RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 ANKRD36BQ8N2N9 1353 aa15.26■□□□□ 0.03
BRCA1-222ENST00000493919 PLCB2Q00722 1185 aa15.25■□□□□ 0.03
BRCA1-222ENST00000493919 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.25■□□□□ 0.03
BRCA1-222ENST00000493919 GTF2E1P29083 439 aaPredicted RBP15.25■□□□□ 0.03
BRCA1-222ENST00000493919 CNGB1Q14028 1251 aaPredicted RBP15.25■□□□□ 0.03
BRCA1-222ENST00000493919 PHF23Q9BUL5 403 aaPredicted RBP15.25■□□□□ 0.03
BRCA1-222ENST00000493919 TTC21BQ7Z4L5 1316 aa15.25■□□□□ 0.03
BRCA1-222ENST00000493919 BRD4O60885 1362 aaPredicted RBP15.24■□□□□ 0.03
BRCA1-222ENST00000493919 PHRF1Q9P1Y6 1649 aaKnown RBP15.24■□□□□ 0.03
BRCA1-222ENST00000493919 EDC4Q6P2E9 1401 aaKnown RBP15.24■□□□□ 0.03
BRCA1-222ENST00000493919 SSH2Q76I76 1423 aa15.24■□□□□ 0.03
BRCA1-222ENST00000493919 CRYBG1Q9Y4K1 1723 aa15.24■□□□□ 0.03
BRCA1-222ENST00000493919 CALD1Q05682 793 aaKnown RBP15.23■□□□□ 0.03
BRCA1-222ENST00000493919 KIF7Q2M1P5 1343 aa15.23■□□□□ 0.03
BRCA1-222ENST00000493919 IRX6P78412 446 aaPredicted RBP15.23■□□□□ 0.03
BRCA1-222ENST00000493919 HSP90AA2PQ14568 343 aaPredicted RBP15.22■□□□□ 0.03
BRCA1-222ENST00000493919 SECISBP2LQ93073 1101 aaKnown RBP15.22■□□□□ 0.03
BRCA1-222ENST00000493919 C8orf37Q96NL8 207 aa15.22■□□□□ 0.03
BRCA1-222ENST00000493919 MARF1Q9Y4F3 1742 aaKnown RBP15.22■□□□□ 0.03
BRCA1-222ENST00000493919 TTC21AQ8NDW8 1320 aa15.21■□□□□ 0.03
BRCA1-222ENST00000493919 NLRP6P59044 892 aa15.21■□□□□ 0.02
BRCA1-222ENST00000493919 RTL5Q5HYW3 569 aaPredicted RBP15.21■□□□□ 0.02
BRCA1-222ENST00000493919 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.21■□□□□ 0.02
BRCA1-222ENST00000493919 NLRP13Q86W25 1043 aa15.2■□□□□ 0.02
BRCA1-222ENST00000493919 NSD3Q9BZ95 1437 aa15.2■□□□□ 0.02
BRCA1-222ENST00000493919 RNF216Q9NWF9 866 aaPredicted RBP15.2■□□□□ 0.02
BRCA1-222ENST00000493919 CCDC7Q96M83 1385 aa15.19■□□□□ 0.02
BRCA1-222ENST00000493919 NME9Q86XW9 330 aa15.19■□□□□ 0.02
BRCA1-222ENST00000493919 WASHC2AQ641Q2 1341 aa15.19■□□□□ 0.02
BRCA1-222ENST00000493919 SOX12O15370 315 aa15.19■□□□□ 0.02
BRCA1-222ENST00000493919 CLSTN1O94985 981 aa15.19■□□□□ 0.02
BRCA1-222ENST00000493919 KIF20BQ96Q89 1820 aa15.18■□□□□ 0.02
BRCA1-222ENST00000493919 USP19O94966 1318 aa15.18■□□□□ 0.02
BRCA1-222ENST00000493919 IGSF3O75054 1194 aa15.17■□□□□ 0.02
BRCA1-222ENST00000493919 NGLY1Q96IV0 654 aa15.17■□□□□ 0.02
BRCA1-222ENST00000493919 ZRANB1Q9UGI0 708 aa15.17■□□□□ 0.02
BRCA1-222ENST00000493919 SLIT3O75094 1523 aa15.17■□□□□ 0.02
BRCA1-222ENST00000493919 AFF2P51816 1311 aa15.16■□□□□ 0.02
BRCA1-222ENST00000493919 ZBTB7CA1YPR0 619 aa15.16■□□□□ 0.02
BRCA1-222ENST00000493919 ZC3H6P61129 1189 aaKnown RBP15.16■□□□□ 0.02
BRCA1-222ENST00000493919 PRDM4Q9UKN5 801 aa15.16■□□□□ 0.02
BRCA1-222ENST00000493919 PLCH1Q4KWH8 1693 aa15.16■□□□□ 0.02
BRCA1-222ENST00000493919 USP54Q70EL1 1684 aa15.16■□□□□ 0.02
BRCA1-222ENST00000493919 PANK3Q9H999 370 aa15.15■□□□□ 0.02
BRCA1-222ENST00000493919 KIAA0232Q92628 1395 aa15.15■□□□□ 0.02
BRCA1-222ENST00000493919 CARD14Q9BXL6 1004 aa15.15■□□□□ 0.02
BRCA1-222ENST00000493919 PRDM11Q9NQV5 511 aa15.15■□□□□ 0.02
BRCA1-222ENST00000493919 OVOS2A0A0J9YW53 1432 aa15.15■□□□□ 0.02
BRCA1-222ENST00000493919 OVOS2Q6IE36 1432 aa15.15■□□□□ 0.02
BRCA1-222ENST00000493919 GCP02774 474 aa15.14■□□□□ 0.01
BRCA1-222ENST00000493919 CNPY4Q8N129 248 aa15.14■□□□□ 0.01
BRCA1-222ENST00000493919 GGNBP2Q9H3C7 697 aa15.14■□□□□ 0.01
BRCA1-222ENST00000493919 COL14A1Q05707 1796 aaKnown RBP15.13■□□□□ 0.01
BRCA1-222ENST00000493919 CHRNA2Q15822 529 aa15.13■□□□□ 0.01
BRCA1-222ENST00000493919 FAM43AQ8N2R8 423 aa15.13■□□□□ 0.01
BRCA1-222ENST00000493919 COG3Q96JB2 828 aa15.13■□□□□ 0.01
BRCA1-222ENST00000493919 USP31Q70CQ4 1352 aa15.13■□□□□ 0.01
BRCA1-222ENST00000493919 CGNL1Q0VF96 1302 aa15.12■□□□□ 0.01
BRCA1-222ENST00000493919 NFAT5O94916 1531 aa15.12■□□□□ 0.01
BRCA1-222ENST00000493919 USP21Q9UK80 565 aa15.11■□□□□ 0.01
BRCA1-222ENST00000493919 FYB1O15117 783 aa15.11■□□□□ 0.01
BRCA1-222ENST00000493919 KCNH5Q8NCM2 988 aa15.11■□□□□ 0.01
BRCA1-222ENST00000493919 RGS17Q9UGC6 210 aaPredicted RBP15.11■□□□□ 0.01
BRCA1-222ENST00000493919 SLIT2O94813 1529 aa15.11■□□□□ 0.01
BRCA1-222ENST00000493919 NWD2Q9ULI1 1742 aa15.1■□□□□ 0.01
BRCA1-222ENST00000493919 FAM83GA6ND36 823 aa15.1■□□□□ 0.01
BRCA1-222ENST00000493919 ZNF772Q68DY9 489 aaPredicted RBP15.1■□□□□ 0.01
BRCA1-222ENST00000493919 LTN1O94822 1766 aa15.1■□□□□ 0.01
BRCA1-222ENST00000493919 BTG4Q9NY30 223 aa15.09■□□□□ 0.01
BRCA1-222ENST00000493919 KNSTRNQ9Y448 316 aa15.09■□□□□ 0.01
BRCA1-222ENST00000493919 CPDO75976 1380 aa15.09■□□□□ 0.01
BRCA1-222ENST00000493919 PPM1GO15355 546 aaPredicted RBP15.09■□□□□ 0.01
BRCA1-222ENST00000493919 NRAPQ86VF7 1730 aa15.09■□□□□ 0.01
BRCA1-222ENST00000493919 FNBP4Q8N3X1 1017 aaPredicted RBP15.09■□□□□ 0.01
BRCA1-222ENST00000493919 ANKRD26Q9UPS8 1709 aa15.09■□□□□ 0.01
BRCA1-222ENST00000493919 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.08■□□□□ 0.01
BRCA1-222ENST00000493919 BCL9LQ86UU0 1499 aa15.08■□□□□ 0
BRCA1-222ENST00000493919 GRIPAP1Q4V328 841 aa15.07■□□□□ 0
BRCA1-222ENST00000493919 LMO7Q8WWI1 1683 aa15.07■□□□□ 0
BRCA1-222ENST00000493919 POTEAQ6S8J7 498 aa15.07■□□□□ 0
BRCA1-222ENST00000493919 PTMAP06454 111 aaKnown RBP15.06■□□□□ 0
BRCA1-222ENST00000493919 UNC5CLQ8IV45 518 aa15.06■□□□□ 0
BRCA1-222ENST00000493919 FBLN1P23142 703 aa15.05■□□□□ 0
BRCA1-222ENST00000493919 STRN4Q9NRL3 753 aa15.05■□□□□ 0
BRCA1-222ENST00000493919 CAMTA1Q9Y6Y1 1673 aa15.05■□□□□ -0
BRCA1-222ENST00000493919 ARHGEF25Q86VW2 580 aa15.05■□□□□ -0
BRCA1-222ENST00000493919 QTRT2Q9H974 415 aaKnown RBP15.05■□□□□ -0
BRCA1-222ENST00000493919 TRPC5Q9UL62 973 aaPredicted RBP15.05■□□□□ -0
BRCA1-222ENST00000493919 NEFMP07197 916 aa15.04■□□□□ -0
BRCA1-222ENST00000493919 TNNT2P45379 298 aaPredicted RBP15.04■□□□□ -0
BRCA1-222ENST00000493919 NSD2O96028 1365 aa15.04■□□□□ -0
BRCA1-222ENST00000493919 AATKQ6ZMQ8 1374 aa15.04■□□□□ -0
BRCA1-222ENST00000493919 ATRNO75882 1429 aa15.04■□□□□ -0
BRCA1-222ENST00000493919 RGPD5Q99666 1765 aa15.04■□□□□ -0
BRCA1-222ENST00000493919 RRS1Q15050 365 aaKnown RBP15.04■□□□□ -0
BRCA1-222ENST00000493919 COL18A1P39060 1754 aa15.03■□□□□ -0
BRCA1-222ENST00000493919 COL5A2P05997 1499 aaPredicted RBP15.03■□□□□ -0
BRCA1-222ENST00000493919 CC2D1BQ5T0F9 858 aaKnown RBP15.03■□□□□ -0
BRCA1-222ENST00000493919 ZNF316A6NFI3 1004 aaPredicted RBP15.02■□□□□ -0
BRCA1-222ENST00000493919 EVA1CP58658 441 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms