RNA–Protein interactions for RNA: ENST00000503341.1

ARHGEF28-205, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 2

Gene ARHGEF28, Length 1,926 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-205ENST00000503341 FLT4P35916 1363 aa24.73■■□□□ 1.55
ARHGEF28-205ENST00000503341 NUTM2GQ5VZR2 741 aa24.73■■□□□ 1.55
ARHGEF28-205ENST00000503341 TSR2Q969E8 191 aaKnown RBP24.73■■□□□ 1.55
ARHGEF28-205ENST00000503341 RGPD1P0DJD0 1748 aa24.72■■□□□ 1.55
ARHGEF28-205ENST00000503341 CT47B1P0C2W7 299 aaPredicted RBP24.71■■□□□ 1.55
ARHGEF28-205ENST00000503341 PSME1Q06323 249 aa24.71■■□□□ 1.55
ARHGEF28-205ENST00000503341 SULT6B1Q6IMI4 303 aa24.71■■□□□ 1.55
ARHGEF28-205ENST00000503341 AEBP1Q8IUX7 1158 aa24.7■■□□□ 1.54
ARHGEF28-205ENST00000503341 C19orf44Q9H6X5 657 aa24.7■■□□□ 1.54
ARHGEF28-205ENST00000503341 AMPHP49418 695 aa24.69■■□□□ 1.54
ARHGEF28-205ENST00000503341 HSPA2P54652 639 aa24.69■■□□□ 1.54
ARHGEF28-205ENST00000503341 ORAI2Q96SN7 254 aa24.69■■□□□ 1.54
ARHGEF28-205ENST00000503341 KDM4FA0A1W2PPD8 638 aa24.69■■□□□ 1.54
ARHGEF28-205ENST00000503341 EXOSC9Q06265 439 aaKnown RBP24.69■■□□□ 1.54
ARHGEF28-205ENST00000503341 KIF24Q5T7B8 1368 aa24.68■■□□□ 1.54
ARHGEF28-205ENST00000503341 PDE3AQ14432 1141 aa24.67■■□□□ 1.54
ARHGEF28-205ENST00000503341 ARHGEF10O15013 1369 aa24.67■■□□□ 1.54
ARHGEF28-205ENST00000503341 STRCP1A6NGW2 1772 aa24.66■■□□□ 1.54
ARHGEF28-205ENST00000503341 CALD1Q05682 793 aaKnown RBP24.66■■□□□ 1.54
ARHGEF28-205ENST00000503341 LMOD3Q0VAK6 560 aa24.65■■□□□ 1.54
ARHGEF28-205ENST00000503341 DLG5Q8TDM6 1919 aa24.65■■□□□ 1.54
ARHGEF28-205ENST00000503341 C1orf167Q5SNV9 1468 aa24.64■■□□□ 1.53
ARHGEF28-205ENST00000503341 NCOA3Q9Y6Q9 1424 aa24.64■■□□□ 1.53
ARHGEF28-205ENST00000503341 TMEM94Q12767 1356 aa24.63■■□□□ 1.53
ARHGEF28-205ENST00000503341 FOXO3O43524 673 aa24.63■■□□□ 1.53
ARHGEF28-205ENST00000503341 HOXC9P31274 260 aa24.63■■□□□ 1.53
ARHGEF28-205ENST00000503341 CANXP27824 592 aaKnown RBP24.63■■□□□ 1.53
ARHGEF28-205ENST00000503341 THUMPD2Q9BTF0 503 aaKnown RBP24.63■■□□□ 1.53
ARHGEF28-205ENST00000503341 FRAT1Q92837 279 aaPredicted RBP24.62■■□□□ 1.53
ARHGEF28-205ENST00000503341 BCL2L13Q9BXK5 485 aa24.61■■□□□ 1.53
ARHGEF28-205ENST00000503341 IGSF1Q8N6C5 1336 aa24.61■■□□□ 1.53
ARHGEF28-205ENST00000503341 EYA1Q99502 592 aa24.61■■□□□ 1.53
ARHGEF28-205ENST00000503341 IFT57Q9NWB7 429 aa24.61■■□□□ 1.53
ARHGEF28-205ENST00000503341 KDRP35968 1356 aa24.6■■□□□ 1.53
ARHGEF28-205ENST00000503341 LMTK3Q96Q04 1460 aa24.6■■□□□ 1.53
ARHGEF28-205ENST00000503341 ZNF853P0CG23 659 aa24.6■■□□□ 1.53
ARHGEF28-205ENST00000503341 KIF1AQ12756 1690 aa24.59■■□□□ 1.53
ARHGEF28-205ENST00000503341 GNAI1P63096 354 aa24.59■■□□□ 1.53
ARHGEF28-205ENST00000503341 NFAT5O94916 1531 aa24.59■■□□□ 1.53
ARHGEF28-205ENST00000503341 LAS1LQ9Y4W2 734 aaKnown RBP24.59■■□□□ 1.53
ARHGEF28-205ENST00000503341 RTL1A6NKG5 1358 aa24.59■■□□□ 1.53
ARHGEF28-205ENST00000503341 DCCP43146 1447 aa24.58■■□□□ 1.53
ARHGEF28-205ENST00000503341 PANK1Q8TE04 598 aa24.58■■□□□ 1.53
ARHGEF28-205ENST00000503341 FAM83GA6ND36 823 aa24.57■■□□□ 1.52
ARHGEF28-205ENST00000503341 ATF3P18847 181 aa24.57■■□□□ 1.52
ARHGEF28-205ENST00000503341 XPCQ01831 940 aaPredicted RBP24.57■■□□□ 1.52
ARHGEF28-205ENST00000503341 KCNH5Q8NCM2 988 aa24.57■■□□□ 1.52
ARHGEF28-205ENST00000503341 MST1RQ04912 1400 aa24.57■■□□□ 1.52
ARHGEF28-205ENST00000503341 KRT28Q7Z3Y7 464 aa24.56■■□□□ 1.52
ARHGEF28-205ENST00000503341 CFAP44Q96MT7 982 aa24.56■■□□□ 1.52
ARHGEF28-205ENST00000503341 TRPM3Q9HCF6 1732 aaPredicted RBP24.56■■□□□ 1.52
ARHGEF28-205ENST00000503341 LTN1O94822 1766 aa24.55■■□□□ 1.52
ARHGEF28-205ENST00000503341 SSH1Q8WYL5 1049 aa24.55■■□□□ 1.52
ARHGEF28-205ENST00000503341 DCTN1Q14203 1278 aa24.55■■□□□ 1.52
ARHGEF28-205ENST00000503341 SMC4Q9NTJ3 1288 aa24.55■■□□□ 1.52
ARHGEF28-205ENST00000503341 IP6K1Q92551 441 aa24.54■■□□□ 1.52
ARHGEF28-205ENST00000503341 MBIPQ9NS73 344 aa24.54■■□□□ 1.52
ARHGEF28-205ENST00000503341 COG6Q9Y2V7 657 aa24.54■■□□□ 1.52
ARHGEF28-205ENST00000503341 STRCQ7RTU9 1775 aa24.54■■□□□ 1.52
ARHGEF28-205ENST00000503341 RBM19Q9Y4C8 960 aaKnown RBP24.53■■□□□ 1.52
ARHGEF28-205ENST00000503341 KDM2BQ8NHM5 1336 aa24.53■■□□□ 1.52
ARHGEF28-205ENST00000503341 ZKSCAN2Q63HK3 967 aa24.53■■□□□ 1.52
ARHGEF28-205ENST00000503341 TNNQ9UQP3 1299 aa24.53■■□□□ 1.52
ARHGEF28-205ENST00000503341 SLIT3O75094 1523 aa24.52■■□□□ 1.52
ARHGEF28-205ENST00000503341 RLBP1P12271 317 aa24.52■■□□□ 1.52
ARHGEF28-205ENST00000503341 ZNF428Q96B54 188 aa24.52■■□□□ 1.52
ARHGEF28-205ENST00000503341 MTHFSDQ2M296 383 aaKnown RBP24.51■■□□□ 1.51
ARHGEF28-205ENST00000503341 ALDH1L2Q3SY69 923 aa24.51■■□□□ 1.51
ARHGEF28-205ENST00000503341 CADPS2Q86UW7 1296 aa24.51■■□□□ 1.51
ARHGEF28-205ENST00000503341 PHRF1Q9P1Y6 1649 aaKnown RBP24.5■■□□□ 1.51
ARHGEF28-205ENST00000503341 GCP02774 474 aa24.5■■□□□ 1.51
ARHGEF28-205ENST00000503341 VAMP4O75379 141 aa24.49■■□□□ 1.51
ARHGEF28-205ENST00000503341 CENPQQ7L2Z9 268 aaPredicted RBP24.49■■□□□ 1.51
ARHGEF28-205ENST00000503341 LTV1Q96GA3 475 aaPredicted RBP24.49■■□□□ 1.51
ARHGEF28-205ENST00000503341 USP19O94966 1318 aa24.49■■□□□ 1.51
ARHGEF28-205ENST00000503341 MS4A1P11836 297 aa24.47■■□□□ 1.51
ARHGEF28-205ENST00000503341 LMOD2Q6P5Q4 547 aa24.47■■□□□ 1.51
ARHGEF28-205ENST00000503341 MCM10Q7L590 875 aa24.47■■□□□ 1.51
ARHGEF28-205ENST00000503341 CLUAP1Q96AJ1 413 aa24.47■■□□□ 1.51
ARHGEF28-205ENST00000503341 MSH6P52701 1360 aa24.47■■□□□ 1.51
ARHGEF28-205ENST00000503341 BRPF1P55201 1214 aaPredicted RBP24.47■■□□□ 1.51
ARHGEF28-205ENST00000503341 AAMPQ13685 434 aa24.47■■□□□ 1.51
ARHGEF28-205ENST00000503341 DZIP1LQ8IYY4 767 aaKnown RBP24.47■■□□□ 1.51
ARHGEF28-205ENST00000503341 TSPYL6Q8N831 410 aa24.47■■□□□ 1.51
ARHGEF28-205ENST00000503341 GAS2L2Q8NHY3 880 aa24.47■■□□□ 1.51
ARHGEF28-205ENST00000503341 ARHGEF25Q86VW2 580 aa24.46■■□□□ 1.51
ARHGEF28-205ENST00000503341 NOB1Q9ULX3 412 aaKnown RBP24.46■■□□□ 1.51
ARHGEF28-205ENST00000503341 CHL1O00533 1208 aa24.45■■□□□ 1.51
ARHGEF28-205ENST00000503341 XIRP1Q702N8 1843 aaKnown RBP24.45■■□□□ 1.5
ARHGEF28-205ENST00000503341 KIF16BQ96L93 1317 aa24.45■■□□□ 1.5
ARHGEF28-205ENST00000503341 ALS2Q96Q42 1657 aa24.45■■□□□ 1.5
ARHGEF28-205ENST00000503341 TRIM27P14373 513 aa24.45■■□□□ 1.5
ARHGEF28-205ENST00000503341 ATF7IPQ6VMQ6 1270 aa24.45■■□□□ 1.5
ARHGEF28-205ENST00000503341 CRB1P82279 1406 aa24.45■■□□□ 1.5
ARHGEF28-205ENST00000503341 C8orf58Q8NAV2 365 aa24.44■■□□□ 1.5
ARHGEF28-205ENST00000503341 MVPQ14764 893 aaKnown RBP24.43■■□□□ 1.5
ARHGEF28-205ENST00000503341 TWISTNBQ3B726 338 aaPredicted RBP24.43■■□□□ 1.5
ARHGEF28-205ENST00000503341 ZBTB7CA1YPR0 619 aa24.43■■□□□ 1.5
ARHGEF28-205ENST00000503341 FTSJ3Q8IY81 847 aaKnown RBP24.43■■□□□ 1.5
ARHGEF28-205ENST00000503341 IPO8O15397 1037 aaKnown RBP24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms