RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 NGEFQ8N5V2 710 aa9.31□□□□□ -0.92
NEDD9-208ENST00000504387 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.31□□□□□ -0.92
NEDD9-208ENST00000504387 DYNC1I1O14576 645 aa9.31□□□□□ -0.92
NEDD9-208ENST00000504387 ST18O60284 1047 aa9.31□□□□□ -0.92
NEDD9-208ENST00000504387 ZNF500O60304 480 aaPredicted RBP9.31□□□□□ -0.92
NEDD9-208ENST00000504387 HCLS1P14317 486 aaPredicted RBP9.31□□□□□ -0.92
NEDD9-208ENST00000504387 U2AF2P26368 475 aaKnown RBP eCLIP9.31□□□□□ -0.924e-7■■□□□ 14.3
NEDD9-208ENST00000504387 PLEKHM2Q8IWE5 1019 aa9.31□□□□□ -0.92
NEDD9-208ENST00000504387 RILPL2Q969X0 211 aa9.31□□□□□ -0.92
NEDD9-208ENST00000504387 VIRMAQ69YN4 1812 aaKnown RBP9.31□□□□□ -0.92
NEDD9-208ENST00000504387 SDSP20132 328 aa9.3□□□□□ -0.92
NEDD9-208ENST00000504387 PTMSP20962 102 aa9.3□□□□□ -0.92
NEDD9-208ENST00000504387 RABEP1Q15276 862 aa9.3□□□□□ -0.92
NEDD9-208ENST00000504387 PHACTR3Q96KR7 559 aa9.3□□□□□ -0.92
NEDD9-208ENST00000504387 MAP7D2Q96T17 732 aa9.3□□□□□ -0.92
NEDD9-208ENST00000504387 CROCC2H7BZ55 1655 aa9.3□□□□□ -0.92
NEDD9-208ENST00000504387 SYNMO15061 1565 aa9.3□□□□□ -0.92
NEDD9-208ENST00000504387 PPIP5K1Q6PFW1 1433 aa9.3□□□□□ -0.92
NEDD9-208ENST00000504387 CSPP1Q1MSJ5 1256 aa9.3□□□□□ -0.92
NEDD9-208ENST00000504387 DDX54Q8TDD1 881 aaKnown RBP9.3□□□□□ -0.92
NEDD9-208ENST00000504387 USP26Q9BXU7 913 aa9.3□□□□□ -0.92
NEDD9-208ENST00000504387 TSPY26PQ9H489 355 aa9.3□□□□□ -0.92
NEDD9-208ENST00000504387 CABP1Q9NZU7 370 aa9.3□□□□□ -0.92
NEDD9-208ENST00000504387 NCOA3Q9Y6Q9 1424 aa9.3□□□□□ -0.92
NEDD9-208ENST00000504387 DIAPH1O60610 1272 aaKnown RBP9.29□□□□□ -0.92
NEDD9-208ENST00000504387 MAP4K4O95819 1239 aaPredicted RBP9.29□□□□□ -0.92
NEDD9-208ENST00000504387 ZNF710Q8N1W2 664 aa9.29□□□□□ -0.92
NEDD9-208ENST00000504387 BBXQ8WY36 941 aaPredicted RBP9.29□□□□□ -0.92
NEDD9-208ENST00000504387 PLCH2O75038 1416 aa9.29□□□□□ -0.92
NEDD9-208ENST00000504387 TRIM6-TRIM34B2RNG4 842 aa9.29□□□□□ -0.92
NEDD9-208ENST00000504387 CCDC94Q9BW85 323 aaPredicted RBP9.29□□□□□ -0.92
NEDD9-208ENST00000504387 ZSCAN20P17040 1043 aaPredicted RBP9.29□□□□□ -0.92
NEDD9-208ENST00000504387 NOLC1Q14978 699 aaKnown RBP eCLIP9.29□□□□□ -0.92
NEDD9-208ENST00000504387 NECTIN2Q92692 538 aa9.29□□□□□ -0.92
NEDD9-208ENST00000504387 ANO2Q9NQ90 1003 aa9.29□□□□□ -0.92
NEDD9-208ENST00000504387 ERVK-7P63135 1459 aa9.29□□□□□ -0.92
NEDD9-208ENST00000504387 DUOX2Q9NRD8 1548 aa9.28□□□□□ -0.92
NEDD9-208ENST00000504387 NAA30Q147X3 362 aaPredicted RBP9.28□□□□□ -0.92
NEDD9-208ENST00000504387 HDGFL2Q7Z4V5 671 aaPredicted RBP9.28□□□□□ -0.92
NEDD9-208ENST00000504387 WAPLQ7Z5K2 1190 aa9.28□□□□□ -0.92
NEDD9-208ENST00000504387 SMAP1Q8IYB5 467 aaPredicted RBP9.28□□□□□ -0.92
NEDD9-208ENST00000504387 C8orf58Q8NAV2 365 aa9.28□□□□□ -0.92
NEDD9-208ENST00000504387 PDLIM2Q96JY6 352 aa9.28□□□□□ -0.92
NEDD9-208ENST00000504387 CGNQ9P2M7 1197 aaKnown RBP9.28□□□□□ -0.92
NEDD9-208ENST00000504387 ZCCHC11Q5TAX3 1644 aaKnown RBP9.28□□□□□ -0.92
NEDD9-208ENST00000504387 CDC42BPBQ9Y5S2 1711 aa9.28□□□□□ -0.92
NEDD9-208ENST00000504387 NPHP1O15259 732 aa9.28□□□□□ -0.92
NEDD9-208ENST00000504387 FIBPO43427 364 aa9.28□□□□□ -0.92
NEDD9-208ENST00000504387 ADCY5O95622 1261 aa9.28□□□□□ -0.92
NEDD9-208ENST00000504387 ZNF428Q96B54 188 aa9.28□□□□□ -0.92
NEDD9-208ENST00000504387 GCC1Q96CN9 775 aa9.28□□□□□ -0.92
NEDD9-208ENST00000504387 TMX3Q96JJ7 454 aa9.28□□□□□ -0.92
NEDD9-208ENST00000504387 TRERF1Q96PN7 1200 aa9.28□□□□□ -0.92
NEDD9-208ENST00000504387 VGFO15240 615 aaPredicted RBP9.27□□□□□ -0.92
NEDD9-208ENST00000504387 ZNF771Q7L3S4 317 aaPredicted RBP9.27□□□□□ -0.92
NEDD9-208ENST00000504387 MIS18AQ9NYP9 233 aa9.27□□□□□ -0.92
NEDD9-208ENST00000504387 INTS3Q68E01 1043 aaKnown RBP9.27□□□□□ -0.93
NEDD9-208ENST00000504387 GIMAP6Q6P9H5 292 aa9.27□□□□□ -0.93
NEDD9-208ENST00000504387 ZNF592Q92610 1267 aa9.27□□□□□ -0.93
NEDD9-208ENST00000504387 TERF2IPQ9NYB0 399 aa9.27□□□□□ -0.93
NEDD9-208ENST00000504387 EXOC6BQ9Y2D4 811 aa9.27□□□□□ -0.93
NEDD9-208ENST00000504387 UHRF1BP1LA0JNW5 1464 aa9.27□□□□□ -0.93
NEDD9-208ENST00000504387 TWISTNBQ3B726 338 aaPredicted RBP9.27□□□□□ -0.93
NEDD9-208ENST00000504387 FBXO31Q5XUX0 539 aaPredicted RBP9.27□□□□□ -0.93
NEDD9-208ENST00000504387 PLCD3Q8N3E9 789 aa9.27□□□□□ -0.93
NEDD9-208ENST00000504387 ZBTB9Q96C00 473 aa9.27□□□□□ -0.93
