RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 PHACTR3Q96KR7 559 aa18.93■□□□□ 0.62
CHTOP-206ENST00000495554 TNNQ9UQP3 1299 aa18.93■□□□□ 0.62
CHTOP-206ENST00000495554 HMOX1P09601 288 aa18.92■□□□□ 0.62
CHTOP-206ENST00000495554 DIP2AQ14689 1571 aa18.92■□□□□ 0.62
CHTOP-206ENST00000495554 USP6P35125 1406 aa18.92■□□□□ 0.62
CHTOP-206ENST00000495554 NRKQ7Z2Y5 1582 aa18.92■□□□□ 0.62
CHTOP-206ENST00000495554 MVPQ14764 893 aaKnown RBP18.91■□□□□ 0.62
CHTOP-206ENST00000495554 SMC4Q9NTJ3 1288 aa18.91■□□□□ 0.62
CHTOP-206ENST00000495554 SSH2Q76I76 1423 aa18.91■□□□□ 0.62
CHTOP-206ENST00000495554 FTSJ3Q8IY81 847 aaKnown RBP18.91■□□□□ 0.62
CHTOP-206ENST00000495554 DZIP1LQ8IYY4 767 aaKnown RBP18.91■□□□□ 0.62
CHTOP-206ENST00000495554 CEP170BQ9Y4F5 1589 aaPredicted RBP18.91■□□□□ 0.62
CHTOP-206ENST00000495554 PCDHB15Q9Y5E8 787 aa18.9■□□□□ 0.62
CHTOP-206ENST00000495554 KCNA6P17658 529 aa18.89■□□□□ 0.62
CHTOP-206ENST00000495554 XRN1Q8IZH2 1706 aaKnown RBP18.89■□□□□ 0.61
CHTOP-206ENST00000495554 OVOS2A0A0J9YW53 1432 aa18.89■□□□□ 0.61
CHTOP-206ENST00000495554 OVOS2Q6IE36 1432 aa18.89■□□□□ 0.61
CHTOP-206ENST00000495554 NBR1Q14596 966 aa18.89■□□□□ 0.61
CHTOP-206ENST00000495554 SSH1Q8WYL5 1049 aa18.89■□□□□ 0.61
CHTOP-206ENST00000495554 RIMS1Q86UR5 1692 aaKnown RBP18.89■□□□□ 0.61
CHTOP-206ENST00000495554 RWDD1Q9H446 243 aaPredicted RBP18.88■□□□□ 0.61
CHTOP-206ENST00000495554 NFE2L2Q16236 605 aa18.87■□□□□ 0.61
CHTOP-206ENST00000495554 PIK3R4Q99570 1358 aa18.86■□□□□ 0.61
CHTOP-206ENST00000495554 TRIM27P14373 513 aa18.86■□□□□ 0.61
CHTOP-206ENST00000495554 ATF7IPQ6VMQ6 1270 aa18.86■□□□□ 0.61
CHTOP-206ENST00000495554 RGPD8O14715 1765 aaPredicted RBP18.86■□□□□ 0.61
CHTOP-206ENST00000495554 CALD1Q05682 793 aaKnown RBP18.86■□□□□ 0.61
CHTOP-206ENST00000495554 USP31Q70CQ4 1352 aa18.85■□□□□ 0.61
CHTOP-206ENST00000495554 ZNF428Q96B54 188 aa18.85■□□□□ 0.61
CHTOP-206ENST00000495554 KIF16BQ96L93 1317 aa18.84■□□□□ 0.61
CHTOP-206ENST00000495554 PDIA4P13667 645 aaKnown RBP18.84■□□□□ 0.61
CHTOP-206ENST00000495554 ALDH1L2Q3SY69 923 aa18.84■□□□□ 0.61
CHTOP-206ENST00000495554 DDX19BQ9UMR2 479 aa18.84■□□□□ 0.61
CHTOP-206ENST00000495554 IPO8O15397 1037 aaKnown RBP18.84■□□□□ 0.61
CHTOP-206ENST00000495554 EIF4A2Q14240 407 aaKnown RBP18.84■□□□□ 0.61
CHTOP-206ENST00000495554 ANKLE2Q86XL3 938 aa18.83■□□□□ 0.6
CHTOP-206ENST00000495554 NOB1Q9ULX3 412 aaKnown RBP18.83■□□□□ 0.6
CHTOP-206ENST00000495554 ADAMTSL3P82987 1691 aa18.83■□□□□ 0.6
CHTOP-206ENST00000495554 THUMPD2Q9BTF0 503 aaKnown RBP18.82■□□□□ 0.6
CHTOP-206ENST00000495554 TTC21AQ8NDW8 1320 aa18.82■□□□□ 0.6
CHTOP-206ENST00000495554 NALCNQ8IZF0 1738 aa18.82■□□□□ 0.6
CHTOP-206ENST00000495554 NGDNQ8NEJ9 315 aaKnown RBP18.82■□□□□ 0.6
CHTOP-206ENST00000495554 HSP90AB2PQ58FF8 381 aa18.81■□□□□ 0.6
CHTOP-206ENST00000495554 RTL5Q5HYW3 569 aaPredicted RBP18.81■□□□□ 0.6
CHTOP-206ENST00000495554 ITPRIPQ8IWB1 547 aa18.81■□□□□ 0.6
CHTOP-206ENST00000495554 PDZRN3Q9UPQ7 1066 aa18.81■□□□□ 0.6
CHTOP-206ENST00000495554 BRPF1P55201 1214 aaPredicted RBP18.8■□□□□ 0.6
CHTOP-206ENST00000495554 PEAK1Q9H792 1746 aa18.8■□□□□ 0.6
CHTOP-206ENST00000495554 AEBP1Q8IUX7 1158 aa18.8■□□□□ 0.6
CHTOP-206ENST00000495554 GNAI1P63096 354 aa18.79■□□□□ 0.6
CHTOP-206ENST00000495554 LMOD3Q0VAK6 560 aa18.79■□□□□ 0.6
CHTOP-206ENST00000495554 IFT57Q9NWB7 429 aa18.79■□□□□ 0.6
CHTOP-206ENST00000495554 SETD1BQ9UPS6 1966 aaKnown RBP18.79■□□□□ 0.6
CHTOP-206ENST00000495554 ZNF853P0CG23 659 aa18.79■□□□□ 0.6
CHTOP-206ENST00000495554 LAS1LQ9Y4W2 734 aaKnown RBP18.79■□□□□ 0.6
CHTOP-206ENST00000495554 ANKARQ7Z5J8 1434 aa18.78■□□□□ 0.6
CHTOP-206ENST00000495554 PDE4CQ08493 712 aa18.78■□□□□ 0.6
CHTOP-206ENST00000495554 HDAC1Q13547 482 aaPredicted RBP18.78■□□□□ 0.6
CHTOP-206ENST00000495554 ZNF142P52746 1687 aaPredicted RBP18.78■□□□□ 0.6
CHTOP-206ENST00000495554 CHD2O14647 1828 aaKnown RBP18.78■□□□□ 0.6
CHTOP-206ENST00000495554 SOX12O15370 315 aa18.77■□□□□ 0.6
CHTOP-206ENST00000495554 SULT6B1Q6IMI4 303 aa18.77■□□□□ 0.6
CHTOP-206ENST00000495554 DLG5Q8TDM6 1919 aa18.77■□□□□ 0.6
CHTOP-206ENST00000495554 MAP3K19Q56UN5 1328 aa18.77■□□□□ 0.59
CHTOP-206ENST00000495554 VIRMAQ69YN4 1812 aaKnown RBP18.77■□□□□ 0.59
CHTOP-206ENST00000495554 AEBP2Q6ZN18 517 aaPredicted RBP18.77■□□□□ 0.59
CHTOP-206ENST00000495554 TMEM57Q8N5G2 664 aa18.77■□□□□ 0.59
CHTOP-206ENST00000495554 FAM83GA6ND36 823 aa18.76■□□□□ 0.59
CHTOP-206ENST00000495554 USP35Q9P2H5 1018 aa18.76■□□□□ 0.59
CHTOP-206ENST00000495554 FMN2Q9NZ56 1722 aa18.75■□□□□ 0.59
CHTOP-206ENST00000495554 RBM33Q96EV2 1170 aaKnown RBP18.75■□□□□ 0.59
CHTOP-206ENST00000495554 ZBTB40Q9NUA8 1239 aa18.75■□□□□ 0.59
CHTOP-206ENST00000495554 VAMP4O75379 141 aa18.75■□□□□ 0.59
CHTOP-206ENST00000495554 TSPYL6Q8N831 410 aa18.74■□□□□ 0.59
CHTOP-206ENST00000495554 CFAP44Q96MT7 982 aa18.74■□□□□ 0.59
CHTOP-206ENST00000495554 MBIPQ9NS73 344 aa18.74■□□□□ 0.59
CHTOP-206ENST00000495554 PIK3C2AO00443 1686 aa18.74■□□□□ 0.59
CHTOP-206ENST00000495554 DCTN1Q14203 1278 aa18.73■□□□□ 0.59
CHTOP-206ENST00000495554 ARHGAP45Q92619 1136 aa18.73■□□□□ 0.59
CHTOP-206ENST00000495554 RGPD1P0DJD0 1748 aa18.73■□□□□ 0.59
CHTOP-206ENST00000495554 USP19O94966 1318 aa18.73■□□□□ 0.59
CHTOP-206ENST00000495554 DEKP35659 375 aaKnown RBP18.72■□□□□ 0.59
CHTOP-206ENST00000495554 NLRP6P59044 892 aa18.72■□□□□ 0.59
CHTOP-206ENST00000495554 SEC24BO95487 1268 aa18.71■□□□□ 0.59
CHTOP-206ENST00000495554 SLC4A3P48751 1232 aa18.71■□□□□ 0.59
CHTOP-206ENST00000495554 SBNO1A3KN83 1393 aa18.71■□□□□ 0.59
CHTOP-206ENST00000495554 SMC5Q8IY18 1101 aa18.71■□□□□ 0.59
CHTOP-206ENST00000495554 MRPL50Q8N5N7 158 aaKnown RBP18.71■□□□□ 0.59
CHTOP-206ENST00000495554 CHMP4BQ9H444 224 aaKnown RBP18.71■□□□□ 0.59
CHTOP-206ENST00000495554 DNAJC5Q9H3Z4 198 aa18.7■□□□□ 0.58
CHTOP-206ENST00000495554 FLT4P35916 1363 aa18.7■□□□□ 0.58
CHTOP-206ENST00000495554 NUTM2GQ5VZR2 741 aa18.69■□□□□ 0.58
CHTOP-206ENST00000495554 UPF2Q9HAU5 1272 aaKnown RBP18.69■□□□□ 0.58
CHTOP-206ENST00000495554 TWISTNBQ3B726 338 aaPredicted RBP18.69■□□□□ 0.58
CHTOP-206ENST00000495554 C8orf58Q8NAV2 365 aa18.69■□□□□ 0.58
CHTOP-206ENST00000495554 PHF8Q9UPP1 1060 aa18.69■□□□□ 0.58
CHTOP-206ENST00000495554 MARF1Q9Y4F3 1742 aaKnown RBP18.68■□□□□ 0.58
CHTOP-206ENST00000495554 ELL2O00472 640 aaPredicted RBP18.68■□□□□ 0.58
CHTOP-206ENST00000495554 NPHP4O75161 1426 aaPredicted RBP18.67■□□□□ 0.58
CHTOP-206ENST00000495554 AMPHP49418 695 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms