RNA–Protein interactions for RNA: ENST00000504643.5

MATR3-210, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 2,560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-210ENST00000504643 DCAF8L1A6NGE4 600 aa11.04□□□□□ -0.64
MATR3-210ENST00000504643 CSB-PGBD3P0DP91 1061 aa11.04□□□□□ -0.64
MATR3-210ENST00000504643 HDGFL2Q7Z4V5 671 aaPredicted RBP11.04□□□□□ -0.64
MATR3-210ENST00000504643 BCL9O00512 1426 aa11.04□□□□□ -0.64
MATR3-210ENST00000504643 KTN1Q86UP2 1357 aaKnown RBP11.03□□□□□ -0.64
MATR3-210ENST00000504643 CCDC7Q96M83 1385 aa11.03□□□□□ -0.64
MATR3-210ENST00000504643 EXOC5O00471 708 aa11.03□□□□□ -0.64
MATR3-210ENST00000504643 CPSF1Q10570 1443 aaKnown RBP11.03□□□□□ -0.64
MATR3-210ENST00000504643 CARD11Q9BXL7 1154 aa11.03□□□□□ -0.64
MATR3-210ENST00000504643 TNS1Q9HBL0 1735 aaKnown RBP11.03□□□□□ -0.64
MATR3-210ENST00000504643 TERF2IPQ9NYB0 399 aa11.02□□□□□ -0.65
MATR3-210ENST00000504643 SPON1Q9HCB6 807 aa11.02□□□□□ -0.65
MATR3-210ENST00000504643 PARP4Q9UKK3 1724 aaKnown RBP11.02□□□□□ -0.65
MATR3-210ENST00000504643 ABCC6O95255 1503 aa11.02□□□□□ -0.65
MATR3-210ENST00000504643 USP31Q70CQ4 1352 aa11.01□□□□□ -0.65
MATR3-210ENST00000504643 AXIN2Q9Y2T1 843 aa11.01□□□□□ -0.65
MATR3-210ENST00000504643 KCNQ2O43526 872 aa11□□□□□ -0.65
MATR3-210ENST00000504643 PPP1R1BQ9UD71 204 aaPredicted RBP10.99□□□□□ -0.65
MATR3-210ENST00000504643 TONSLQ96HA7 1378 aa10.99□□□□□ -0.65
MATR3-210ENST00000504643 NINLQ9Y2I6 1382 aa10.99□□□□□ -0.65
MATR3-210ENST00000504643 TMC1Q8TDI8 760 aa10.98□□□□□ -0.65
MATR3-210ENST00000504643 MARCH10Q8NA82 808 aaPredicted RBP10.98□□□□□ -0.65
MATR3-210ENST00000504643 PIK3C2AO00443 1686 aa10.97□□□□□ -0.65
MATR3-210ENST00000504643 HMGB2P26583 209 aaKnown RBP10.97□□□□□ -0.65
MATR3-210ENST00000504643 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.97□□□□□ -0.654e-7■■■□□ 14.8
MATR3-210ENST00000504643 COL18A1P39060 1754 aa10.97□□□□□ -0.65
MATR3-210ENST00000504643 EDC4Q6P2E9 1401 aaKnown RBP10.96□□□□□ -0.65
MATR3-210ENST00000504643 RREB1Q92766 1687 aa10.96□□□□□ -0.65
MATR3-210ENST00000504643 SOX12O15370 315 aa10.96□□□□□ -0.65
MATR3-210ENST00000504643 STK32BQ9NY57 414 aa10.96□□□□□ -0.65
MATR3-210ENST00000504643 SRCAPQ6ZRS2 3230 aa10.96□□□□□ -0.65
MATR3-210ENST00000504643 RGPD3A6NKT7 1758 aaPredicted RBP10.96□□□□□ -0.66
MATR3-210ENST00000504643 AKAP12Q02952 1782 aa10.96□□□□□ -0.66
MATR3-210ENST00000504643 RGPD4Q7Z3J3 1758 aa10.96□□□□□ -0.66
MATR3-210ENST00000504643 IL2RBP14784 551 aa10.96□□□□□ -0.66
MATR3-210ENST00000504643 NLRP2Q9NX02 1062 aa10.96□□□□□ -0.66
MATR3-210ENST00000504643 ERBB3P21860 1342 aa10.95□□□□□ -0.66
MATR3-210ENST00000504643 SLC12A5Q9H2X9 1139 aa10.95□□□□□ -0.66
MATR3-210ENST00000504643 NFAT5O94916 1531 aa10.95□□□□□ -0.66
MATR3-210ENST00000504643 TXNRD1Q16881 649 aa10.94□□□□□ -0.66
MATR3-210ENST00000504643 PEAK1Q9H792 1746 aa10.94□□□□□ -0.66
MATR3-210ENST00000504643 NME9Q86XW9 330 aa10.94□□□□□ -0.66
MATR3-210ENST00000504643 LRRC37A3O60309 1634 aa10.94□□□□□ -0.66
MATR3-210ENST00000504643 CDCA8Q53HL2 280 aa10.93□□□□□ -0.66
MATR3-210ENST00000504643 ANKRD24Q8TF21 1146 aa10.93□□□□□ -0.66
MATR3-210ENST00000504643 IP6K1Q92551 441 aa10.93□□□□□ -0.66
MATR3-210ENST00000504643 NUP188Q5SRE5 1749 aa10.93□□□□□ -0.66
MATR3-210ENST00000504643 TNS2Q63HR2 1409 aa10.93□□□□□ -0.66
MATR3-210ENST00000504643 COG3Q96JB2 828 aa10.93□□□□□ -0.66
MATR3-210ENST00000504643 SLC15A2Q16348 729 aa10.92□□□□□ -0.66
MATR3-210ENST00000504643 PROM2Q8N271 834 aa10.92□□□□□ -0.66
MATR3-210ENST00000504643 MON2Q7Z3U7 1717 aa10.91□□□□□ -0.66
MATR3-210ENST00000504643 USP54Q70EL1 1684 aa10.91□□□□□ -0.66
MATR3-210ENST00000504643 CD163L1Q9NR16 1453 aa10.91□□□□□ -0.66
MATR3-210ENST00000504643 TMF1P82094 1093 aa10.9□□□□□ -0.66
MATR3-210ENST00000504643 MTFR1LQ9H019 292 aa10.9□□□□□ -0.66
MATR3-210ENST00000504643 A0A1W2PP64 1363 aa10.9□□□□□ -0.66
MATR3-210ENST00000504643 ST20-MTHFSA0A0A6YYL1 179 aa10.9□□□□□ -0.66
MATR3-210ENST00000504643 SLC27A3Q5K4L6 730 aa10.9□□□□□ -0.66
MATR3-210ENST00000504643 SBF2Q86WG5 1849 aa10.9□□□□□ -0.67
MATR3-210ENST00000504643 YY1P25490 414 aa10.89□□□□□ -0.67
MATR3-210ENST00000504643 AMPHP49418 695 aa10.89□□□□□ -0.67
MATR3-210ENST00000504643 TESK2Q96S53 571 aa10.89□□□□□ -0.67
MATR3-210ENST00000504643 TIMELESSQ9UNS1 1208 aa10.89□□□□□ -0.67
MATR3-210ENST00000504643 CGNL1Q0VF96 1302 aa10.89□□□□□ -0.67
MATR3-210ENST00000504643 ANO8Q9HCE9 1232 aaPredicted RBP10.89□□□□□ -0.67
MATR3-210ENST00000504643 WNK3Q9BYP7 1800 aa10.89□□□□□ -0.67
MATR3-210ENST00000504643 SLC16A10Q8TF71 515 aa10.88□□□□□ -0.67
MATR3-210ENST00000504643 PTF1AQ7RTS3 328 aa10.88□□□□□ -0.67
MATR3-210ENST00000504643 TRIM26Q12899 539 aaPredicted RBP10.87□□□□□ -0.67
MATR3-210ENST00000504643 ANKRD36BQ8N2N9 1353 aa10.87□□□□□ -0.67
MATR3-210ENST00000504643 ACSBG1Q96GR2 724 aa10.87□□□□□ -0.67
MATR3-210ENST00000504643 RTL1A6NKG5 1358 aa10.87□□□□□ -0.67
MATR3-210ENST00000504643 HOXC9P31274 260 aa10.86□□□□□ -0.67
MATR3-210ENST00000504643 ZBTB7AO95365 584 aa10.86□□□□□ -0.67
MATR3-210ENST00000504643 ZCRB1Q8TBF4 217 aaKnown RBP10.86□□□□□ -0.67
MATR3-210ENST00000504643 DDX54Q8TDD1 881 aaKnown RBP10.86□□□□□ -0.67
MATR3-210ENST00000504643 RGPD5Q99666 1765 aa10.86□□□□□ -0.67
MATR3-210ENST00000504643 KIF24Q5T7B8 1368 aa10.85□□□□□ -0.67
MATR3-210ENST00000504643 MAP3K19Q56UN5 1328 aa10.85□□□□□ -0.67
MATR3-210ENST00000504643 PTGER2P43116 358 aa10.85□□□□□ -0.67
MATR3-210ENST00000504643 ATF5Q9Y2D1 282 aaPredicted RBP10.85□□□□□ -0.67
MATR3-210ENST00000504643 NHSQ6T4R5 1651 aa10.85□□□□□ -0.67
MATR3-210ENST00000504643 SMG6Q86US8 1419 aaKnown RBP10.85□□□□□ -0.67
MATR3-210ENST00000504643 LTV1Q96GA3 475 aaPredicted RBP10.84□□□□□ -0.67
MATR3-210ENST00000504643 FAM208AQ9UK61 1670 aaKnown RBP10.84□□□□□ -0.67
MATR3-210ENST00000504643 RAPGEF4Q8WZA2 1011 aa10.84□□□□□ -0.67
MATR3-210ENST00000504643 FYB1O15117 783 aa10.83□□□□□ -0.68
MATR3-210ENST00000504643 POLD1P28340 1107 aa10.83□□□□□ -0.68
MATR3-210ENST00000504643 ARXQ96QS3 562 aa10.83□□□□□ -0.68
MATR3-210ENST00000504643 SYT17Q9BSW7 474 aa10.83□□□□□ -0.68
MATR3-210ENST00000504643 LTN1O94822 1766 aa10.83□□□□□ -0.68
MATR3-210ENST00000504643 CASZ1Q86V15 1759 aa10.83□□□□□ -0.68
MATR3-210ENST00000504643 MAP3K5Q99683 1374 aa10.83□□□□□ -0.68
MATR3-210ENST00000504643 CLSPNQ9HAW4 1339 aa10.82□□□□□ -0.68
MATR3-210ENST00000504643 TATP17735 454 aaPredicted RBP10.82□□□□□ -0.68
MATR3-210ENST00000504643 SGIP1Q9BQI5 828 aa10.82□□□□□ -0.68
MATR3-210ENST00000504643 USP47Q96K76 1375 aa10.82□□□□□ -0.68
MATR3-210ENST00000504643 PRIM1P49642 420 aaKnown RBP10.81□□□□□ -0.68
MATR3-210ENST00000504643 AKT1S1Q96B36 256 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms