RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 ZFYVE9O95405 1425 aa9.6□□□□□ -0.87
ATP2C1-208ENST00000504948 USP54Q70EL1 1684 aa9.6□□□□□ -0.87
ATP2C1-208ENST00000504948 KIF15Q9NS87 1388 aa9.6□□□□□ -0.87
ATP2C1-208ENST00000504948 SMG6Q86US8 1419 aaKnown RBP9.59□□□□□ -0.87
ATP2C1-208ENST00000504948 NUP155O75694 1391 aa9.59□□□□□ -0.87
ATP2C1-208ENST00000504948 PLEKHD1A6NEE1 506 aa9.59□□□□□ -0.87
ATP2C1-208ENST00000504948 NECTIN2Q92692 538 aa9.59□□□□□ -0.87
ATP2C1-208ENST00000504948 CREBRFQ8IUR6 639 aa9.58□□□□□ -0.88
ATP2C1-208ENST00000504948 MARF1Q9Y4F3 1742 aaKnown RBP9.58□□□□□ -0.88
ATP2C1-208ENST00000504948 NEXMIFQ5QGS0 1516 aa9.58□□□□□ -0.88
ATP2C1-208ENST00000504948 FIBPO43427 364 aa9.58□□□□□ -0.88
ATP2C1-208ENST00000504948 COL22A1Q8NFW1 1626 aaPredicted RBP9.57□□□□□ -0.88
ATP2C1-208ENST00000504948 OS9Q13438 667 aaPredicted RBP9.57□□□□□ -0.88
ATP2C1-208ENST00000504948 NRXN1Q9ULB1 1477 aa9.57□□□□□ -0.88
ATP2C1-208ENST00000504948 SHPRHQ149N8 1683 aa9.57□□□□□ -0.88
ATP2C1-208ENST00000504948 DDX54Q8TDD1 881 aaKnown RBP9.57□□□□□ -0.88
ATP2C1-208ENST00000504948 TNNT1P13805 278 aa9.57□□□□□ -0.88
ATP2C1-208ENST00000504948 CCDC173Q0VFZ6 552 aa9.57□□□□□ -0.88
ATP2C1-208ENST00000504948 CGNL1Q0VF96 1302 aa9.57□□□□□ -0.88
ATP2C1-208ENST00000504948 VPS37CA5D8V6 355 aaPredicted RBP9.56□□□□□ -0.88
ATP2C1-208ENST00000504948 ZBTB22O15209 634 aa9.56□□□□□ -0.88
ATP2C1-208ENST00000504948 TMX1Q9H3N1 280 aa9.56□□□□□ -0.88
ATP2C1-208ENST00000504948 TTC12Q9H892 705 aaPredicted RBP9.56□□□□□ -0.88
ATP2C1-208ENST00000504948 USP25Q9UHP3 1055 aa9.56□□□□□ -0.88
ATP2C1-208ENST00000504948 PATL2C9JE40 543 aaKnown RBP9.56□□□□□ -0.88
ATP2C1-208ENST00000504948 APPP05067 770 aa9.56□□□□□ -0.88
ATP2C1-208ENST00000504948 SKOR2Q2VWA4 1001 aaPredicted RBP9.56□□□□□ -0.88
ATP2C1-208ENST00000504948 EFCAB2Q5VUJ9 269 aa9.56□□□□□ -0.88
ATP2C1-208ENST00000504948 RSPH4AQ5TD94 716 aa9.56□□□□□ -0.88
ATP2C1-208ENST00000504948 FAM177A1Q8N128 213 aaPredicted RBP9.56□□□□□ -0.88
ATP2C1-208ENST00000504948 PDCL2Q8N4E4 241 aa9.56□□□□□ -0.88
ATP2C1-208ENST00000504948 FMNL2Q96PY5 1086 aa9.55□□□□□ -0.88
ATP2C1-208ENST00000504948 ANO2Q9NQ90 1003 aa9.55□□□□□ -0.88
ATP2C1-208ENST00000504948 NALCNQ8IZF0 1738 aa9.55□□□□□ -0.88
ATP2C1-208ENST00000504948 ABCA3Q99758 1704 aa9.55□□□□□ -0.88
ATP2C1-208ENST00000504948 HSP90B1P14625 803 aaKnown RBP9.55□□□□□ -0.88
ATP2C1-208ENST00000504948 STAG3Q9UJ98 1225 aa9.55□□□□□ -0.88
ATP2C1-208ENST00000504948 KDM4AO75164 1064 aa9.54□□□□□ -0.88
ATP2C1-208ENST00000504948 C14orf37Q86TY3 774 aa9.54□□□□□ -0.88
ATP2C1-208ENST00000504948 DZIP1LQ8IYY4 767 aaKnown RBP9.54□□□□□ -0.88
ATP2C1-208ENST00000504948 ZKSCAN2Q63HK3 967 aa9.54□□□□□ -0.88
ATP2C1-208ENST00000504948 ST18O60284 1047 aa9.54□□□□□ -0.88
ATP2C1-208ENST00000504948 NEK4P51957 841 aa9.54□□□□□ -0.88
ATP2C1-208ENST00000504948 GAS2L3Q86XJ1 694 aa9.54□□□□□ -0.88
ATP2C1-208ENST00000504948 RAPGEF3O95398 923 aa9.54□□□□□ -0.88
ATP2C1-208ENST00000504948 RTF1Q92541 710 aaKnown RBP9.54□□□□□ -0.88
ATP2C1-208ENST00000504948 ERBB4Q15303 1308 aa9.53□□□□□ -0.88
ATP2C1-208ENST00000504948 ADGRB2O60241 1585 aa9.53□□□□□ -0.88
ATP2C1-208ENST00000504948 NUTM2FA1L443 756 aa9.53□□□□□ -0.88
ATP2C1-208ENST00000504948 CEBPZQ03701 1054 aaKnown RBP9.53□□□□□ -0.88
ATP2C1-208ENST00000504948 SYAP1Q96A49 352 aaPredicted RBP9.53□□□□□ -0.88
ATP2C1-208ENST00000504948 C16orf45Q96MC5 204 aaPredicted RBP9.53□□□□□ -0.88
ATP2C1-208ENST00000504948 TRAK1Q9UPV9 953 aa9.53□□□□□ -0.88
ATP2C1-208ENST00000504948 TOPAZ1Q8N9V7 1692 aa9.53□□□□□ -0.88
ATP2C1-208ENST00000504948 HNRNPMP52272 730 aaKnown RBP eCLIP9.53□□□□□ -0.885e-7■■■■■ 28.1
ATP2C1-208ENST00000504948 SRPK2P78362 688 aaKnown RBP9.53□□□□□ -0.88
ATP2C1-208ENST00000504948 CSPP1Q1MSJ5 1256 aa9.53□□□□□ -0.88
ATP2C1-208ENST00000504948 STK11IPQ8N1F8 1099 aa9.53□□□□□ -0.88
ATP2C1-208ENST00000504948 POLR3GO15318 223 aaPredicted RBP9.53□□□□□ -0.88
ATP2C1-208ENST00000504948 UPF3BQ9BZI7 483 aaKnown RBP9.53□□□□□ -0.88
ATP2C1-208ENST00000504948 MAP7D2Q96T17 732 aa9.52□□□□□ -0.89
ATP2C1-208ENST00000504948 PPFIA3O75145 1194 aa9.52□□□□□ -0.89
ATP2C1-208ENST00000504948 SRRTQ9BXP5 876 aaKnown RBP9.52□□□□□ -0.89
ATP2C1-208ENST00000504948 KIF3AQ9Y496 699 aa9.52□□□□□ -0.89
ATP2C1-208ENST00000504948 HOMER1Q86YM7 354 aa9.51□□□□□ -0.89
ATP2C1-208ENST00000504948 TOMM22Q9NS69 142 aa9.51□□□□□ -0.89
ATP2C1-208ENST00000504948 PRIM1P49642 420 aaKnown RBP9.51□□□□□ -0.89
ATP2C1-208ENST00000504948 AAMPQ13685 434 aa9.51□□□□□ -0.89
ATP2C1-208ENST00000504948 TTLL5Q6EMB2 1281 aa9.51□□□□□ -0.89
ATP2C1-208ENST00000504948 CCDC39Q9UFE4 941 aa9.51□□□□□ -0.89
ATP2C1-208ENST00000504948 PCDHB15Q9Y5E8 787 aa9.51□□□□□ -0.89
ATP2C1-208ENST00000504948 TPD52L1Q16890 204 aaPredicted RBP9.51□□□□□ -0.89
ATP2C1-208ENST00000504948 TCP11L2Q8N4U5 519 aa9.51□□□□□ -0.89
ATP2C1-208ENST00000504948 IPO4Q8TEX9 1081 aaKnown RBP9.51□□□□□ -0.89
ATP2C1-208ENST00000504948 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.5□□□□□ -0.89
ATP2C1-208ENST00000504948 GPATCH11Q8N954 259 aa9.5□□□□□ -0.89
ATP2C1-208ENST00000504948 CAMK4Q16566 473 aa9.5□□□□□ -0.89
ATP2C1-208ENST00000504948 FILIP1Q7Z7B0 1213 aa9.5□□□□□ -0.89
ATP2C1-208ENST00000504948 U2AF2P26368 475 aaKnown RBP eCLIP9.5□□□□□ -0.895e-6■■■□□ 19.2
ATP2C1-208ENST00000504948 GTF2F1P35269 517 aaKnown RBP eCLIP9.5□□□□□ -0.89
ATP2C1-208ENST00000504948 TRIM5Q9C035 493 aa9.5□□□□□ -0.89
ATP2C1-208ENST00000504948 EXOSC9Q06265 439 aaKnown RBP9.5□□□□□ -0.89
ATP2C1-208ENST00000504948 AHDC1Q5TGY3 1603 aaPredicted RBP9.5□□□□□ -0.89
ATP2C1-208ENST00000504948 TRMT1Q9NXH9 659 aaKnown RBP9.5□□□□□ -0.89
ATP2C1-208ENST00000504948 MAP4K4O95819 1239 aaPredicted RBP9.49□□□□□ -0.89
ATP2C1-208ENST00000504948 FERMT3Q86UX7 667 aa9.49□□□□□ -0.89
ATP2C1-208ENST00000504948 SPINK5Q9NQ38 1064 aaPredicted RBP9.49□□□□□ -0.89
ATP2C1-208ENST00000504948 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.49□□□□□ -0.89
ATP2C1-208ENST00000504948 NKTRP30414 1462 aaKnown RBP9.49□□□□□ -0.89
ATP2C1-208ENST00000504948 TSHZ3Q63HK5 1081 aa9.49□□□□□ -0.89
ATP2C1-208ENST00000504948 UHRF1BP1Q6BDS2 1440 aa9.49□□□□□ -0.89
ATP2C1-208ENST00000504948 HMOX1P09601 288 aa9.48□□□□□ -0.89
ATP2C1-208ENST00000504948 PDIA4P13667 645 aaKnown RBP9.48□□□□□ -0.89
ATP2C1-208ENST00000504948 A0A0G2JS52 829 aa9.48□□□□□ -0.89
ATP2C1-208ENST00000504948 BECN2A8MW95 431 aa9.48□□□□□ -0.89
ATP2C1-208ENST00000504948 PPP2R1AP30153 589 aa9.48□□□□□ -0.89
ATP2C1-208ENST00000504948 ZMYM3Q14202 1370 aa9.48□□□□□ -0.89
ATP2C1-208ENST00000504948 IPO8O15397 1037 aaKnown RBP9.48□□□□□ -0.89
ATP2C1-208ENST00000504948 MCCP23508 829 aa9.48□□□□□ -0.89
ATP2C1-208ENST00000504948 THUMPD2Q9BTF0 503 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms