RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 AXIN2Q9Y2T1 843 aa28.24■■■□□ 2.11
UBE2D3-220ENST00000505307 COL18A1P39060 1754 aa28.24■■■□□ 2.11
UBE2D3-220ENST00000505307 EZH2Q15910 746 aaKnown RBP28.23■■■□□ 2.11
UBE2D3-220ENST00000505307 TMC1Q8TDI8 760 aa28.23■■■□□ 2.11
UBE2D3-220ENST00000505307 USP31Q70CQ4 1352 aa28.23■■■□□ 2.11
UBE2D3-220ENST00000505307 MON2Q7Z3U7 1717 aa28.21■■■□□ 2.11
UBE2D3-220ENST00000505307 TERF2IPQ9NYB0 399 aa28.21■■■□□ 2.11
UBE2D3-220ENST00000505307 SOX12O15370 315 aa28.2■■■□□ 2.1
UBE2D3-220ENST00000505307 DDB1Q16531 1140 aa28.2■■■□□ 2.1
UBE2D3-220ENST00000505307 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.2■■■□□ 2.1
UBE2D3-220ENST00000505307 ABCC6O95255 1503 aa28.19■■■□□ 2.1
UBE2D3-220ENST00000505307 CARD10Q9BWT7 1032 aa28.19■■■□□ 2.1
UBE2D3-220ENST00000505307 NFAT5O94916 1531 aa28.18■■■□□ 2.1
UBE2D3-220ENST00000505307 CSB-PGBD3P0DP91 1061 aa28.18■■■□□ 2.1
UBE2D3-220ENST00000505307 SLC12A5Q9H2X9 1139 aa28.18■■■□□ 2.1
UBE2D3-220ENST00000505307 CD163L1Q9NR16 1453 aa28.18■■■□□ 2.1
UBE2D3-220ENST00000505307 OVOS2A0A0G2JMS6 1433 aa28.18■■■□□ 2.1
UBE2D3-220ENST00000505307 OVOS2A0A0J9YW53 1432 aa28.18■■■□□ 2.1
UBE2D3-220ENST00000505307 OVOS2Q6IE36 1432 aa28.18■■■□□ 2.1
UBE2D3-220ENST00000505307 EDC4Q6P2E9 1401 aaKnown RBP28.17■■■□□ 2.1
UBE2D3-220ENST00000505307 NINLQ9Y2I6 1382 aa28.16■■■□□ 2.1
UBE2D3-220ENST00000505307 LRP5O75197 1615 aa28.16■■■□□ 2.1
UBE2D3-220ENST00000505307 R3HDM1Q15032 1099 aaKnown RBP28.15■■■□□ 2.1
UBE2D3-220ENST00000505307 NME9Q86XW9 330 aa28.14■■■□□ 2.1
UBE2D3-220ENST00000505307 TESK2Q96S53 571 aa28.14■■■□□ 2.1
UBE2D3-220ENST00000505307 USP54Q70EL1 1684 aa28.13■■■□□ 2.09
UBE2D3-220ENST00000505307 CCDC7Q96M83 1385 aa28.13■■■□□ 2.09
UBE2D3-220ENST00000505307 ST20-MTHFSA0A0A6YYL1 179 aa28.13■■■□□ 2.09
UBE2D3-220ENST00000505307 LRRC37A3O60309 1634 aa28.11■■■□□ 2.09
UBE2D3-220ENST00000505307 NBPF14Q5TI25 921 aa28.11■■■□□ 2.09
UBE2D3-220ENST00000505307 A0A1W2PP64 1363 aa28.11■■■□□ 2.09
UBE2D3-220ENST00000505307 BCL9O00512 1426 aa28.09■■■□□ 2.09
UBE2D3-220ENST00000505307 PEAK1Q9H792 1746 aa28.09■■■□□ 2.09
UBE2D3-220ENST00000505307 EXOC5O00471 708 aa28.08■■■□□ 2.09
UBE2D3-220ENST00000505307 RGPD5Q99666 1765 aa28.08■■■□□ 2.09
UBE2D3-220ENST00000505307 PLSCR1O15162 318 aa28.07■■■□□ 2.08
UBE2D3-220ENST00000505307 BCL11BQ9C0K0 894 aaPredicted RBP28.07■■■□□ 2.08
UBE2D3-220ENST00000505307 WNK3Q9BYP7 1800 aa28.06■■■□□ 2.08
UBE2D3-220ENST00000505307 MARCH10Q8NA82 808 aaPredicted RBP28.06■■■□□ 2.08
UBE2D3-220ENST00000505307 ERBB3P21860 1342 aa28.06■■■□□ 2.08
UBE2D3-220ENST00000505307 RREB1Q92766 1687 aa28.06■■■□□ 2.08
UBE2D3-220ENST00000505307 NLRP2Q9NX02 1062 aa28.02■■■□□ 2.08
UBE2D3-220ENST00000505307 TMF1P82094 1093 aa28.01■■■□□ 2.07
UBE2D3-220ENST00000505307 TIMELESSQ9UNS1 1208 aa28.01■■■□□ 2.07
UBE2D3-220ENST00000505307 SBF2Q86WG5 1849 aa28■■■□□ 2.07
UBE2D3-220ENST00000505307 NUP188Q5SRE5 1749 aa28■■■□□ 2.07
UBE2D3-220ENST00000505307 RGPD3A6NKT7 1758 aaPredicted RBP27.99■■■□□ 2.07
UBE2D3-220ENST00000505307 RGPD4Q7Z3J3 1758 aa27.99■■■□□ 2.07
UBE2D3-220ENST00000505307 ANKRD24Q8TF21 1146 aa27.99■■■□□ 2.07
UBE2D3-220ENST00000505307 COG3Q96JB2 828 aa27.99■■■□□ 2.07
UBE2D3-220ENST00000505307 TNS2Q63HR2 1409 aa27.99■■■□□ 2.07
UBE2D3-220ENST00000505307 LTN1O94822 1766 aa27.99■■■□□ 2.07
UBE2D3-220ENST00000505307 USP47Q96K76 1375 aa27.99■■■□□ 2.07
UBE2D3-220ENST00000505307 IP6K1Q92551 441 aa27.98■■■□□ 2.07
UBE2D3-220ENST00000505307 ANKRD36BQ8N2N9 1353 aa27.98■■■□□ 2.07
UBE2D3-220ENST00000505307 IL2RBP14784 551 aa27.97■■■□□ 2.07
UBE2D3-220ENST00000505307 CDCA8Q53HL2 280 aa27.97■■■□□ 2.07
UBE2D3-220ENST00000505307 CLSPNQ9HAW4 1339 aa27.95■■■□□ 2.07
UBE2D3-220ENST00000505307 PTF1AQ7RTS3 328 aa27.92■■■□□ 2.06
UBE2D3-220ENST00000505307 MAP3K19Q56UN5 1328 aa27.89■■■□□ 2.05
UBE2D3-220ENST00000505307 AMPHP49418 695 aa27.88■■■□□ 2.05
UBE2D3-220ENST00000505307 PROM2Q8N271 834 aa27.87■■■□□ 2.05
UBE2D3-220ENST00000505307 SPON1Q9HCB6 807 aa27.87■■■□□ 2.05
UBE2D3-220ENST00000505307 HOXC9P31274 260 aa27.86■■■□□ 2.05
UBE2D3-220ENST00000505307 FAM208AQ9UK61 1670 aaKnown RBP27.85■■■□□ 2.05
UBE2D3-220ENST00000505307 FYB1O15117 783 aa27.85■■■□□ 2.05
UBE2D3-220ENST00000505307 TXNRD1Q16881 649 aa27.85■■■□□ 2.05
UBE2D3-220ENST00000505307 LTV1Q96GA3 475 aaPredicted RBP27.85■■■□□ 2.05
UBE2D3-220ENST00000505307 KCNQ2O43526 872 aa27.84■■■□□ 2.05
UBE2D3-220ENST00000505307 RTL1A6NKG5 1358 aa27.84■■■□□ 2.05
UBE2D3-220ENST00000505307 ANO8Q9HCE9 1232 aaPredicted RBP27.83■■■□□ 2.05
UBE2D3-220ENST00000505307 NHSQ6T4R5 1651 aa27.81■■■□□ 2.04
UBE2D3-220ENST00000505307 ACSBG1Q96GR2 724 aa27.81■■■□□ 2.04
UBE2D3-220ENST00000505307 GGNBP2Q9H3C7 697 aa27.81■■■□□ 2.04
UBE2D3-220ENST00000505307 PCGF6Q9BYE7 350 aa27.8■■■□□ 2.04
UBE2D3-220ENST00000505307 STK32BQ9NY57 414 aa27.8■■■□□ 2.04
UBE2D3-220ENST00000505307 FBLN1P23142 703 aa27.78■■■□□ 2.04
UBE2D3-220ENST00000505307 PPP1R1BQ9UD71 204 aaPredicted RBP27.78■■■□□ 2.04
UBE2D3-220ENST00000505307 RRS1Q15050 365 aaKnown RBP27.76■■■□□ 2.03
UBE2D3-220ENST00000505307 SLC15A2Q16348 729 aa27.76■■■□□ 2.03
UBE2D3-220ENST00000505307 DDX54Q8TDD1 881 aaKnown RBP27.76■■■□□ 2.03
UBE2D3-220ENST00000505307 KIF24Q5T7B8 1368 aa27.75■■■□□ 2.03
UBE2D3-220ENST00000505307 SMG6Q86US8 1419 aaKnown RBP27.74■■■□□ 2.03
UBE2D3-220ENST00000505307 CGNL1Q0VF96 1302 aa27.73■■■□□ 2.03
UBE2D3-220ENST00000505307 ZCRB1Q8TBF4 217 aaKnown RBP27.73■■■□□ 2.03
UBE2D3-220ENST00000505307 CASZ1Q86V15 1759 aa27.71■■■□□ 2.03
UBE2D3-220ENST00000505307 INSRP06213 1382 aa27.71■■■□□ 2.03
UBE2D3-220ENST00000505307 NBPF6Q5VWK0 638 aa27.7■■■□□ 2.02
UBE2D3-220ENST00000505307 NBPF4Q96M43 638 aa27.7■■■□□ 2.02
UBE2D3-220ENST00000505307 CARD14Q9BXL6 1004 aa27.7■■■□□ 2.02
UBE2D3-220ENST00000505307 KAT6BQ8WYB5 2073 aa27.7■■■□□ 2.02
UBE2D3-220ENST00000505307 FLT4P35916 1363 aa27.7■■■□□ 2.02
UBE2D3-220ENST00000505307 BTAF1O14981 1849 aa27.69■■■□□ 2.02
UBE2D3-220ENST00000505307 KIF20BQ96Q89 1820 aa27.69■■■□□ 2.02
UBE2D3-220ENST00000505307 RAPGEF4Q8WZA2 1011 aa27.68■■■□□ 2.02
UBE2D3-220ENST00000505307 NSD3Q9BZ95 1437 aa27.67■■■□□ 2.02
UBE2D3-220ENST00000505307 SLC27A3Q5K4L6 730 aa27.67■■■□□ 2.02
UBE2D3-220ENST00000505307 PDGFDQ9GZP0 370 aaPredicted RBP27.67■■■□□ 2.02
UBE2D3-220ENST00000505307 ZBTB7AO95365 584 aa27.66■■■□□ 2.02
UBE2D3-220ENST00000505307 HSP90AB2PQ58FF8 381 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms