RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 AXIN2Q9Y2T1 843 aa35.58■■■■□ 3.29
PVT1-201ENST00000504719 THRAP3Q9Y2W1 955 aaKnown RBP35.58■■■■□ 3.29
PVT1-201ENST00000504719 CRB1P82279 1406 aa35.57■■■■□ 3.29
PVT1-201ENST00000504719 TMF1P82094 1093 aa35.57■■■■□ 3.28
PVT1-201ENST00000504719 SF3B2Q13435 895 aaKnown RBP35.56■■■■□ 3.28
PVT1-201ENST00000504719 FAM182BQ5T319 152 aa35.55■■■■□ 3.28
PVT1-201ENST00000504719 DEFB132Q7Z7B7 95 aa35.51■■■■□ 3.28
PVT1-201ENST00000504719 PARP4Q9UKK3 1724 aaKnown RBP35.5■■■■□ 3.27
PVT1-201ENST00000504719 ABCC6O95255 1503 aa35.5■■■■□ 3.27
PVT1-201ENST00000504719 WDR17Q8IZU2 1322 aa35.5■■■■□ 3.27
PVT1-201ENST00000504719 RGPD1P0DJD0 1748 aa35.49■■■■□ 3.27
PVT1-201ENST00000504719 TOM1L2Q6ZVM7 507 aa35.48■■■■□ 3.27
PVT1-201ENST00000504719 ANKRD36BQ8N2N9 1353 aa35.48■■■■□ 3.27
PVT1-201ENST00000504719 LTN1O94822 1766 aa35.48■■■■□ 3.27
PVT1-201ENST00000504719 OVOS2A0A0J9YW53 1432 aa35.47■■■■□ 3.27
PVT1-201ENST00000504719 OVOS2Q6IE36 1432 aa35.47■■■■□ 3.27
PVT1-201ENST00000504719 PDE3BQ13370 1112 aa35.46■■■■□ 3.27
PVT1-201ENST00000504719 CDCA8Q53HL2 280 aa35.45■■■■□ 3.27
PVT1-201ENST00000504719 FAM196AQ6ZSG2 479 aa35.45■■■■□ 3.27
PVT1-201ENST00000504719 WNK3Q9BYP7 1800 aa35.43■■■■□ 3.26
PVT1-201ENST00000504719 TNS1Q9HBL0 1735 aaKnown RBP35.41■■■■□ 3.26
PVT1-201ENST00000504719 BAG6P46379 1132 aa35.41■■■■□ 3.26
PVT1-201ENST00000504719 CSB-PGBD3P0DP91 1061 aa35.4■■■■□ 3.26
PVT1-201ENST00000504719 CARD10Q9BWT7 1032 aa35.39■■■■□ 3.26
PVT1-201ENST00000504719 LRRC37A3O60309 1634 aa35.37■■■■□ 3.25
PVT1-201ENST00000504719 COG3Q96JB2 828 aa35.36■■■■□ 3.25
PVT1-201ENST00000504719 TRIM37O94972 964 aa35.35■■■■□ 3.25
PVT1-201ENST00000504719 MYOM1P52179 1685 aa35.35■■■■□ 3.25
PVT1-201ENST00000504719 DISP2A7MBM2 1401 aa35.33■■■■□ 3.25
PVT1-201ENST00000504719 CDCA7Q9BWT1 371 aaPredicted RBP35.33■■■■□ 3.25
PVT1-201ENST00000504719 ERBB3P21860 1342 aa35.32■■■■□ 3.25
PVT1-201ENST00000504719 EN1Q05925 392 aaPredicted RBP35.32■■■■□ 3.24
PVT1-201ENST00000504719 DDB1Q16531 1140 aa35.32■■■■□ 3.24
PVT1-201ENST00000504719 CCDC7Q96M83 1385 aa35.31■■■■□ 3.24
PVT1-201ENST00000504719 PEAK1Q9H792 1746 aa35.3■■■■□ 3.24
PVT1-201ENST00000504719 FYB1O15117 783 aa35.29■■■■□ 3.24
PVT1-201ENST00000504719 C11orf95C9JLR9 678 aaPredicted RBP35.28■■■■□ 3.24
PVT1-201ENST00000504719 KIF20BQ96Q89 1820 aa35.27■■■■□ 3.24
PVT1-201ENST00000504719 ANKRD24Q8TF21 1146 aa35.27■■■■□ 3.24
PVT1-201ENST00000504719 IP6K1Q92551 441 aa35.27■■■■□ 3.24
PVT1-201ENST00000504719 OVOS2A0A0G2JMS6 1433 aa35.26■■■■□ 3.24
PVT1-201ENST00000504719 EIF4G2P78344 907 aaKnown RBP eCLIP35.26■■■■□ 3.243e-6■■■■■ 29.6
PVT1-201ENST00000504719 SBF2Q86WG5 1849 aa35.25■■■■□ 3.23
PVT1-201ENST00000504719 GGNBP2Q9H3C7 697 aa35.25■■■■□ 3.23
PVT1-201ENST00000504719 FBLN1P23142 703 aa35.24■■■■□ 3.23
PVT1-201ENST00000504719 NLRP2Q9NX02 1062 aa35.24■■■■□ 3.23
PVT1-201ENST00000504719 APBA3O96018 575 aa35.23■■■■□ 3.23
PVT1-201ENST00000504719 HSPA5P11021 654 aaKnown RBP35.23■■■■□ 3.23
PVT1-201ENST00000504719 MAP3K19Q56UN5 1328 aa35.23■■■■□ 3.23
PVT1-201ENST00000504719 EZH2Q15910 746 aaKnown RBP35.22■■■■□ 3.23
PVT1-201ENST00000504719 CAMKK2Q96RR4 588 aa35.22■■■■□ 3.23
PVT1-201ENST00000504719 CARD14Q9BXL6 1004 aa35.22■■■■□ 3.23
PVT1-201ENST00000504719 MARCH10Q8NA82 808 aaPredicted RBP35.21■■■■□ 3.23
PVT1-201ENST00000504719 EXOC5O00471 708 aa35.19■■■■□ 3.22
PVT1-201ENST00000504719 FAM208AQ9UK61 1670 aaKnown RBP35.19■■■■□ 3.22
PVT1-201ENST00000504719 NSD3Q9BZ95 1437 aa35.18■■■■□ 3.22
PVT1-201ENST00000504719 HOXC9P31274 260 aa35.18■■■■□ 3.22
PVT1-201ENST00000504719 AMPHP49418 695 aa35.18■■■■□ 3.22
PVT1-201ENST00000504719 PARD3Q8TEW0 1356 aa35.16■■■■□ 3.22
PVT1-201ENST00000504719 BCL9O00512 1426 aa35.15■■■■□ 3.22
PVT1-201ENST00000504719 TNS2Q63HR2 1409 aa35.15■■■■□ 3.22
PVT1-201ENST00000504719 IL2RBP14784 551 aa35.14■■■■□ 3.22
PVT1-201ENST00000504719 LTV1Q96GA3 475 aaPredicted RBP35.14■■■■□ 3.22
PVT1-201ENST00000504719 RREB1Q92766 1687 aa35.14■■■■□ 3.22
PVT1-201ENST00000504719 RTL1A6NKG5 1358 aa35.13■■■■□ 3.21
PVT1-201ENST00000504719 RRS1Q15050 365 aaKnown RBP35.13■■■■□ 3.21
PVT1-201ENST00000504719 POLR3GLQ9BT43 218 aa35.13■■■■□ 3.21
PVT1-201ENST00000504719 RGPD2P0DJD1 1756 aa35.11■■■■□ 3.21
PVT1-201ENST00000504719 BCL11BQ9C0K0 894 aaPredicted RBP35.08■■■■□ 3.21
PVT1-201ENST00000504719 PSDA5PKW4 1024 aaPredicted RBP35.07■■■■□ 3.2
PVT1-201ENST00000504719 NUP188Q5SRE5 1749 aa35.06■■■■□ 3.2
PVT1-201ENST00000504719 RGPD3A6NKT7 1758 aaPredicted RBP35.05■■■■□ 3.2
PVT1-201ENST00000504719 RGPD4Q7Z3J3 1758 aa35.05■■■■□ 3.2
PVT1-201ENST00000504719 PTF1AQ7RTS3 328 aa35.05■■■■□ 3.2
PVT1-201ENST00000504719 CGNL1Q0VF96 1302 aa35.04■■■■□ 3.2
PVT1-201ENST00000504719 PLSCR1O15162 318 aa35.02■■■■□ 3.2
PVT1-201ENST00000504719 KIF24Q5T7B8 1368 aa35.01■■■■□ 3.2
PVT1-201ENST00000504719 R3HDM1Q15032 1099 aaKnown RBP35■■■■□ 3.19
PVT1-201ENST00000504719 INSRP06213 1382 aa35■■■■□ 3.19
PVT1-201ENST00000504719 FLT4P35916 1363 aa35■■■■□ 3.19
PVT1-201ENST00000504719 MAP2P11137 1827 aaKnown RBP34.99■■■■□ 3.19
PVT1-201ENST00000504719 HSP90AB2PQ58FF8 381 aa34.98■■■■□ 3.19
PVT1-201ENST00000504719 NHSQ6T4R5 1651 aa34.98■■■■□ 3.19
PVT1-201ENST00000504719 ANKRD26Q9UPS8 1709 aa34.98■■■■□ 3.19
PVT1-201ENST00000504719 SRCAPQ6ZRS2 3230 aa34.97■■■■□ 3.19
PVT1-201ENST00000504719 NBPF6Q5VWK0 638 aa34.97■■■■□ 3.19
PVT1-201ENST00000504719 NBPF4Q96M43 638 aa34.97■■■■□ 3.19
PVT1-201ENST00000504719 SMG6Q86US8 1419 aaKnown RBP34.97■■■■□ 3.19
PVT1-201ENST00000504719 PANK3Q9H999 370 aa34.96■■■■□ 3.19
PVT1-201ENST00000504719 EMILIN1Q9Y6C2 1016 aa34.96■■■■□ 3.19
PVT1-201ENST00000504719 KAT6BQ8WYB5 2073 aa34.95■■■■□ 3.19
PVT1-201ENST00000504719 LRP5O75197 1615 aa34.93■■■■□ 3.18
PVT1-201ENST00000504719 KCNQ2O43526 872 aa34.93■■■■□ 3.18
PVT1-201ENST00000504719 NBPF14Q5TI25 921 aa34.93■■■■□ 3.18
PVT1-201ENST00000504719 ACSBG1Q96GR2 724 aa34.92■■■■□ 3.18
PVT1-201ENST00000504719 MEGF6O75095 1541 aa34.91■■■■□ 3.18
PVT1-201ENST00000504719 SHANK3Q9BYB0 1731 aa34.91■■■■□ 3.18
PVT1-201ENST00000504719 DDX54Q8TDD1 881 aaKnown RBP34.9■■■■□ 3.18
PVT1-201ENST00000504719 PROM2Q8N271 834 aa34.89■■■■□ 3.18
PVT1-201ENST00000504719 USHBP1Q8N6Y0 703 aa34.89■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms