 513 aa21.5■■□□□ 1.03
LIN54-204ENST00000505397 BECN1Q14457 450 aa21.5■■□□□ 1.03
LIN54-204ENST00000505397 C14orf37Q86TY3 774 aa21.5■■□□□ 1.03
LIN54-204ENST00000505397 FTSJ3Q8IY81 847 aaKnown RBP21.5■■□□□ 1.03
LIN54-204ENST00000505397 SSH1Q8WYL5 1049 aa21.5■■□□□ 1.03
LIN54-204ENST00000505397 NWD1Q149M9 1564 aa21.5■■□□□ 1.03
LIN54-204ENST00000505397 HDAC1Q13547 482 aaPredicted RBP21.49■■□□□ 1.03
LIN54-204ENST00000505397 SMC4Q9NTJ3 1288 aa21.49■■□□□ 1.03
LIN54-204ENST00000505397 IL27Q8NEV9 243 aa21.49■■□□□ 1.03
LIN54-204ENST00000505397 RBM33Q96EV2 1170 aaKnown RBP21.49■■□□□ 1.03
LIN54-204ENST00000505397 IL13P35225 146 aa21.48■■□□□ 1.03
LIN54-204ENST00000505397 ATF7IPQ6VMQ6 1270 aa21.48■■□□□ 1.03
LIN54-204ENST00000505397 PIK3C2AO00443 1686 aa21.47■■□□□ 1.03
LIN54-204ENST00000505397 USP31Q70CQ4 1352 aa21.47■■□□□ 1.03
LIN54-204ENST00000505397 PRKAR2BP31323 418 aa21.47■■□□□ 1.03
LIN54-204ENST00000505397 DDX19BQ9UMR2 479 aa21.47■■□□□ 1.03
LIN54-204ENST00000505397 RSPH6AQ9H0K4 717 aa21.47■■□□□ 1.03
LIN54-204ENST00000505397 UPF2Q9HAU5 1272 aaKnown RBP21.46■■□□□ 1.03
LIN54-204ENST00000505397 RIPK4P57078 832 aa21.46■■□□□ 1.03
LIN54-204ENST00000505397 HMOX1P09601 288 aa21.45■■□□□ 1.02
LIN54-204ENST00000505397 ANTXR1Q9H6X2 564 aa21.45■■□□□ 1.02
LIN54-204ENST00000505397 PHF8Q9UPP1 1060 aa21.45■■□□□ 1.02
LIN54-204ENST00000505397 SOX12O15370 315 aa21.44■■□□□ 1.02
LIN54-204ENST00000505397 NOB1Q9ULX3 412 aaKnown RBP21.43■■□□□ 1.02
LIN54-204ENST00000505397 SMC5Q8IY18 1101 aa21.42■■□□□ 1.02
LIN54-204ENST00000505397 ALDH1L2Q3SY69 923 aa21.42■■□□□ 1.02
LIN54-204ENST00000505397 ZBTB40Q9NUA8 1239 aa21.42■■□□□ 1.02
LIN54-204ENST00000505397 PEAK1Q9H792 1746 aa21.41■■□□□ 1.02
LIN54-204ENST00000505397 NLRP6P59044 892 aa21.41■■□□□ 1.02
LIN54-204ENST00000505397 KIF16BQ96L93 1317 aa21.41■■□□□ 1.02
LIN54-204ENST00000505397 BRPF1P55201 1214 aaPredicted RBP21.41■■□□□ 1.02
LIN54-204ENST00000505397 ITPRIPQ8IWB1 547 aa21.41■■□□□ 1.02
LIN54-204ENST00000505397 PROSER2Q86WR7 435 aaPredicted RBP21.4■■□□□ 1.02
LIN54-204ENST00000505397 TBC1D2Q9BYX2 928 aa21.4■■□□□ 1.02
LIN54-204ENST00000505397 USP54Q70EL1 1684 aa21.4■■□□□ 1.02
LIN54-204ENST00000505397 ESCO1Q5FWF5 840 aa21.4■■□□□ 1.02
LIN54-204ENST00000505397 TMEM57Q8N5G2 664 aa21.4■■□□□ 1.02
LIN54-204ENST00000505397 EIF4A2Q14240 407 aaKnown RBP21.39■■□□□ 1.01
LIN54-204ENST00000505397 ABTB2Q8N961 1025 aa21.39■■□□□ 1.01
LIN54-204ENST00000505397 IPO8O15397 1037 aaKnown RBP21.38■■□□□ 1.01
LIN54-204ENST00000505397 NFE2L2Q16236 605 aa21.38■■□□□ 1.01
LIN54-204ENST00000505397 ZNF428Q96B54 188 aa21.38■■□□□ 1.01
LIN54-204ENST00000505397 MAP3K19Q56UN5 1328 aa21.38■■□□□ 1.01
LIN54-204ENST00000505397 SBNO1A3KN83 1393 aa21.38■■□□□ 1.01
LIN54-204ENST00000505397 FLT4P35916 1363 aa21.38■■□□□ 1.01
LIN54-204ENST00000505397 MARF1Q9Y4F3 1742 aaKnown RBP21.37■■□□□ 1.01
LIN54-204ENST00000505397 HSP90AB2PQ58FF8 381 aa21.36■■□□□ 1.01
LIN54-204ENST00000505397 PHACTR3Q96KR7 559 aa21.36■■□□□ 1.01
LIN54-204ENST00000505397 AMPHP49418 695 aa21.35■■□□□ 1.01
LIN54-204ENST00000505397 NUTM2GQ5VZR2 741 aa21.35■■□□□ 1.01
LIN54-204ENST00000505397 PSME1Q06323 249 aa21.35■■□□□ 1.01
LIN54-204ENST00000505397 SLKQ9H2G2 1235 aaPredicted RBP21.35■■□□□ 1.01
LIN54-204ENST00000505397 BRPF3Q9ULD4 1205 aa21.35■■□□□ 1.01
LIN54-204ENST00000505397 DLG5Q8TDM6 1919 aa21.35■■□□□ 1.01
LIN54-204ENST00000505397 CALD1Q05682 793 aaKnown RBP21.33■■□□□ 1.01
LIN54-204ENST00000505397 LMOD3Q0VAK6 560 aa21.33■■□□□ 1.01
LIN54-204ENST00000505397 SULT6B1Q6IMI4 303 aa21.33■■□□□ 1.01
LIN54-204ENST00000505397 C22orf23Q9BZE7 217 aa21.33■■□□□ 1.01
LIN54-204ENST00000505397 RGPD1P0DJD0 1748 aa21.33■■□□□ 1.01
LIN54-204ENST00000505397 NUCB1Q02818 461 aa21.32■■□□□ 1
LIN54-204ENST00000505397 HSPA2P54652 639 aa21.31■■□□□ 1
LIN54-204ENST00000505397 KIF24Q5T7B8 1368 aa21.31■■□□□ 1
LIN54-204ENST00000505397 C19orf44Q9H6X5 657 aa21.31■■□□□ 1
LIN54-204ENST00000505397 KIF1AQ12756 1690 aa21.3■■□□□ 1
LIN54-204ENST00000505397 ARHGAP45Q92619 1136 aa21.3■■□□□ 1
LIN54-204ENST00000505397 ARHGEF10O15013 1369 aa21.3■■□□□ 1
LIN54-204ENST00000505397 AEBP1Q8IUX7 1158 aa21.29■■□□□ 1
LIN54-204ENST00000505397 ORAI2Q96SN7 254 aa21.29■■□□□ 1
LIN54-204ENST00000505397 STRCP1A6NGW2 1772 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms