RNA–Protein interactions for RNA: ENST00000498353.5

NECAB3-216, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 3

Gene NECAB3, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-216ENST00000498353 NISCHQ9Y2I1 1504 aa43.41■■■■■ 4.54
NECAB3-216ENST00000498353 CCDC180Q9P1Z9 1646 aa38.71■■■■□ 3.79
NECAB3-216ENST00000498353 ABCC9O60706 1549 aa38.27■■■■□ 3.72
NECAB3-216ENST00000498353 RB1CC1Q8TDY2 1594 aa36.64■■■■□ 3.46
NECAB3-216ENST00000498353 NACADO15069 1562 aa36.53■■■■□ 3.44
NECAB3-216ENST00000498353 DCAF8L2P0C7V8 631 aa36.42■■■■□ 3.42
NECAB3-216ENST00000498353 MYO15BQ96JP2 1530 aa36.22■■■■□ 3.39
NECAB3-216ENST00000498353 ZCCHC6Q5VYS8 1495 aaKnown RBP36.06■■■■□ 3.36
NECAB3-216ENST00000498353 DCAF1Q9Y4B6 1507 aa35.91■■■■□ 3.34
NECAB3-216ENST00000498353 UNC13AQ9UPW8 1703 aa35.73■■■■□ 3.31
NECAB3-216ENST00000498353 PABPN1Q86U42 306 aaKnown RBP eCLIP35.72■■■■□ 3.316e-9■■□□□ 12
NECAB3-216ENST00000498353 BICRAQ9NZM4 1560 aa35.55■■■■□ 3.28
NECAB3-216ENST00000498353 DNAJC5BQ9UF47 199 aa35.52■■■■□ 3.28
NECAB3-216ENST00000498353 SCRIBQ14160 1630 aa35.27■■■■□ 3.24
NECAB3-216ENST00000498353 SHROOM4Q9ULL8 1493 aa35.17■■■■□ 3.22
NECAB3-216ENST00000498353 EIF4G1Q04637 1599 aaKnown RBP34.65■■■■□ 3.14
NECAB3-216ENST00000498353 CC2D2AQ9P2K1 1620 aa34.59■■■■□ 3.13
NECAB3-216ENST00000498353 CECR2Q9BXF3 1484 aa34.44■■■■□ 3.1
NECAB3-216ENST00000498353 NCAPD3P42695 1498 aa33.75■■■□□ 2.99
NECAB3-216ENST00000498353 SMARCA4P51532 1647 aa33.72■■■□□ 2.99
NECAB3-216ENST00000498353 ATAD2BQ9ULI0 1458 aa33.69■■■□□ 2.98
NECAB3-216ENST00000498353 BAZ1AQ9NRL2 1556 aaPredicted RBP33.65■■■□□ 2.98
NECAB3-216ENST00000498353 SMARCA2P51531 1590 aa33.6■■■□□ 2.97
NECAB3-216ENST00000498353 HMGXB3Q12766 1538 aa33.5■■■□□ 2.95
NECAB3-216ENST00000498353 MROH2BQ7Z745 1585 aa33.43■■■□□ 2.94
NECAB3-216ENST00000498353 PEG3Q9GZU2 1588 aa33.43■■■□□ 2.94
NECAB3-216ENST00000498353 BAZ1BQ9UIG0 1483 aaKnown RBP33.36■■■□□ 2.93
NECAB3-216ENST00000498353 WIZO95785 1651 aa33.02■■■□□ 2.88
NECAB3-216ENST00000498353 ERCC6Q03468 1493 aa33■■■□□ 2.87
NECAB3-216ENST00000498353 NESP48681 1621 aa33■■■□□ 2.87
NECAB3-216ENST00000498353 RSF1Q96T23 1441 aaPredicted RBP32.94■■■□□ 2.86
NECAB3-216ENST00000498353 LAMC3Q9Y6N6 1575 aa32.87■■■□□ 2.85
NECAB3-216ENST00000498353 CUX2O14529 1486 aa32.82■■■□□ 2.84
NECAB3-216ENST00000498353 CADPSQ9ULU8 1353 aa32.74■■■□□ 2.83
NECAB3-216ENST00000498353 PDS5BQ9NTI5 1447 aa32.69■■■□□ 2.82
NECAB3-216ENST00000498353 TOP2AP11388 1531 aaKnown RBP32.67■■■□□ 2.82
NECAB3-216ENST00000498353 THOC2Q8NI27 1593 aaKnown RBP32.56■■■□□ 2.8
NECAB3-216ENST00000498353 KIF21AQ7Z4S6 1674 aa32.54■■■□□ 2.8
NECAB3-216ENST00000498353 CFTRP13569 1480 aa32.46■■■□□ 2.79
NECAB3-216ENST00000498353 MRC2Q9UBG0 1479 aa32.35■■■□□ 2.77
NECAB3-216ENST00000498353 FANCD2Q9BXW9 1451 aa32.33■■■□□ 2.77
NECAB3-216ENST00000498353 CCDC88BA6NC98 1476 aa32.31■■■□□ 2.76
NECAB3-216ENST00000498353 CEP164Q9UPV0 1460 aa32.31■■■□□ 2.76
NECAB3-216ENST00000498353 DNAJC5Q9H3Z4 198 aa32.31■■■□□ 2.76
NECAB3-216ENST00000498353 WDR62O43379 1518 aa32.26■■■□□ 2.75
NECAB3-216ENST00000498353 PRDM2Q13029 1718 aa32.06■■■□□ 2.72
NECAB3-216ENST00000498353 URB2Q14146 1524 aaKnown RBP32.02■■■□□ 2.72
NECAB3-216ENST00000498353 SUPT5HO00267 1087 aaKnown RBP31.8■■■□□ 2.68
NECAB3-216ENST00000498353 ABCC8Q09428 1581 aa31.77■■■□□ 2.68
NECAB3-216ENST00000498353 TOPBP1Q92547 1522 aa31.76■■■□□ 2.68
NECAB3-216ENST00000498353 DNMBPQ6XZF7 1577 aa31.68■■■□□ 2.66
NECAB3-216ENST00000498353 IFT140Q96RY7 1462 aa31.67■■■□□ 2.66
NECAB3-216ENST00000498353 ZNF608Q9ULD9 1512 aaPredicted RBP31.55■■■□□ 2.64
NECAB3-216ENST00000498353 POLA1P09884 1462 aaPredicted RBP31.48■■■□□ 2.63
NECAB3-216ENST00000498353 TARBP1Q13395 1621 aaKnown RBP31.44■■■□□ 2.62
NECAB3-216ENST00000498353 OSCARQ8IYS5 282 aa31.43■■■□□ 2.62
NECAB3-216ENST00000498353 CUX1P39880 1505 aa31.38■■■□□ 2.61
NECAB3-216ENST00000498353 EIF4G3O43432 1585 aaKnown RBP31.37■■■□□ 2.61
NECAB3-216ENST00000498353 SOGA1O94964 1423 aa31.36■■■□□ 2.61
NECAB3-216ENST00000498353 RAD54L2Q9Y4B4 1467 aa31.34■■■□□ 2.61
NECAB3-216ENST00000498353 AQRO60306 1485 aaKnown RBP eCLIP31.33■■■□□ 2.617e-7■■■■□ 25.7
NECAB3-216ENST00000498353 FGD5Q6ZNL6 1462 aa31.33■■■□□ 2.61
NECAB3-216ENST00000498353 TDRD9Q8NDG6 1382 aaKnown RBP31.23■■■□□ 2.59
NECAB3-216ENST00000498353 WDR97A6NE52 1622 aa31.17■■■□□ 2.58
NECAB3-216ENST00000498353 WRNQ14191 1432 aaPredicted RBP eCLIP31.06■■■□□ 2.56
NECAB3-216ENST00000498353 FBLN2P98095 1184 aa31.04■■■□□ 2.56
NECAB3-216ENST00000498353 ABCA10Q8WWZ4 1543 aa31.03■■■□□ 2.56
NECAB3-216ENST00000498353 GRIN2BQ13224 1484 aa31.03■■■□□ 2.56
NECAB3-216ENST00000498353 TRIM41Q8WV44 630 aa31.02■■■□□ 2.56
NECAB3-216ENST00000498353 SNAPC4Q5SXM2 1469 aa31.01■■■□□ 2.56
NECAB3-216ENST00000498353 CHD1O14646 1710 aa31.01■■■□□ 2.56
NECAB3-216ENST00000498353 TOP2BQ02880 1626 aa31.01■■■□□ 2.55
NECAB3-216ENST00000498353 BIVM-ERCC5R4GMW8 1640 aa30.98■■■□□ 2.55
NECAB3-216ENST00000498353 GAPVD1Q14C86 1478 aa30.98■■■□□ 2.55
NECAB3-216ENST00000498353 MAGI1Q96QZ7 1491 aaPredicted RBP30.98■■■□□ 2.55
NECAB3-216ENST00000498353 SYNJ1O43426 1573 aa30.96■■■□□ 2.55
NECAB3-216ENST00000498353 CHMP7Q8WUX9 453 aaPredicted RBP30.91■■■□□ 2.54
NECAB3-216ENST00000498353 ABCA5Q8WWZ7 1642 aa30.9■■■□□ 2.54
NECAB3-216ENST00000498353 RIMBP3CA6NJZ7 1639 aa30.88■■■□□ 2.53
NECAB3-216ENST00000498353 RIMBP3BA6NNM3 1639 aa30.88■■■□□ 2.53
NECAB3-216ENST00000498353 RIMBP3Q9UFD9 1639 aa30.88■■■□□ 2.53
NECAB3-216ENST00000498353 SYNJ2O15056 1496 aa30.88■■■□□ 2.53
NECAB3-216ENST00000498353 ARHGEF11O15085 1522 aa30.87■■■□□ 2.53
NECAB3-216ENST00000498353 PBRM1Q86U86 1689 aa30.85■■■□□ 2.53
NECAB3-216ENST00000498353 CLASP1Q7Z460 1538 aa30.73■■■□□ 2.51
NECAB3-216ENST00000498353 ERICH3Q5RHP9 1530 aa30.64■■■□□ 2.5
NECAB3-216ENST00000498353 CYB5RLQ6IPT4 315 aa30.64■■■□□ 2.5
NECAB3-216ENST00000498353 ADAMTS12P58397 1594 aa30.63■■■□□ 2.49
NECAB3-216ENST00000498353 FHAD1B1AJZ9 1412 aa30.62■■■□□ 2.49
NECAB3-216ENST00000498353 GRIN2AQ12879 1464 aa30.62■■■□□ 2.49
NECAB3-216ENST00000498353 ARAP1Q96P48 1450 aa30.6■■■□□ 2.49
NECAB3-216ENST00000498353 NUP160Q12769 1436 aa30.52■■■□□ 2.48
NECAB3-216ENST00000498353 CEP170Q5SW79 1584 aa30.46■■■□□ 2.47
NECAB3-216ENST00000498353 KIF27Q86VH2 1401 aa30.44■■■□□ 2.46
NECAB3-216ENST00000498353 IGF1RP08069 1367 aa30.4■■■□□ 2.46
NECAB3-216ENST00000498353 SHROOM2Q13796 1616 aa30.29■■■□□ 2.44
NECAB3-216ENST00000498353 ERCC6L2Q5T890 1561 aa30.27■■■□□ 2.44
NECAB3-216ENST00000498353 CUL7Q14999 1698 aa30.26■■■□□ 2.43
NECAB3-216ENST00000498353 JPH4Q96JJ6 628 aa30.23■■■□□ 2.43
NECAB3-216ENST00000498353 CARMIL1Q5VZK9 1371 aa30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms