RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-233ENST00000496030 SPON1Q9HCB6 807 aa16.5■□□□□ 0.23
APTX-233ENST00000496030 KCNQ2O43526 872 aa16.49■□□□□ 0.23
APTX-233ENST00000496030 EDC4Q6P2E9 1401 aaKnown RBP16.49■□□□□ 0.23
APTX-233ENST00000496030 NUTM2GQ5VZR2 741 aa16.48■□□□□ 0.23
APTX-233ENST00000496030 ABTB2Q8N961 1025 aa16.48■□□□□ 0.23
APTX-233ENST00000496030 ZNF784Q8NCA9 323 aaPredicted RBP16.48■□□□□ 0.23
APTX-233ENST00000496030 PIK3C2AO00443 1686 aa16.48■□□□□ 0.23
APTX-233ENST00000496030 TTC21AQ8NDW8 1320 aa16.47■□□□□ 0.23
APTX-233ENST00000496030 NBPF14Q5TI25 921 aa16.47■□□□□ 0.23
APTX-233ENST00000496030 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.47■□□□□ 0.23
APTX-233ENST00000496030 PRDM11Q9NQV5 511 aa16.47■□□□□ 0.23
APTX-233ENST00000496030 DCAF8L1A6NGE4 600 aa16.46■□□□□ 0.23
APTX-233ENST00000496030 CHRNA2Q15822 529 aa16.46■□□□□ 0.23
APTX-233ENST00000496030 NME9Q86XW9 330 aa16.46■□□□□ 0.23
APTX-233ENST00000496030 PANK3Q9H999 370 aa16.46■□□□□ 0.23
APTX-233ENST00000496030 USP19O94966 1318 aa16.45■□□□□ 0.22
APTX-233ENST00000496030 STRN4Q9NRL3 753 aa16.45■□□□□ 0.22
APTX-233ENST00000496030 USP31Q70CQ4 1352 aa16.45■□□□□ 0.22
APTX-233ENST00000496030 KIAA0232Q92628 1395 aa16.45■□□□□ 0.22
APTX-233ENST00000496030 PHRF1Q9P1Y6 1649 aaKnown RBP16.45■□□□□ 0.22
APTX-233ENST00000496030 CASZ1Q86V15 1759 aa16.44■□□□□ 0.22
APTX-233ENST00000496030 SENP3-EIF4A1A0A087X0R7 540 aa16.44■□□□□ 0.22
APTX-233ENST00000496030 NLRP6P59044 892 aa16.44■□□□□ 0.22
APTX-233ENST00000496030 NLRP13Q86W25 1043 aa16.44■□□□□ 0.22
APTX-233ENST00000496030 USP35Q9P2H5 1018 aa16.44■□□□□ 0.22
APTX-233ENST00000496030 FYB1O15117 783 aa16.43■□□□□ 0.22
APTX-233ENST00000496030 IFFO2Q5TF58 517 aa16.42■□□□□ 0.22
APTX-233ENST00000496030 USP54Q70EL1 1684 aa16.42■□□□□ 0.22
APTX-233ENST00000496030 NSD3Q9BZ95 1437 aa16.42■□□□□ 0.22
APTX-233ENST00000496030 SLIT3O75094 1523 aa16.41■□□□□ 0.22
APTX-233ENST00000496030 PER1O15534 1290 aaPredicted RBP16.41■□□□□ 0.22
APTX-233ENST00000496030 PDE3BQ13370 1112 aa16.41■□□□□ 0.22
APTX-233ENST00000496030 PDGFDQ9GZP0 370 aaPredicted RBP16.41■□□□□ 0.22
APTX-233ENST00000496030 OVOS2A0A0J9YW53 1432 aa16.4■□□□□ 0.22
APTX-233ENST00000496030 OVOS2Q6IE36 1432 aa16.4■□□□□ 0.22
APTX-233ENST00000496030 GCP02774 474 aa16.4■□□□□ 0.22
APTX-233ENST00000496030 ANO8Q9HCE9 1232 aaPredicted RBP16.4■□□□□ 0.22
APTX-233ENST00000496030 ZC3H6P61129 1189 aaKnown RBP16.39■□□□□ 0.21
APTX-233ENST00000496030 BARGINQ6ZT62 677 aa16.39■□□□□ 0.21
APTX-233ENST00000496030 CHD4Q14839 1912 aa16.39■□□□□ 0.21
APTX-233ENST00000496030 GGNBP2Q9H3C7 697 aa16.38■□□□□ 0.21
APTX-233ENST00000496030 RGPD3A6NKT7 1758 aaPredicted RBP16.38■□□□□ 0.21
APTX-233ENST00000496030 RGPD4Q7Z3J3 1758 aa16.38■□□□□ 0.21
APTX-233ENST00000496030 CEP350Q5VT06 3117 aa16.38■□□□□ 0.21
APTX-233ENST00000496030 SBF2Q86WG5 1849 aa16.38■□□□□ 0.21
APTX-233ENST00000496030 PEAK1Q9H792 1746 aa16.37■□□□□ 0.21
APTX-233ENST00000496030 C1QTNF8P60827 252 aa16.37■□□□□ 0.21
APTX-233ENST00000496030 LARP1Q6PKG0 1096 aaKnown RBP16.37■□□□□ 0.21
APTX-233ENST00000496030 PARP4Q9UKK3 1724 aaKnown RBP16.36■□□□□ 0.21
APTX-233ENST00000496030 KIF20BQ96Q89 1820 aa16.36■□□□□ 0.21
APTX-233ENST00000496030 NFAT5O94916 1531 aa16.36■□□□□ 0.21
APTX-233ENST00000496030 AMER1Q5JTC6 1135 aaPredicted RBP16.36■□□□□ 0.21
APTX-233ENST00000496030 LMO7Q8WWI1 1683 aa16.36■□□□□ 0.21
APTX-233ENST00000496030 CPDO75976 1380 aa16.36■□□□□ 0.21
APTX-233ENST00000496030 ZBTB7AO95365 584 aa16.35■□□□□ 0.21
APTX-233ENST00000496030 PTGER2P43116 358 aa16.35■□□□□ 0.21
APTX-233ENST00000496030 CGNL1Q0VF96 1302 aa16.35■□□□□ 0.21
APTX-233ENST00000496030 FBLN1P23142 703 aa16.34■□□□□ 0.21
APTX-233ENST00000496030 PTF1AQ7RTS3 328 aa16.34■□□□□ 0.21
APTX-233ENST00000496030 ARHGEF25Q86VW2 580 aa16.34■□□□□ 0.21
APTX-233ENST00000496030 TCP11L2Q8N4U5 519 aa16.34■□□□□ 0.21
APTX-233ENST00000496030 KCNH5Q8NCM2 988 aa16.34■□□□□ 0.21
APTX-233ENST00000496030 COG3Q96JB2 828 aa16.34■□□□□ 0.21
APTX-233ENST00000496030 EVA1CP58658 441 aa16.33■□□□□ 0.2
APTX-233ENST00000496030 KNSTRNQ9Y448 316 aa16.33■□□□□ 0.2
APTX-233ENST00000496030 ZNF316A6NFI3 1004 aaPredicted RBP16.32■□□□□ 0.2
APTX-233ENST00000496030 SOX12O15370 315 aa16.32■□□□□ 0.2
APTX-233ENST00000496030 COL18A1P39060 1754 aa16.32■□□□□ 0.2
APTX-233ENST00000496030 ATF5Q9Y2D1 282 aaPredicted RBP16.32■□□□□ 0.2
APTX-233ENST00000496030 FHDC1Q9C0D6 1143 aaPredicted RBP16.31■□□□□ 0.2
APTX-233ENST00000496030 LRRC37A3O60309 1634 aa16.3■□□□□ 0.2
APTX-233ENST00000496030 AATKQ6ZMQ8 1374 aa16.3■□□□□ 0.2
APTX-233ENST00000496030 PLSCR1O15162 318 aa16.3■□□□□ 0.2
APTX-233ENST00000496030 DDX10Q13206 875 aaKnown RBP16.3■□□□□ 0.2
APTX-233ENST00000496030 PROM2Q8N271 834 aa16.3■□□□□ 0.2
APTX-233ENST00000496030 SYT17Q9BSW7 474 aa16.3■□□□□ 0.2
APTX-233ENST00000496030 AXIN2Q9Y2T1 843 aa16.3■□□□□ 0.2
APTX-233ENST00000496030 ANKRD26Q9UPS8 1709 aa16.3■□□□□ 0.2
APTX-233ENST00000496030 OVOS2A0A0G2JMS6 1433 aa16.29■□□□□ 0.2
APTX-233ENST00000496030 NSD2O96028 1365 aa16.29■□□□□ 0.2
APTX-233ENST00000496030 NPC1L1Q9UHC9 1359 aa16.29■□□□□ 0.2
APTX-233ENST00000496030 MAP3K19Q56UN5 1328 aa16.27■□□□□ 0.2
APTX-233ENST00000496030 BCL11BQ9C0K0 894 aaPredicted RBP16.27■□□□□ 0.2
APTX-233ENST00000496030 THRAP3Q9Y2W1 955 aaKnown RBP16.27■□□□□ 0.2
APTX-233ENST00000496030 LTN1O94822 1766 aa16.27■□□□□ 0.2
APTX-233ENST00000496030 COL5A2P05997 1499 aaPredicted RBP16.27■□□□□ 0.19
APTX-233ENST00000496030 RRS1Q15050 365 aaKnown RBP16.26■□□□□ 0.19
APTX-233ENST00000496030 RGPD5Q99666 1765 aa16.26■□□□□ 0.19
APTX-233ENST00000496030 ZBTB7CA1YPR0 619 aa16.25■□□□□ 0.19
APTX-233ENST00000496030 SGIP1Q9BQI5 828 aa16.25■□□□□ 0.19
APTX-233ENST00000496030 GOLGB1Q14789 3259 aaKnown RBP16.25■□□□□ 0.19
APTX-233ENST00000496030 CC2D1BQ5T0F9 858 aaKnown RBP16.24■□□□□ 0.19
APTX-233ENST00000496030 MORC1Q86VD1 984 aa16.24■□□□□ 0.19
APTX-233ENST00000496030 IP6K1Q92551 441 aa16.24■□□□□ 0.19
APTX-233ENST00000496030 POLKQ9UBT6 870 aa16.24■□□□□ 0.19
APTX-233ENST00000496030 MAP2P11137 1827 aaKnown RBP16.24■□□□□ 0.19
APTX-233ENST00000496030 WNK3Q9BYP7 1800 aa16.24■□□□□ 0.19
APTX-233ENST00000496030 TNNT2P45379 298 aaPredicted RBP16.23■□□□□ 0.19
APTX-233ENST00000496030 EMILIN1Q9Y6C2 1016 aa16.23■□□□□ 0.19
APTX-233ENST00000496030 ABCC6O95255 1503 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms