RNA–Protein interactions for RNA: ENST00000498353.5

NECAB3-216, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 3

Gene NECAB3, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-216ENST00000498353 SF3B2Q13435 895 aaKnown RBP24.7■■□□□ 1.54
NECAB3-216ENST00000498353 COL18A1P39060 1754 aa24.7■■□□□ 1.54
NECAB3-216ENST00000498353 NFAT5O94916 1531 aa24.69■■□□□ 1.54
NECAB3-216ENST00000498353 USP54Q70EL1 1684 aa24.67■■□□□ 1.54
NECAB3-216ENST00000498353 FAM182BQ5T319 152 aa24.67■■□□□ 1.54
NECAB3-216ENST00000498353 WDR17Q8IZU2 1322 aa24.65■■□□□ 1.54
NECAB3-216ENST00000498353 CDCA8Q53HL2 280 aa24.65■■□□□ 1.54
NECAB3-216ENST00000498353 TOM1L2Q6ZVM7 507 aa24.65■■□□□ 1.54
NECAB3-216ENST00000498353 DEFB132Q7Z7B7 95 aa24.65■■□□□ 1.54
NECAB3-216ENST00000498353 PDE3BQ13370 1112 aa24.64■■□□□ 1.54
NECAB3-216ENST00000498353 ANKRD36BQ8N2N9 1353 aa24.64■■□□□ 1.53
NECAB3-216ENST00000498353 FAM196AQ6ZSG2 479 aa24.63■■□□□ 1.53
NECAB3-216ENST00000498353 OVOS2A0A0J9YW53 1432 aa24.62■■□□□ 1.53
NECAB3-216ENST00000498353 OVOS2Q6IE36 1432 aa24.62■■□□□ 1.53
NECAB3-216ENST00000498353 ABCC6O95255 1503 aa24.62■■□□□ 1.53
NECAB3-216ENST00000498353 BAG6P46379 1132 aa24.59■■□□□ 1.53
NECAB3-216ENST00000498353 CARD10Q9BWT7 1032 aa24.59■■□□□ 1.53
NECAB3-216ENST00000498353 CSB-PGBD3P0DP91 1061 aa24.58■■□□□ 1.53
NECAB3-216ENST00000498353 PARP4Q9UKK3 1724 aaKnown RBP24.58■■□□□ 1.52
NECAB3-216ENST00000498353 COG3Q96JB2 828 aa24.56■■□□□ 1.52
NECAB3-216ENST00000498353 CDCA7Q9BWT1 371 aaPredicted RBP24.56■■□□□ 1.52
NECAB3-216ENST00000498353 RGPD1P0DJD0 1748 aa24.55■■□□□ 1.52
NECAB3-216ENST00000498353 RGPD5Q99666 1765 aa24.55■■□□□ 1.52
NECAB3-216ENST00000498353 ERBB3P21860 1342 aa24.55■■□□□ 1.52
NECAB3-216ENST00000498353 DISP2A7MBM2 1401 aa24.54■■□□□ 1.52
NECAB3-216ENST00000498353 TRIM37O94972 964 aa24.54■■□□□ 1.52
NECAB3-216ENST00000498353 DDB1Q16531 1140 aa24.54■■□□□ 1.52
NECAB3-216ENST00000498353 C11orf95C9JLR9 678 aaPredicted RBP24.53■■□□□ 1.52
NECAB3-216ENST00000498353 CCDC7Q96M83 1385 aa24.53■■□□□ 1.52
NECAB3-216ENST00000498353 FYB1O15117 783 aa24.52■■□□□ 1.52
NECAB3-216ENST00000498353 EN1Q05925 392 aaPredicted RBP24.52■■□□□ 1.52
NECAB3-216ENST00000498353 EIF4G2P78344 907 aaKnown RBP eCLIP24.51■■□□□ 1.511e-8■■■■■ 29.7
NECAB3-216ENST00000498353 IP6K1Q92551 441 aa24.51■■□□□ 1.51
NECAB3-216ENST00000498353 LTN1O94822 1766 aa24.51■■□□□ 1.51
NECAB3-216ENST00000498353 ANKRD24Q8TF21 1146 aa24.5■■□□□ 1.51
NECAB3-216ENST00000498353 TNS1Q9HBL0 1735 aaKnown RBP24.49■■□□□ 1.51
NECAB3-216ENST00000498353 LRRC37A3O60309 1634 aa24.49■■□□□ 1.51
NECAB3-216ENST00000498353 OVOS2A0A0G2JMS6 1433 aa24.48■■□□□ 1.51
NECAB3-216ENST00000498353 NLRP2Q9NX02 1062 aa24.48■■□□□ 1.51
NECAB3-216ENST00000498353 MAP3K19Q56UN5 1328 aa24.47■■□□□ 1.51
NECAB3-216ENST00000498353 APBA3O96018 575 aa24.47■■□□□ 1.51
NECAB3-216ENST00000498353 CARD14Q9BXL6 1004 aa24.47■■□□□ 1.51
NECAB3-216ENST00000498353 GGNBP2Q9H3C7 697 aa24.47■■□□□ 1.51
NECAB3-216ENST00000498353 HSPA5P11021 654 aaKnown RBP24.46■■□□□ 1.51
NECAB3-216ENST00000498353 FBLN1P23142 703 aa24.46■■□□□ 1.51
NECAB3-216ENST00000498353 CAMKK2Q96RR4 588 aa24.46■■□□□ 1.51
NECAB3-216ENST00000498353 WNK3Q9BYP7 1800 aa24.46■■□□□ 1.51
NECAB3-216ENST00000498353 MYOM1P52179 1685 aa24.46■■□□□ 1.51
NECAB3-216ENST00000498353 EXOC5O00471 708 aa24.45■■□□□ 1.5
NECAB3-216ENST00000498353 EZH2Q15910 746 aaKnown RBP24.45■■□□□ 1.5
NECAB3-216ENST00000498353 MARCH10Q8NA82 808 aaPredicted RBP24.45■■□□□ 1.5
NECAB3-216ENST00000498353 PEAK1Q9H792 1746 aa24.44■■□□□ 1.5
NECAB3-216ENST00000498353 PARD3Q8TEW0 1356 aa24.43■■□□□ 1.5
NECAB3-216ENST00000498353 HOXC9P31274 260 aa24.43■■□□□ 1.5
NECAB3-216ENST00000498353 AMPHP49418 695 aa24.43■■□□□ 1.5
NECAB3-216ENST00000498353 BCL9O00512 1426 aa24.43■■□□□ 1.5
NECAB3-216ENST00000498353 NSD3Q9BZ95 1437 aa24.42■■□□□ 1.5
NECAB3-216ENST00000498353 IL2RBP14784 551 aa24.41■■□□□ 1.5
NECAB3-216ENST00000498353 SRCAPQ6ZRS2 3230 aa24.4■■□□□ 1.5
NECAB3-216ENST00000498353 RRS1Q15050 365 aaKnown RBP24.4■■□□□ 1.5
NECAB3-216ENST00000498353 RTL1A6NKG5 1358 aa24.4■■□□□ 1.5
NECAB3-216ENST00000498353 TNS2Q63HR2 1409 aa24.39■■□□□ 1.5
NECAB3-216ENST00000498353 LTV1Q96GA3 475 aaPredicted RBP24.39■■□□□ 1.49
NECAB3-216ENST00000498353 POLR3GLQ9BT43 218 aa24.38■■□□□ 1.49
NECAB3-216ENST00000498353 BCL11BQ9C0K0 894 aaPredicted RBP24.37■■□□□ 1.49
NECAB3-216ENST00000498353 KIF20BQ96Q89 1820 aa24.36■■□□□ 1.49
NECAB3-216ENST00000498353 CGNL1Q0VF96 1302 aa24.35■■□□□ 1.49
NECAB3-216ENST00000498353 FAM208AQ9UK61 1670 aaKnown RBP24.34■■□□□ 1.49
NECAB3-216ENST00000498353 KIF24Q5T7B8 1368 aa24.34■■□□□ 1.49
NECAB3-216ENST00000498353 PSDA5PKW4 1024 aaPredicted RBP24.34■■□□□ 1.49
NECAB3-216ENST00000498353 PLSCR1O15162 318 aa24.34■■□□□ 1.49
NECAB3-216ENST00000498353 SBF2Q86WG5 1849 aa24.33■■□□□ 1.49
NECAB3-216ENST00000498353 PTF1AQ7RTS3 328 aa24.33■■□□□ 1.49
NECAB3-216ENST00000498353 INSRP06213 1382 aa24.31■■□□□ 1.48
NECAB3-216ENST00000498353 HSP90AB2PQ58FF8 381 aa24.31■■□□□ 1.48
NECAB3-216ENST00000498353 RREB1Q92766 1687 aa24.3■■□□□ 1.48
NECAB3-216ENST00000498353 FLT4P35916 1363 aa24.3■■□□□ 1.48
NECAB3-216ENST00000498353 R3HDM1Q15032 1099 aaKnown RBP24.3■■□□□ 1.48
NECAB3-216ENST00000498353 NBPF6Q5VWK0 638 aa24.29■■□□□ 1.48
NECAB3-216ENST00000498353 NBPF4Q96M43 638 aa24.29■■□□□ 1.48
NECAB3-216ENST00000498353 PANK3Q9H999 370 aa24.29■■□□□ 1.48
NECAB3-216ENST00000498353 SMG6Q86US8 1419 aaKnown RBP24.28■■□□□ 1.48
NECAB3-216ENST00000498353 EMILIN1Q9Y6C2 1016 aa24.28■■□□□ 1.48
NECAB3-216ENST00000498353 NBPF14Q5TI25 921 aa24.27■■□□□ 1.48
NECAB3-216ENST00000498353 KCNQ2O43526 872 aa24.26■■□□□ 1.47
NECAB3-216ENST00000498353 RGPD3A6NKT7 1758 aaPredicted RBP24.26■■□□□ 1.47
NECAB3-216ENST00000498353 RGPD4Q7Z3J3 1758 aa24.26■■□□□ 1.47
NECAB3-216ENST00000498353 NUP188Q5SRE5 1749 aa24.25■■□□□ 1.47
NECAB3-216ENST00000498353 PROM2Q8N271 834 aa24.24■■□□□ 1.47
NECAB3-216ENST00000498353 DDX54Q8TDD1 881 aaKnown RBP24.24■■□□□ 1.47
NECAB3-216ENST00000498353 ACSBG1Q96GR2 724 aa24.24■■□□□ 1.47
NECAB3-216ENST00000498353 ZCRB1Q8TBF4 217 aaKnown RBP24.23■■□□□ 1.47
NECAB3-216ENST00000498353 RGPD2P0DJD1 1756 aa24.23■■□□□ 1.47
NECAB3-216ENST00000498353 MEGF6O75095 1541 aa24.22■■□□□ 1.47
NECAB3-216ENST00000498353 WASHC2AQ641Q2 1341 aa24.22■■□□□ 1.47
NECAB3-216ENST00000498353 USHBP1Q8N6Y0 703 aa24.22■■□□□ 1.47
NECAB3-216ENST00000498353 NHSQ6T4R5 1651 aa24.21■■□□□ 1.47
NECAB3-216ENST00000498353 PPM1GO15355 546 aaPredicted RBP24.21■■□□□ 1.47
NECAB3-216ENST00000498353 POLKQ9UBT6 870 aa24.21■■□□□ 1.47
NECAB3-216ENST00000498353 RAPGEF4Q8WZA2 1011 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms