RNA–Protein interactions for RNA: ENST00000494397.5

ARHGAP4-223, Transcript of Rho GTPase activating protein 4, human

TSL 5

Gene ARHGAP4, Length 1,752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP4-223	ENST00000494397	TSR2	Q969E8	191 aa	Known RBP	29.11	■■■□□ 2.25
ARHGAP4-223	ENST00000494397	SOX12	O15370	315 aa		29.09	■■■□□ 2.25
ARHGAP4-223	ENST00000494397	ABTB2	Q8N961	1025 aa		29.09	■■■□□ 2.25
ARHGAP4-223	ENST00000494397	CANX	P27824	592 aa	Known RBP	29.08	■■■□□ 2.25
ARHGAP4-223	ENST00000494397	PROSER2	Q86WR7	435 aa	Predicted RBP	29.08	■■■□□ 2.25
ARHGAP4-223	ENST00000494397	ARHGEF10	O15013	1369 aa		29.08	■■■□□ 2.25
ARHGAP4-223	ENST00000494397	ESCO1	Q5FWF5	840 aa		29.08	■■■□□ 2.25
ARHGAP4-223	ENST00000494397	RGPD1	P0DJD0	1748 aa		29.07	■■■□□ 2.24
ARHGAP4-223	ENST00000494397	EXOSC9	Q06265	439 aa	Known RBP	29.07	■■■□□ 2.24
ARHGAP4-223	ENST00000494397	SULT6B1	Q6IMI4	303 aa		29.07	■■■□□ 2.24
ARHGAP4-223	ENST00000494397	PAK3	O75914	559 aa	Predicted RBP	29.06	■■■□□ 2.24
ARHGAP4-223	ENST00000494397	AMPH	P49418	695 aa		29.06	■■■□□ 2.24
ARHGAP4-223	ENST00000494397	MARF1	Q9Y4F3	1742 aa	Known RBP	29.04	■■■□□ 2.24
ARHGAP4-223	ENST00000494397	AEBP1	Q8IUX7	1158 aa		29.04	■■■□□ 2.24
ARHGAP4-223	ENST00000494397	PSME1	Q06323	249 aa		29.03	■■■□□ 2.24
ARHGAP4-223	ENST00000494397	IFT57	Q9NWB7	429 aa		29.02	■■■□□ 2.24
ARHGAP4-223	ENST00000494397	RBM19	Q9Y4C8	960 aa	Known RBP	29.02	■■■□□ 2.24
ARHGAP4-223	ENST00000494397	FRAT1	Q92837	279 aa	Predicted RBP	29.01	■■■□□ 2.23
ARHGAP4-223	ENST00000494397	GNAI1	P63096	354 aa		29.01	■■■□□ 2.23
ARHGAP4-223	ENST00000494397	NUTM2G	Q5VZR2	741 aa		29.01	■■■□□ 2.23
ARHGAP4-223	ENST00000494397	C19orf44	Q9H6X5	657 aa		29.01	■■■□□ 2.23
ARHGAP4-223	ENST00000494397	RTL1	A6NKG5	1358 aa		29	■■■□□ 2.23
ARHGAP4-223	ENST00000494397	NCOA3	Q9Y6Q9	1424 aa		29	■■■□□ 2.23
ARHGAP4-223	ENST00000494397	KDR	P35968	1356 aa		28.99	■■■□□ 2.23
ARHGAP4-223	ENST00000494397	ZNF853	P0CG23	659 aa		28.98	■■■□□ 2.23
ARHGAP4-223	ENST00000494397	IGSF1	Q8N6C5	1336 aa		28.98	■■■□□ 2.23
ARHGAP4-223	ENST00000494397	HOXC9	P31274	260 aa		28.98	■■■□□ 2.23
ARHGAP4-223	ENST00000494397	ZNF428	Q96B54	188 aa		28.98	■■■□□ 2.23
ARHGAP4-223	ENST00000494397	BCL2L13	Q9BXK5	485 aa		28.98	■■■□□ 2.23
ARHGAP4-223	ENST00000494397	KDM2B	Q8NHM5	1336 aa		28.98	■■■□□ 2.23
ARHGAP4-223	ENST00000494397	AAMP	Q13685	434 aa		28.97	■■■□□ 2.23
ARHGAP4-223	ENST00000494397	ORAI2	Q96SN7	254 aa		28.97	■■■□□ 2.23
ARHGAP4-223	ENST00000494397	PANK1	Q8TE04	598 aa		28.96	■■■□□ 2.23
ARHGAP4-223	ENST00000494397	THUMPD2	Q9BTF0	503 aa	Known RBP	28.96	■■■□□ 2.23
ARHGAP4-223	ENST00000494397	C1orf167	Q5SNV9	1468 aa		28.96	■■■□□ 2.23
ARHGAP4-223	ENST00000494397	CENPQ	Q7L2Z9	268 aa	Predicted RBP	28.96	■■■□□ 2.23
ARHGAP4-223	ENST00000494397	SMC4	Q9NTJ3	1288 aa		28.96	■■■□□ 2.23
ARHGAP4-223	ENST00000494397	MS4A1	P11836	297 aa		28.95	■■■□□ 2.22
ARHGAP4-223	ENST00000494397	ZKSCAN2	Q63HK3	967 aa		28.95	■■■□□ 2.22
ARHGAP4-223	ENST00000494397	CFAP44	Q96MT7	982 aa		28.95	■■■□□ 2.22
ARHGAP4-223	ENST00000494397	DCC	P43146	1447 aa		28.95	■■■□□ 2.22
ARHGAP4-223	ENST00000494397	ALDH1L2	Q3SY69	923 aa		28.94	■■■□□ 2.22
ARHGAP4-223	ENST00000494397	NFAT5	O94916	1531 aa		28.93	■■■□□ 2.22
ARHGAP4-223	ENST00000494397	KCNH5	Q8NCM2	988 aa		28.93	■■■□□ 2.22
ARHGAP4-223	ENST00000494397	SSH1	Q8WYL5	1049 aa		28.93	■■■□□ 2.22
ARHGAP4-223	ENST00000494397	EYA1	Q99502	592 aa		28.93	■■■□□ 2.22
ARHGAP4-223	ENST00000494397	LAS1L	Q9Y4W2	734 aa	Known RBP	28.93	■■■□□ 2.22
ARHGAP4-223	ENST00000494397	TMEM94	Q12767	1356 aa		28.93	■■■□□ 2.22
ARHGAP4-223	ENST00000494397	MYT1	Q01538	1121 aa		28.93	■■■□□ 2.22
ARHGAP4-223	ENST00000494397	COG6	Q9Y2V7	657 aa		28.93	■■■□□ 2.22
ARHGAP4-223	ENST00000494397	KIF1A	Q12756	1690 aa		28.92	■■■□□ 2.22
ARHGAP4-223	ENST00000494397	TCERG1	O14776	1098 aa	Known RBP	28.9	■■■□□ 2.22
ARHGAP4-223	ENST00000494397	FOXO3	O43524	673 aa		28.9	■■■□□ 2.22
ARHGAP4-223	ENST00000494397	MBIP	Q9NS73	344 aa		28.9	■■■□□ 2.22
ARHGAP4-223	ENST00000494397	CLUAP1	Q96AJ1	413 aa		28.9	■■■□□ 2.22
ARHGAP4-223	ENST00000494397	FAM83G	A6ND36	823 aa		28.89	■■■□□ 2.22
ARHGAP4-223	ENST00000494397	HSPA2	P54652	639 aa		28.89	■■■□□ 2.22
ARHGAP4-223	ENST00000494397	DLG5	Q8TDM6	1919 aa		28.89	■■■□□ 2.22
ARHGAP4-223	ENST00000494397	KIF16B	Q96L93	1317 aa		28.89	■■■□□ 2.21
ARHGAP4-223	ENST00000494397	RLBP1	P12271	317 aa		28.88	■■■□□ 2.21
ARHGAP4-223	ENST00000494397	ATF3	P18847	181 aa		28.88	■■■□□ 2.21
ARHGAP4-223	ENST00000494397	BRPF1	P55201	1214 aa	Predicted RBP	28.88	■■■□□ 2.21
ARHGAP4-223	ENST00000494397	IP6K1	Q92551	441 aa		28.88	■■■□□ 2.21
ARHGAP4-223	ENST00000494397	MST1R	Q04912	1400 aa		28.87	■■■□□ 2.21
ARHGAP4-223	ENST00000494397	DZIP1L	Q8IYY4	767 aa	Known RBP	28.87	■■■□□ 2.21
ARHGAP4-223	ENST00000494397	SLIT3	O75094	1523 aa		28.86	■■■□□ 2.21
ARHGAP4-223	ENST00000494397	KDM4F	A0A1W2PPD8	638 aa		28.85	■■■□□ 2.21
ARHGAP4-223	ENST00000494397	VAMP4	O75379	141 aa		28.85	■■■□□ 2.21
ARHGAP4-223	ENST00000494397	DCTN1	Q14203	1278 aa		28.85	■■■□□ 2.21
ARHGAP4-223	ENST00000494397	FTSJ3	Q8IY81	847 aa	Known RBP	28.85	■■■□□ 2.21
ARHGAP4-223	ENST00000494397	GAS2L2	Q8NHY3	880 aa		28.85	■■■□□ 2.21
ARHGAP4-223	ENST00000494397	TNN	Q9UQP3	1299 aa		28.85	■■■□□ 2.21
ARHGAP4-223	ENST00000494397	STRCP1	A6NGW2	1772 aa		28.84	■■■□□ 2.21
ARHGAP4-223	ENST00000494397	LMTK3	Q96Q04	1460 aa		28.84	■■■□□ 2.21
ARHGAP4-223	ENST00000494397	IPO8	O15397	1037 aa	Known RBP	28.84	■■■□□ 2.21
ARHGAP4-223	ENST00000494397	ATF7IP	Q6VMQ6	1270 aa		28.84	■■■□□ 2.21
ARHGAP4-223	ENST00000494397	KRT28	Q7Z3Y7	464 aa		28.84	■■■□□ 2.21
ARHGAP4-223	ENST00000494397	PHRF1	Q9P1Y6	1649 aa	Known RBP	28.83	■■■□□ 2.21
ARHGAP4-223	ENST00000494397	MVP	Q14764	893 aa	Known RBP	28.83	■■■□□ 2.21
ARHGAP4-223	ENST00000494397	MTHFSD	Q2M296	383 aa	Known RBP	28.83	■■■□□ 2.21
ARHGAP4-223	ENST00000494397	TRPM3	Q9HCF6	1732 aa	Predicted RBP	28.83	■■■□□ 2.21
ARHGAP4-223	ENST00000494397	USP19	O94966	1318 aa		28.82	■■■□□ 2.2
ARHGAP4-223	ENST00000494397	TRIM27	P14373	513 aa		28.82	■■■□□ 2.2
ARHGAP4-223	ENST00000494397	NOB1	Q9ULX3	412 aa	Known RBP	28.82	■■■□□ 2.2
ARHGAP4-223	ENST00000494397	XPC	Q01831	940 aa	Predicted RBP	28.81	■■■□□ 2.2
ARHGAP4-223	ENST00000494397	CHL1	O00533	1208 aa		28.8	■■■□□ 2.2
ARHGAP4-223	ENST00000494397	CADPS2	Q86UW7	1296 aa		28.8	■■■□□ 2.2
ARHGAP4-223	ENST00000494397	HTATSF1	O43719	755 aa	Known RBP	28.8	■■■□□ 2.2
ARHGAP4-223	ENST00000494397	MCM10	Q7L590	875 aa		28.8	■■■□□ 2.2
ARHGAP4-223	ENST00000494397	LTN1	O94822	1766 aa		28.8	■■■□□ 2.2
ARHGAP4-223	ENST00000494397	CRB1	P82279	1406 aa		28.79	■■■□□ 2.2
ARHGAP4-223	ENST00000494397	GC	P02774	474 aa		28.79	■■■□□ 2.2
ARHGAP4-223	ENST00000494397	TWISTNB	Q3B726	338 aa	Predicted RBP	28.79	■■■□□ 2.2
ARHGAP4-223	ENST00000494397	TSPYL6	Q8N831	410 aa		28.79	■■■□□ 2.2
ARHGAP4-223	ENST00000494397	RTF1	Q92541	710 aa	Known RBP	28.78	■■■□□ 2.2
ARHGAP4-223	ENST00000494397	LTV1	Q96GA3	475 aa	Predicted RBP	28.78	■■■□□ 2.2
ARHGAP4-223	ENST00000494397	HAP1	P54257	671 aa	Predicted RBP	28.77	■■■□□ 2.2
ARHGAP4-223	ENST00000494397	ARHGEF25	Q86VW2	580 aa		28.76	■■■□□ 2.19
ARHGAP4-223	ENST00000494397	C8orf58	Q8NAV2	365 aa		28.76	■■■□□ 2.19
ARHGAP4-223	ENST00000494397	MSH6	P52701	1360 aa		28.76	■■■□□ 2.19

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms