RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 TRPM1Q7Z4N2 1603 aa30.93■■■□□ 2.54
PFDN4-205ENST00000493356 EVC2Q86UK5 1308 aa30.93■■■□□ 2.54
PFDN4-205ENST00000493356 L3MBTL2Q969R5 705 aa30.91■■■□□ 2.54
PFDN4-205ENST00000493356 PPP1R1BQ9UD71 204 aaPredicted RBP30.91■■■□□ 2.54
PFDN4-205ENST00000493356 AKAP12Q02952 1782 aa30.9■■■□□ 2.54
PFDN4-205ENST00000493356 RGPD5Q99666 1765 aa30.9■■■□□ 2.54
PFDN4-205ENST00000493356 PTF1AQ7RTS3 328 aa30.9■■■□□ 2.54
PFDN4-205ENST00000493356 BCL11BQ9C0K0 894 aaPredicted RBP30.9■■■□□ 2.54
PFDN4-205ENST00000493356 ARHGEF25Q86VW2 580 aa30.89■■■□□ 2.54
PFDN4-205ENST00000493356 ANO8Q9HCE9 1232 aaPredicted RBP30.88■■■□□ 2.53
PFDN4-205ENST00000493356 TTC21BQ7Z4L5 1316 aa30.88■■■□□ 2.53
PFDN4-205ENST00000493356 MARCH10Q8NA82 808 aaPredicted RBP30.87■■■□□ 2.53
PFDN4-205ENST00000493356 CDCA7Q9BWT1 371 aaPredicted RBP30.87■■■□□ 2.53
PFDN4-205ENST00000493356 BCL9O00512 1426 aa30.87■■■□□ 2.53
PFDN4-205ENST00000493356 CASZ1Q86V15 1759 aa30.87■■■□□ 2.53
PFDN4-205ENST00000493356 KCNH5Q8NCM2 988 aa30.86■■■□□ 2.53
PFDN4-205ENST00000493356 ZNF692Q9BU19 519 aaPredicted RBP30.86■■■□□ 2.53
PFDN4-205ENST00000493356 NINLQ9Y2I6 1382 aa30.86■■■□□ 2.53
PFDN4-205ENST00000493356 YY1P25490 414 aa30.85■■■□□ 2.53
PFDN4-205ENST00000493356 CARD10Q9BWT7 1032 aa30.83■■■□□ 2.53
PFDN4-205ENST00000493356 NFAT5O94916 1531 aa30.83■■■□□ 2.53
PFDN4-205ENST00000493356 TTC21AQ8NDW8 1320 aa30.82■■■□□ 2.52
PFDN4-205ENST00000493356 SOX12O15370 315 aa30.82■■■□□ 2.52
PFDN4-205ENST00000493356 PROM2Q8N271 834 aa30.82■■■□□ 2.52
PFDN4-205ENST00000493356 CSB-PGBD3P0DP91 1061 aa30.81■■■□□ 2.52
PFDN4-205ENST00000493356 ROCK2O75116 1388 aaKnown RBP30.79■■■□□ 2.52
PFDN4-205ENST00000493356 PDGFDQ9GZP0 370 aaPredicted RBP30.78■■■□□ 2.52
PFDN4-205ENST00000493356 SIN3AQ96ST3 1273 aa30.77■■■□□ 2.52
PFDN4-205ENST00000493356 ABCC6O95255 1503 aa30.77■■■□□ 2.52
PFDN4-205ENST00000493356 KTN1Q86UP2 1357 aaKnown RBP30.77■■■□□ 2.52
PFDN4-205ENST00000493356 MON2Q7Z3U7 1717 aa30.76■■■□□ 2.51
PFDN4-205ENST00000493356 DCAF8L1A6NGE4 600 aa30.75■■■□□ 2.51
PFDN4-205ENST00000493356 CCDC7Q96M83 1385 aa30.75■■■□□ 2.51
PFDN4-205ENST00000493356 EXOC5O00471 708 aa30.74■■■□□ 2.51
PFDN4-205ENST00000493356 TXNRD1Q16881 649 aa30.73■■■□□ 2.51
PFDN4-205ENST00000493356 TNS2Q63HR2 1409 aa30.73■■■□□ 2.51
PFDN4-205ENST00000493356 ZBTB7AO95365 584 aa30.72■■■□□ 2.51
PFDN4-205ENST00000493356 MYOM1P52179 1685 aa30.71■■■□□ 2.51
PFDN4-205ENST00000493356 USP54Q70EL1 1684 aa30.7■■■□□ 2.5
PFDN4-205ENST00000493356 NHSQ6T4R5 1651 aa30.69■■■□□ 2.5
PFDN4-205ENST00000493356 STK32BQ9NY57 414 aa30.69■■■□□ 2.5
PFDN4-205ENST00000493356 PTGER2P43116 358 aa30.68■■■□□ 2.5
PFDN4-205ENST00000493356 NEUROD1Q13562 356 aa30.68■■■□□ 2.5
PFDN4-205ENST00000493356 USP31Q70CQ4 1352 aa30.67■■■□□ 2.5
PFDN4-205ENST00000493356 SLC15A2Q16348 729 aa30.67■■■□□ 2.5
PFDN4-205ENST00000493356 SBNO2Q9Y2G9 1366 aa30.66■■■□□ 2.5
PFDN4-205ENST00000493356 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.66■■■□□ 2.5
PFDN4-205ENST00000493356 LTN1O94822 1766 aa30.65■■■□□ 2.5
PFDN4-205ENST00000493356 ATF5Q9Y2D1 282 aaPredicted RBP30.65■■■□□ 2.5
PFDN4-205ENST00000493356 ERBB3P21860 1342 aa30.65■■■□□ 2.5
PFDN4-205ENST00000493356 CD163L1Q9NR16 1453 aa30.64■■■□□ 2.5
PFDN4-205ENST00000493356 NME9Q86XW9 330 aa30.62■■■□□ 2.49
PFDN4-205ENST00000493356 NLRP2Q9NX02 1062 aa30.61■■■□□ 2.49
PFDN4-205ENST00000493356 ACSBG1Q96GR2 724 aa30.6■■■□□ 2.49
PFDN4-205ENST00000493356 PAPPAQ13219 1627 aa30.58■■■□□ 2.49
PFDN4-205ENST00000493356 IL2RBP14784 551 aa30.58■■■□□ 2.49
PFDN4-205ENST00000493356 MTFR1LQ9H019 292 aa30.58■■■□□ 2.49
PFDN4-205ENST00000493356 BTAF1O14981 1849 aa30.58■■■□□ 2.49
PFDN4-205ENST00000493356 SGIP1Q9BQI5 828 aa30.56■■■□□ 2.48
PFDN4-205ENST00000493356 FHDC1Q9C0D6 1143 aaPredicted RBP30.56■■■□□ 2.48
PFDN4-205ENST00000493356 TMC1Q8TDI8 760 aa30.55■■■□□ 2.48
PFDN4-205ENST00000493356 ANKRD24Q8TF21 1146 aa30.55■■■□□ 2.48
PFDN4-205ENST00000493356 SYT17Q9BSW7 474 aa30.55■■■□□ 2.48
PFDN4-205ENST00000493356 UTRNP46939 3433 aa30.54■■■□□ 2.48
PFDN4-205ENST00000493356 EDC4Q6P2E9 1401 aaKnown RBP30.54■■■□□ 2.48
PFDN4-205ENST00000493356 KAT6BQ8WYB5 2073 aa30.53■■■□□ 2.48
PFDN4-205ENST00000493356 HDGFL2Q7Z4V5 671 aaPredicted RBP30.53■■■□□ 2.48
PFDN4-205ENST00000493356 CARD11Q9BXL7 1154 aa30.53■■■□□ 2.48
PFDN4-205ENST00000493356 SLC12A5Q9H2X9 1139 aa30.52■■■□□ 2.48
PFDN4-205ENST00000493356 A0A1W2PP64 1363 aa30.49■■■□□ 2.47
PFDN4-205ENST00000493356 ZNF827Q17R98 1081 aa30.47■■■□□ 2.47
PFDN4-205ENST00000493356 TERF2IPQ9NYB0 399 aa30.47■■■□□ 2.47
PFDN4-205ENST00000493356 ARXQ96QS3 562 aa30.46■■■□□ 2.47
PFDN4-205ENST00000493356 LRRC4BQ9NT99 713 aa30.46■■■□□ 2.47
PFDN4-205ENST00000493356 FAM208AQ9UK61 1670 aaKnown RBP30.46■■■□□ 2.47
PFDN4-205ENST00000493356 CHD4Q14839 1912 aa30.44■■■□□ 2.46
PFDN4-205ENST00000493356 ZNF784Q8NCA9 323 aaPredicted RBP30.44■■■□□ 2.46
PFDN4-205ENST00000493356 IP6K1Q92551 441 aa30.43■■■□□ 2.46
PFDN4-205ENST00000493356 MAP3K5Q99683 1374 aa30.42■■■□□ 2.46
PFDN4-205ENST00000493356 PUS7Q96PZ0 661 aaKnown RBP30.42■■■□□ 2.46
PFDN4-205ENST00000493356 QSER1Q2KHR3 1735 aa30.41■■■□□ 2.46
PFDN4-205ENST00000493356 DDX54Q8TDD1 881 aaKnown RBP30.4■■■□□ 2.46
PFDN4-205ENST00000493356 LTV1Q96GA3 475 aaPredicted RBP30.39■■■□□ 2.46
PFDN4-205ENST00000493356 AKT1S1Q96B36 256 aa30.38■■■□□ 2.45
PFDN4-205ENST00000493356 SLC27A3Q5K4L6 730 aa30.37■■■□□ 2.45
PFDN4-205ENST00000493356 DOT1LQ8TEK3 1739 aa30.35■■■□□ 2.45
PFDN4-205ENST00000493356 COL24A1Q17RW2 1714 aa30.34■■■□□ 2.45
PFDN4-205ENST00000493356 SLC16A10Q8TF71 515 aa30.34■■■□□ 2.45
PFDN4-205ENST00000493356 TUBGCP6Q96RT7 1819 aa30.33■■■□□ 2.45
PFDN4-205ENST00000493356 TONSLQ96HA7 1378 aa30.33■■■□□ 2.45
PFDN4-205ENST00000493356 MAP3K19Q56UN5 1328 aa30.33■■■□□ 2.45
PFDN4-205ENST00000493356 RGPD2P0DJD1 1756 aa30.33■■■□□ 2.45
PFDN4-205ENST00000493356 SHANK3Q9BYB0 1731 aa30.33■■■□□ 2.45
PFDN4-205ENST00000493356 ANKRD36BQ8N2N9 1353 aa30.32■■■□□ 2.44
PFDN4-205ENST00000493356 COG3Q96JB2 828 aa30.32■■■□□ 2.44
PFDN4-205ENST00000493356 LY75O60449 1722 aa30.31■■■□□ 2.44
PFDN4-205ENST00000493356 PNPLA7Q6ZV29 1317 aa30.31■■■□□ 2.44
PFDN4-205ENST00000493356 HOXC9P31274 260 aa30.31■■■□□ 2.44
PFDN4-205ENST00000493356 SYTL4Q96C24 671 aaPredicted RBP30.31■■■□□ 2.44
PFDN4-205ENST00000493356 TESK2Q96S53 571 aa30.31■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 183.5 ms