NEDD9-208ENST00000504387 PALD1Q9ULE6 856 aa9.27□□□□□ -0.93
NEDD9-208ENST00000504387 ATP10AO60312 1499 aa9.26□□□□□ -0.93
NEDD9-208ENST00000504387 VAMP4O75379 141 aa9.26□□□□□ -0.93
NEDD9-208ENST00000504387 IDI1Q13907 227 aa9.26□□□□□ -0.93
NEDD9-208ENST00000504387 RRS1Q15050 365 aaKnown RBP9.26□□□□□ -0.93
NEDD9-208ENST00000504387 TTC22Q5TAA0 569 aa9.26□□□□□ -0.93
NEDD9-208ENST00000504387 CASC1Q6TDU7 716 aa9.26□□□□□ -0.93
NEDD9-208ENST00000504387 USP48Q86UV5 1035 aa9.26□□□□□ -0.93
NEDD9-208ENST00000504387 PLEKHF1Q96S99 279 aa9.26□□□□□ -0.93
NEDD9-208ENST00000504387 BCL2L12Q9HB09 334 aa9.26□□□□□ -0.93
NEDD9-208ENST00000504387 ZRANB1Q9UGI0 708 aa9.26□□□□□ -0.93
NEDD9-208ENST00000504387 CD109Q6YHK3 1445 aa9.26□□□□□ -0.93
NEDD9-208ENST00000504387 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.26□□□□□ -0.935e-7■■■□□ 17.2
NEDD9-208ENST00000504387 KIF3AQ9Y496 699 aa9.26□□□□□ -0.93
NEDD9-208ENST00000504387 V9GYY5 206 aaPredicted RBP9.26□□□□□ -0.93
NEDD9-208ENST00000504387 ARHGEF5Q12774 1597 aa9.26□□□□□ -0.93
NEDD9-208ENST00000504387 F6X3S4 739 aa9.26□□□□□ -0.93
NEDD9-208ENST00000504387 PDCL2Q8N4E4 241 aa9.26□□□□□ -0.93
NEDD9-208ENST00000504387 CNPY2Q9Y2B0 182 aa9.26□□□□□ -0.93
NEDD9-208ENST00000504387 MYO5CQ9NQX4 1742 aa9.25□□□□□ -0.93
NEDD9-208ENST00000504387 CPA1P15085 419 aa9.25□□□□□ -0.93
NEDD9-208ENST00000504387 DMTNQ08495 405 aa9.25□□□□□ -0.93
NEDD9-208ENST00000504387 MYRIPQ8NFW9 859 aa9.25□□□□□ -0.93
NEDD9-208ENST00000504387 C14orf93Q9H972 538 aaKnown RBP9.25□□□□□ -0.93
NEDD9-208ENST00000504387 MBIPQ9NS73 344 aa9.25□□□□□ -0.93
NEDD9-208ENST00000504387 FANCAO15360 1455 aa9.25□□□□□ -0.93
NEDD9-208ENST00000504387 NPC1L1Q9UHC9 1359 aa9.25□□□□□ -0.93
NEDD9-208ENST00000504387 NCKAP5LQ9HCH0 1330 aa9.25□□□□□ -0.93
NEDD9-208ENST00000504387 ADGRL1O94910 1474 aa9.25□□□□□ -0.93
NEDD9-208ENST00000504387 DRC7Q8IY82 874 aa9.25□□□□□ -0.93
NEDD9-208ENST00000504387 MRPL50Q8N5N7 158 aaKnown RBP9.25□□□□□ -0.93
NEDD9-208ENST00000504387 MEIS3Q99687 375 aa9.25□□□□□ -0.93
NEDD9-208ENST00000504387 CDK19Q9BWU1 502 aa9.25□□□□□ -0.93
NEDD9-208ENST00000504387 PYCARDQ9ULZ3 195 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms