RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, human

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDKN2A-208	ENST00000498124	RGPD5	Q99666	1765 aa		32.08	■■■□□ 2.73
CDKN2A-208	ENST00000498124	EZH2	Q15910	746 aa	Known RBP	32.07	■■■□□ 2.72
CDKN2A-208	ENST00000498124	CAMKK2	Q96RR4	588 aa		32.07	■■■□□ 2.72
CDKN2A-208	ENST00000498124	RREB1	Q92766	1687 aa		32.07	■■■□□ 2.72
CDKN2A-208	ENST00000498124	WDR17	Q8IZU2	1322 aa		32.04	■■■□□ 2.72
CDKN2A-208	ENST00000498124	KCNH5	Q8NCM2	988 aa		32.04	■■■□□ 2.72
CDKN2A-208	ENST00000498124	ABCC6	O95255	1503 aa		32.03	■■■□□ 2.72
CDKN2A-208	ENST00000498124	USP31	Q70CQ4	1352 aa		32.03	■■■□□ 2.72
CDKN2A-208	ENST00000498124	SOX12	O15370	315 aa		32.02	■■■□□ 2.72
CDKN2A-208	ENST00000498124	PARD3	Q8TEW0	1356 aa		32.02	■■■□□ 2.72
CDKN2A-208	ENST00000498124	NUP188	Q5SRE5	1749 aa		32.01	■■■□□ 2.72
CDKN2A-208	ENST00000498124	APBA3	O96018	575 aa		32.01	■■■□□ 2.71
CDKN2A-208	ENST00000498124	TOM1L2	Q6ZVM7	507 aa		32.01	■■■□□ 2.71
CDKN2A-208	ENST00000498124	OVOS2	A0A0G2JMS6	1433 aa		31.99	■■■□□ 2.71
CDKN2A-208	ENST00000498124	OVOS2	A0A0J9YW53	1432 aa		31.99	■■■□□ 2.71
CDKN2A-208	ENST00000498124	OVOS2	Q6IE36	1432 aa		31.99	■■■□□ 2.71
CDKN2A-208	ENST00000498124	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	31.98	■■■□□ 2.71
CDKN2A-208	ENST00000498124	R3HDM1	Q15032	1099 aa	Known RBP	31.97	■■■□□ 2.71
CDKN2A-208	ENST00000498124	NME9	Q86XW9	330 aa		31.97	■■■□□ 2.71
CDKN2A-208	ENST00000498124	SLC12A5	Q9H2X9	1139 aa		31.97	■■■□□ 2.71
CDKN2A-208	ENST00000498124	SBF2	Q86WG5	1849 aa		31.97	■■■□□ 2.71
CDKN2A-208	ENST00000498124		A0A1W2PP64	1363 aa		31.96	■■■□□ 2.71
CDKN2A-208	ENST00000498124	TESK2	Q96S53	571 aa		31.96	■■■□□ 2.71
CDKN2A-208	ENST00000498124	EDC4	Q6P2E9	1401 aa	Known RBP	31.95	■■■□□ 2.71
CDKN2A-208	ENST00000498124	TMC1	Q8TDI8	760 aa		31.95	■■■□□ 2.71
CDKN2A-208	ENST00000498124	LTN1	O94822	1766 aa		31.94	■■■□□ 2.7
CDKN2A-208	ENST00000498124	DDB1	Q16531	1140 aa		31.93	■■■□□ 2.7
CDKN2A-208	ENST00000498124	PUS7	Q96PZ0	661 aa	Known RBP	31.93	■■■□□ 2.7
CDKN2A-208	ENST00000498124	CARD10	Q9BWT7	1032 aa		31.92	■■■□□ 2.7
CDKN2A-208	ENST00000498124	RGPD3	A6NKT7	1758 aa	Predicted RBP	31.91	■■■□□ 2.7
CDKN2A-208	ENST00000498124	RGPD4	Q7Z3J3	1758 aa		31.91	■■■□□ 2.7
CDKN2A-208	ENST00000498124	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	31.9	■■■□□ 2.7
CDKN2A-208	ENST00000498124	C11orf95	C9JLR9	678 aa	Predicted RBP	31.89	■■■□□ 2.7
CDKN2A-208	ENST00000498124	ST20-MTHFS	A0A0A6YYL1	179 aa		31.88	■■■□□ 2.69
CDKN2A-208	ENST00000498124	CSB-PGBD3	P0DP91	1061 aa		31.88	■■■□□ 2.69
CDKN2A-208	ENST00000498124	MARCH10	Q8NA82	808 aa	Predicted RBP	31.88	■■■□□ 2.69
CDKN2A-208	ENST00000498124	CDCA7	Q9BWT1	371 aa	Predicted RBP	31.88	■■■□□ 2.69
CDKN2A-208	ENST00000498124	BCL9	O00512	1426 aa		31.88	■■■□□ 2.69
CDKN2A-208	ENST00000498124	CCDC7	Q96M83	1385 aa		31.86	■■■□□ 2.69
CDKN2A-208	ENST00000498124	TERF2IP	Q9NYB0	399 aa		31.86	■■■□□ 2.69
CDKN2A-208	ENST00000498124	ERBB3	P21860	1342 aa		31.85	■■■□□ 2.69
CDKN2A-208	ENST00000498124	PTF1A	Q7RTS3	328 aa		31.85	■■■□□ 2.69
CDKN2A-208	ENST00000498124	NINL	Q9Y2I6	1382 aa		31.84	■■■□□ 2.69
CDKN2A-208	ENST00000498124	TNS2	Q63HR2	1409 aa		31.83	■■■□□ 2.69
CDKN2A-208	ENST00000498124	CLSPN	Q9HAW4	1339 aa		31.82	■■■□□ 2.68
CDKN2A-208	ENST00000498124	CCER1	Q8TC90	406 aa	Predicted RBP	31.79	■■■□□ 2.68
CDKN2A-208	ENST00000498124	BCL11B	Q9C0K0	894 aa	Predicted RBP	31.79	■■■□□ 2.68
CDKN2A-208	ENST00000498124	USP47	Q96K76	1375 aa		31.77	■■■□□ 2.68
CDKN2A-208	ENST00000498124	PLSCR1	O15162	318 aa		31.76	■■■□□ 2.67
CDKN2A-208	ENST00000498124	ANKRD24	Q8TF21	1146 aa		31.74	■■■□□ 2.67
CDKN2A-208	ENST00000498124	ANKRD36B	Q8N2N9	1353 aa		31.73	■■■□□ 2.67
CDKN2A-208	ENST00000498124	EXOC5	O00471	708 aa		31.73	■■■□□ 2.67
CDKN2A-208	ENST00000498124	NBPF14	Q5TI25	921 aa		31.73	■■■□□ 2.67
CDKN2A-208	ENST00000498124	NLRP2	Q9NX02	1062 aa		31.73	■■■□□ 2.67
CDKN2A-208	ENST00000498124	NHS	Q6T4R5	1651 aa		31.73	■■■□□ 2.67
CDKN2A-208	ENST00000498124	FAM208A	Q9UK61	1670 aa	Known RBP	31.7	■■■□□ 2.67
CDKN2A-208	ENST00000498124	SLC24A1	O60721	1099 aa		31.7	■■■□□ 2.67
CDKN2A-208	ENST00000498124	PROM2	Q8N271	834 aa		31.7	■■■□□ 2.67
CDKN2A-208	ENST00000498124	ANO8	Q9HCE9	1232 aa	Predicted RBP	31.7	■■■□□ 2.67
CDKN2A-208	ENST00000498124	IP6K1	Q92551	441 aa		31.68	■■■□□ 2.66
CDKN2A-208	ENST00000498124	CASZ1	Q86V15	1759 aa		31.67	■■■□□ 2.66
CDKN2A-208	ENST00000498124	IL2RB	P14784	551 aa		31.67	■■■□□ 2.66
CDKN2A-208	ENST00000498124	COG3	Q96JB2	828 aa		31.65	■■■□□ 2.66
CDKN2A-208	ENST00000498124	MAP3K19	Q56UN5	1328 aa		31.65	■■■□□ 2.66
CDKN2A-208	ENST00000498124	KCNQ2	O43526	872 aa		31.64	■■■□□ 2.66
CDKN2A-208	ENST00000498124	FBLN1	P23142	703 aa		31.64	■■■□□ 2.66
CDKN2A-208	ENST00000498124	TMF1	P82094	1093 aa		31.64	■■■□□ 2.66
CDKN2A-208	ENST00000498124	MYOM1	P52179	1685 aa		31.63	■■■□□ 2.65
CDKN2A-208	ENST00000498124	HOXC9	P31274	260 aa		31.6	■■■□□ 2.65
CDKN2A-208	ENST00000498124	RGPD2	P0DJD1	1756 aa		31.6	■■■□□ 2.65
CDKN2A-208	ENST00000498124	TXNRD1	Q16881	649 aa		31.59	■■■□□ 2.65
CDKN2A-208	ENST00000498124	LTV1	Q96GA3	475 aa	Predicted RBP	31.59	■■■□□ 2.65
CDKN2A-208	ENST00000498124	BTAF1	O14981	1849 aa		31.59	■■■□□ 2.65
CDKN2A-208	ENST00000498124	FYB1	O15117	783 aa		31.58	■■■□□ 2.65
CDKN2A-208	ENST00000498124	ACSBG1	Q96GR2	724 aa		31.58	■■■□□ 2.65
CDKN2A-208	ENST00000498124	KIF20B	Q96Q89	1820 aa		31.58	■■■□□ 2.65
CDKN2A-208	ENST00000498124	PAPPA	Q13219	1627 aa		31.57	■■■□□ 2.64
CDKN2A-208	ENST00000498124	RTL1	A6NKG5	1358 aa		31.56	■■■□□ 2.64
CDKN2A-208	ENST00000498124	SHANK3	Q9BYB0	1731 aa		31.56	■■■□□ 2.64
CDKN2A-208	ENST00000498124	PDGFD	Q9GZP0	370 aa	Predicted RBP	31.56	■■■□□ 2.64
CDKN2A-208	ENST00000498124	TIMELESS	Q9UNS1	1208 aa		31.56	■■■□□ 2.64
CDKN2A-208	ENST00000498124	GGNBP2	Q9H3C7	697 aa		31.55	■■■□□ 2.64
CDKN2A-208	ENST00000498124	SPON1	Q9HCB6	807 aa		31.54	■■■□□ 2.64
CDKN2A-208	ENST00000498124	AMPH	P49418	695 aa		31.53	■■■□□ 2.64
CDKN2A-208	ENST00000498124	RRS1	Q15050	365 aa	Known RBP	31.52	■■■□□ 2.64
CDKN2A-208	ENST00000498124	MEGF6	O75095	1541 aa		31.52	■■■□□ 2.64
CDKN2A-208	ENST00000498124	CDCA8	Q53HL2	280 aa		31.5	■■■□□ 2.63
CDKN2A-208	ENST00000498124	CARD14	Q9BXL6	1004 aa		31.48	■■■□□ 2.63
CDKN2A-208	ENST00000498124	DOT1L	Q8TEK3	1739 aa		31.47	■■■□□ 2.63
CDKN2A-208	ENST00000498124	SLC15A2	Q16348	729 aa		31.46	■■■□□ 2.63
CDKN2A-208	ENST00000498124	STK32B	Q9NY57	414 aa		31.46	■■■□□ 2.63
CDKN2A-208	ENST00000498124	DDX54	Q8TDD1	881 aa	Known RBP	31.45	■■■□□ 2.63
CDKN2A-208	ENST00000498124	NSD3	Q9BZ95	1437 aa		31.45	■■■□□ 2.63
CDKN2A-208	ENST00000498124	NBPF6	Q5VWK0	638 aa		31.44	■■■□□ 2.62
CDKN2A-208	ENST00000498124	NBPF4	Q96M43	638 aa		31.44	■■■□□ 2.62
CDKN2A-208	ENST00000498124	ZBTB7A	O95365	584 aa		31.42	■■■□□ 2.62
CDKN2A-208	ENST00000498124	KAT6B	Q8WYB5	2073 aa		31.42	■■■□□ 2.62
CDKN2A-208	ENST00000498124	PPP1R1B	Q9UD71	204 aa	Predicted RBP	31.41	■■■□□ 2.62
CDKN2A-208	ENST00000498124	NSD2	O96028	1365 aa		31.41	■■■□□ 2.62
CDKN2A-208	ENST00000498124	INSR	P06213	1382 aa		31.41	■■■□□ 2.62

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