RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 MAP3K19Q56UN5 1328 aa11.97□□□□□ -0.49
GAPVD1-219ENST00000495955 TMPOP42166 694 aaKnown RBP11.97□□□□□ -0.49
GAPVD1-219ENST00000495955 EIF4A2Q14240 407 aaKnown RBP11.97□□□□□ -0.49
GAPVD1-219ENST00000495955 DCTN1Q14203 1278 aa11.97□□□□□ -0.49
GAPVD1-219ENST00000495955 HDAC5Q9UQL6 1122 aa11.97□□□□□ -0.49
GAPVD1-219ENST00000495955 IP6K1Q92551 441 aa11.96□□□□□ -0.49
GAPVD1-219ENST00000495955 PRR36Q9H6K5 1346 aa11.96□□□□□ -0.49
GAPVD1-219ENST00000495955 TSR2Q969E8 191 aaKnown RBP11.96□□□□□ -0.49
GAPVD1-219ENST00000495955 DDB1Q16531 1140 aa11.96□□□□□ -0.49
GAPVD1-219ENST00000495955 USP21Q9UK80 565 aa11.96□□□□□ -0.49
GAPVD1-219ENST00000495955 RIC3Q7Z5B4 369 aa11.96□□□□□ -0.5
GAPVD1-219ENST00000495955 IFNL2Q8IZJ0 200 aa11.96□□□□□ -0.5
GAPVD1-219ENST00000495955 ZCRB1Q8TBF4 217 aaKnown RBP11.96□□□□□ -0.5
GAPVD1-219ENST00000495955 THUMPD2Q9BTF0 503 aaKnown RBP11.96□□□□□ -0.5
GAPVD1-219ENST00000495955 UPF2Q9HAU5 1272 aaKnown RBP11.96□□□□□ -0.5
GAPVD1-219ENST00000495955 SBNO2Q9Y2G9 1366 aa11.96□□□□□ -0.5
GAPVD1-219ENST00000495955 DEPDC5O75140 1603 aa11.96□□□□□ -0.5
GAPVD1-219ENST00000495955 ADGRL3Q9HAR2 1447 aa11.95□□□□□ -0.5
GAPVD1-219ENST00000495955 PTCD1O75127 700 aaKnown RBP11.95□□□□□ -0.5
GAPVD1-219ENST00000495955 MIS18AQ9NYP9 233 aa11.95□□□□□ -0.5
GAPVD1-219ENST00000495955 IL2RBP14784 551 aa11.95□□□□□ -0.5
GAPVD1-219ENST00000495955 NEXMIFQ5QGS0 1516 aa11.95□□□□□ -0.5
GAPVD1-219ENST00000495955 ZKSCAN2Q63HK3 967 aa11.95□□□□□ -0.5
GAPVD1-219ENST00000495955 CCDC30Q5VVM6 783 aa11.95□□□□□ -0.5
GAPVD1-219ENST00000495955 BCORL1Q5H9F3 1711 aa11.94□□□□□ -0.5
GAPVD1-219ENST00000495955 KDM5AP29375 1690 aaKnown RBP11.94□□□□□ -0.5
GAPVD1-219ENST00000495955 EXOSC9Q06265 439 aaKnown RBP11.94□□□□□ -0.5
GAPVD1-219ENST00000495955 CDCA7LQ96GN5 454 aa11.94□□□□□ -0.5
GAPVD1-219ENST00000495955 C9orf78Q9NZ63 289 aaPredicted RBP11.94□□□□□ -0.5
GAPVD1-219ENST00000495955 VWDEQ8N2E2 1590 aa11.94□□□□□ -0.5
GAPVD1-219ENST00000495955 TWISTNBQ3B726 338 aaPredicted RBP11.94□□□□□ -0.5
GAPVD1-219ENST00000495955 KIF6Q6ZMV9 814 aa11.93□□□□□ -0.5
GAPVD1-219ENST00000495955 AEBP1Q8IUX7 1158 aa11.93□□□□□ -0.5
GAPVD1-219ENST00000495955 PLIN1O60240 522 aa11.93□□□□□ -0.5
GAPVD1-219ENST00000495955 ACSBG1Q96GR2 724 aa11.93□□□□□ -0.5
GAPVD1-219ENST00000495955 HDGFL1Q5TGJ6 251 aa11.93□□□□□ -0.5
GAPVD1-219ENST00000495955 ADAMTS13Q76LX8 1427 aa11.92□□□□□ -0.5
GAPVD1-219ENST00000495955 MYL6BP14649 208 aa11.92□□□□□ -0.5
GAPVD1-219ENST00000495955 FAM177BA6PVY3 158 aa11.92□□□□□ -0.5
GAPVD1-219ENST00000495955 SETD1BQ9UPS6 1966 aaKnown RBP11.92□□□□□ -0.5
GAPVD1-219ENST00000495955 EYA1Q99502 592 aa11.92□□□□□ -0.5
GAPVD1-219ENST00000495955 MROH1Q8NDA8 1641 aa11.92□□□□□ -0.5
GAPVD1-219ENST00000495955 G3V3G9 751 aa11.91□□□□□ -0.5
GAPVD1-219ENST00000495955 PER1O15534 1290 aaPredicted RBP11.91□□□□□ -0.5
GAPVD1-219ENST00000495955 RGS3P49796 1198 aa11.91□□□□□ -0.5
GAPVD1-219ENST00000495955 DCAF8Q5TAQ9 597 aa11.91□□□□□ -0.5
GAPVD1-219ENST00000495955 FAM98CQ17RN3 349 aaKnown RBP11.91□□□□□ -0.5
GAPVD1-219ENST00000495955 WDR63Q8IWG1 891 aa11.91□□□□□ -0.5
GAPVD1-219ENST00000495955 API5Q9BZZ5 524 aaKnown RBP11.91□□□□□ -0.5
GAPVD1-219ENST00000495955 SBNO1A3KN83 1393 aa11.91□□□□□ -0.5
GAPVD1-219ENST00000495955 TAF7Q15545 349 aaPredicted RBP11.91□□□□□ -0.5
GAPVD1-219ENST00000495955 PPP4R2Q9NY27 417 aa11.91□□□□□ -0.5
GAPVD1-219ENST00000495955 ANKARQ7Z5J8 1434 aa11.9□□□□□ -0.5
GAPVD1-219ENST00000495955 HMMRO75330 724 aa11.9□□□□□ -0.5
GAPVD1-219ENST00000495955 WWC1Q8IX03 1113 aa11.9□□□□□ -0.5
GAPVD1-219ENST00000495955 STARD3NLO95772 234 aa11.9□□□□□ -0.5
GAPVD1-219ENST00000495955 GORABQ5T7V8 394 aa11.9□□□□□ -0.5
GAPVD1-219ENST00000495955 USP6P35125 1406 aa11.9□□□□□ -0.51
GAPVD1-219ENST00000495955 TRPM1Q7Z4N2 1603 aa11.9□□□□□ -0.51
GAPVD1-219ENST00000495955 B4GALNT3Q6L9W6 998 aa11.9□□□□□ -0.51
GAPVD1-219ENST00000495955 PPP1R1BQ9UD71 204 aaPredicted RBP11.89□□□□□ -0.51
GAPVD1-219ENST00000495955 PARD3Q8TEW0 1356 aa11.89□□□□□ -0.51
GAPVD1-219ENST00000495955 ATP7BP35670 1465 aa11.89□□□□□ -0.51
GAPVD1-219ENST00000495955 FAM83GA6ND36 823 aa11.89□□□□□ -0.51
GAPVD1-219ENST00000495955 CASC1Q6TDU7 716 aa11.89□□□□□ -0.51
GAPVD1-219ENST00000495955 PTCH1Q13635 1447 aa11.89□□□□□ -0.51
GAPVD1-219ENST00000495955 KIF16BQ96L93 1317 aa11.89□□□□□ -0.51
GAPVD1-219ENST00000495955 SLC4A2P04920 1241 aa11.89□□□□□ -0.51
GAPVD1-219ENST00000495955 RWDD1Q9H446 243 aaPredicted RBP11.88□□□□□ -0.51
GAPVD1-219ENST00000495955 TMEM131LA2VDJ0 1609 aa11.88□□□□□ -0.51
GAPVD1-219ENST00000495955 LAMC1P11047 1609 aa11.88□□□□□ -0.51
GAPVD1-219ENST00000495955 C3P01024 1663 aa11.88□□□□□ -0.51
GAPVD1-219ENST00000495955 COG6Q9Y2V7 657 aa11.88□□□□□ -0.51
GAPVD1-219ENST00000495955 KIAA0232Q92628 1395 aa11.88□□□□□ -0.51
GAPVD1-219ENST00000495955 DZIP1LQ8IYY4 767 aaKnown RBP11.87□□□□□ -0.51
GAPVD1-219ENST00000495955 HMGB2P26583 209 aaKnown RBP11.87□□□□□ -0.51
GAPVD1-219ENST00000495955 CDCA7Q9BWT1 371 aaPredicted RBP11.87□□□□□ -0.51
GAPVD1-219ENST00000495955 PTPRUQ92729 1446 aa11.87□□□□□ -0.51
GAPVD1-219ENST00000495955 ZNF428Q96B54 188 aa11.86□□□□□ -0.51
GAPVD1-219ENST00000495955 SPATA31A3Q5VYP0 1347 aa11.86□□□□□ -0.51
GAPVD1-219ENST00000495955 MTHFSDQ2M296 383 aaKnown RBP11.86□□□□□ -0.51
GAPVD1-219ENST00000495955 AKAP4Q5JQC9 854 aa11.86□□□□□ -0.51
GAPVD1-219ENST00000495955 QTRT2Q9H974 415 aaKnown RBP11.86□□□□□ -0.51
GAPVD1-219ENST00000495955 SETBP1Q9Y6X0 1596 aa11.86□□□□□ -0.51
GAPVD1-219ENST00000495955 MYO3AQ8NEV4 1616 aa11.86□□□□□ -0.51
GAPVD1-219ENST00000495955 POLR3AO14802 1390 aaPredicted RBP11.86□□□□□ -0.51
GAPVD1-219ENST00000495955 IFT57Q9NWB7 429 aa11.86□□□□□ -0.51
GAPVD1-219ENST00000495955 PCDH11XQ9BZA7 1347 aa11.86□□□□□ -0.51
GAPVD1-219ENST00000495955 PCDH11YQ9BZA8 1340 aa11.86□□□□□ -0.51
GAPVD1-219ENST00000495955 RRP1P56182 461 aaKnown RBP11.85□□□□□ -0.51
GAPVD1-219ENST00000495955 FMNL2Q96PY5 1086 aa11.85□□□□□ -0.51
GAPVD1-219ENST00000495955 BCL11BQ9C0K0 894 aaPredicted RBP11.85□□□□□ -0.51
GAPVD1-219ENST00000495955 FRAT2O75474 233 aaPredicted RBP11.85□□□□□ -0.51
GAPVD1-219ENST00000495955 NBPF6Q5VWK0 638 aa11.85□□□□□ -0.51
GAPVD1-219ENST00000495955 DUSP27Q5VZP5 1158 aa11.85□□□□□ -0.51
GAPVD1-219ENST00000495955 NBPF4Q96M43 638 aa11.85□□□□□ -0.51
GAPVD1-219ENST00000495955 C1orf167Q5SNV9 1468 aa11.85□□□□□ -0.51
GAPVD1-219ENST00000495955 LARP1Q6PKG0 1096 aaKnown RBP11.85□□□□□ -0.51
GAPVD1-219ENST00000495955 BICDL1Q6ZP65 573 aa11.85□□□□□ -0.51
GAPVD1-219ENST00000495955 MROH2AA6NES4 1674 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms