RNA–Protein interactions for RNA: ENST00000491734.6

EXD3-212, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 1 (best)

Gene EXD3, Length 2,176 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-212ENST00000491734 PRKAR2BP31323 418 aa23.14■■□□□ 1.3
EXD3-212ENST00000491734 IL13P35225 146 aa23.14■■□□□ 1.3
EXD3-212ENST00000491734 TSR2Q969E8 191 aaKnown RBP23.14■■□□□ 1.3
EXD3-212ENST00000491734 PMFBP1Q8TBY8 1022 aa23.13■■□□□ 1.29
EXD3-212ENST00000491734 VIRMAQ69YN4 1812 aaKnown RBP23.13■■□□□ 1.29
EXD3-212ENST00000491734 PNNQ9H307 717 aaKnown RBP23.13■■□□□ 1.29
EXD3-212ENST00000491734 SSH2Q76I76 1423 aa23.13■■□□□ 1.29
EXD3-212ENST00000491734 LRRC7Q96NW7 1537 aa23.12■■□□□ 1.29
EXD3-212ENST00000491734 BCL2L13Q9BXK5 485 aa23.11■■□□□ 1.29
EXD3-212ENST00000491734 FRAT1Q92837 279 aaPredicted RBP23.11■■□□□ 1.29
EXD3-212ENST00000491734 PHACTR3Q96KR7 559 aa23.11■■□□□ 1.29
EXD3-212ENST00000491734 RTN4Q9NQC3 1192 aaKnown RBP23.11■■□□□ 1.29
EXD3-212ENST00000491734 CDK12Q9NYV4 1490 aaPredicted RBP23.11■■□□□ 1.29
EXD3-212ENST00000491734 CANXP27824 592 aaKnown RBP23.1■■□□□ 1.29
EXD3-212ENST00000491734 NWD1Q149M9 1564 aa23.1■■□□□ 1.29
EXD3-212ENST00000491734 PANK1Q8TE04 598 aa23.09■■□□□ 1.29
EXD3-212ENST00000491734 BRPF3Q9ULD4 1205 aa23.08■■□□□ 1.29
EXD3-212ENST00000491734 OVOS2A0A0J9YW53 1432 aa23.08■■□□□ 1.28
EXD3-212ENST00000491734 OVOS2Q6IE36 1432 aa23.08■■□□□ 1.28
EXD3-212ENST00000491734 TNNQ9UQP3 1299 aa23.07■■□□□ 1.28
EXD3-212ENST00000491734 SLC4A3P48751 1232 aa23.07■■□□□ 1.28
EXD3-212ENST00000491734 EXOSC9Q06265 439 aaKnown RBP23.07■■□□□ 1.28
EXD3-212ENST00000491734 PDE3AQ14432 1141 aa23.07■■□□□ 1.28
EXD3-212ENST00000491734 COG6Q9Y2V7 657 aa23.06■■□□□ 1.28
EXD3-212ENST00000491734 ADGRL3Q9HAR2 1447 aa23.05■■□□□ 1.28
EXD3-212ENST00000491734 IL16Q14005 1332 aa23.04■■□□□ 1.28
EXD3-212ENST00000491734 SOX12O15370 315 aa23.04■■□□□ 1.28
EXD3-212ENST00000491734 NGDNQ8NEJ9 315 aaKnown RBP23.04■■□□□ 1.28
EXD3-212ENST00000491734 TTC21AQ8NDW8 1320 aa23.04■■□□□ 1.28
EXD3-212ENST00000491734 NFE2L2Q16236 605 aa23.03■■□□□ 1.28
EXD3-212ENST00000491734 RLBP1P12271 317 aa23.01■■□□□ 1.27
EXD3-212ENST00000491734 RBM33Q96EV2 1170 aaKnown RBP23.01■■□□□ 1.27
EXD3-212ENST00000491734 USP31Q70CQ4 1352 aa23.01■■□□□ 1.27
EXD3-212ENST00000491734 EIF4A2Q14240 407 aaKnown RBP23.01■■□□□ 1.27
EXD3-212ENST00000491734 THUMPD2Q9BTF0 503 aaKnown RBP23.01■■□□□ 1.27
EXD3-212ENST00000491734 PIK3C2AO00443 1686 aa23■■□□□ 1.27
EXD3-212ENST00000491734 FRAT2O75474 233 aaPredicted RBP22.99■■□□□ 1.27
EXD3-212ENST00000491734 CLUAP1Q96AJ1 413 aa22.99■■□□□ 1.27
EXD3-212ENST00000491734 USP54Q70EL1 1684 aa22.98■■□□□ 1.27
EXD3-212ENST00000491734 HSP90AB2PQ58FF8 381 aa22.98■■□□□ 1.27
EXD3-212ENST00000491734 CT47B1P0C2W7 299 aaPredicted RBP22.97■■□□□ 1.27
EXD3-212ENST00000491734 AEBP1Q8IUX7 1158 aa22.97■■□□□ 1.27
EXD3-212ENST00000491734 SSH1Q8WYL5 1049 aa22.96■■□□□ 1.27
EXD3-212ENST00000491734 USP19O94966 1318 aa22.96■■□□□ 1.27
EXD3-212ENST00000491734 IGHDP01880 384 aa22.96■■□□□ 1.27
EXD3-212ENST00000491734 RGS3P49796 1198 aa22.96■■□□□ 1.27
EXD3-212ENST00000491734 SMC4Q9NTJ3 1288 aa22.96■■□□□ 1.27
EXD3-212ENST00000491734 MARF1Q9Y4F3 1742 aaKnown RBP22.95■■□□□ 1.26
EXD3-212ENST00000491734 SULT6B1Q6IMI4 303 aa22.94■■□□□ 1.26
EXD3-212ENST00000491734 PEAK1Q9H792 1746 aa22.94■■□□□ 1.26
EXD3-212ENST00000491734 LMTK3Q96Q04 1460 aa22.94■■□□□ 1.26
EXD3-212ENST00000491734 MAP3K19Q56UN5 1328 aa22.94■■□□□ 1.26
EXD3-212ENST00000491734 ZKSCAN2Q63HK3 967 aa22.93■■□□□ 1.26
EXD3-212ENST00000491734 FAM43AQ8N2R8 423 aa22.93■■□□□ 1.26
EXD3-212ENST00000491734 FAM83GA6ND36 823 aa22.92■■□□□ 1.26
EXD3-212ENST00000491734 NUTM2GQ5VZR2 741 aa22.92■■□□□ 1.26
EXD3-212ENST00000491734 PHF8Q9UPP1 1060 aa22.92■■□□□ 1.26
EXD3-212ENST00000491734 AAMPQ13685 434 aa22.91■■□□□ 1.26
EXD3-212ENST00000491734 STRCP1A6NGW2 1772 aa22.9■■□□□ 1.26
EXD3-212ENST00000491734 NLRP6P59044 892 aa22.9■■□□□ 1.26
EXD3-212ENST00000491734 DCTN1Q14203 1278 aa22.9■■□□□ 1.26
EXD3-212ENST00000491734 NOB1Q9ULX3 412 aaKnown RBP22.89■■□□□ 1.26
EXD3-212ENST00000491734 DZIP1LQ8IYY4 767 aaKnown RBP22.89■■□□□ 1.25
EXD3-212ENST00000491734 BECN1Q14457 450 aa22.88■■□□□ 1.25
EXD3-212ENST00000491734 ZNF853P0CG23 659 aa22.87■■□□□ 1.25
EXD3-212ENST00000491734 TRIM27P14373 513 aa22.87■■□□□ 1.25
EXD3-212ENST00000491734 CALD1Q05682 793 aaKnown RBP22.87■■□□□ 1.25
EXD3-212ENST00000491734 PROSER2Q86WR7 435 aaPredicted RBP22.87■■□□□ 1.25
EXD3-212ENST00000491734 IFT57Q9NWB7 429 aa22.87■■□□□ 1.25
EXD3-212ENST00000491734 PCDHB15Q9Y5E8 787 aa22.87■■□□□ 1.25
EXD3-212ENST00000491734 RGPD1P0DJD0 1748 aa22.87■■□□□ 1.25
EXD3-212ENST00000491734 MVPQ14764 893 aaKnown RBP22.87■■□□□ 1.25
EXD3-212ENST00000491734 FTSJ3Q8IY81 847 aaKnown RBP22.87■■□□□ 1.25
EXD3-212ENST00000491734 MBIPQ9NS73 344 aa22.87■■□□□ 1.25
EXD3-212ENST00000491734 GNAI1P63096 354 aa22.86■■□□□ 1.25
EXD3-212ENST00000491734 C14orf37Q86TY3 774 aa22.86■■□□□ 1.25
EXD3-212ENST00000491734 HSPA2P54652 639 aa22.86■■□□□ 1.25
EXD3-212ENST00000491734 LMOD3Q0VAK6 560 aa22.86■■□□□ 1.25
EXD3-212ENST00000491734 TSPYL6Q8N831 410 aa22.86■■□□□ 1.25
EXD3-212ENST00000491734 SBNO1A3KN83 1393 aa22.85■■□□□ 1.25
EXD3-212ENST00000491734 AMPHP49418 695 aa22.85■■□□□ 1.25
EXD3-212ENST00000491734 ATF7IPQ6VMQ6 1270 aa22.84■■□□□ 1.25
EXD3-212ENST00000491734 ESCO1Q5FWF5 840 aa22.84■■□□□ 1.25
EXD3-212ENST00000491734 ABTB2Q8N961 1025 aa22.84■■□□□ 1.25
EXD3-212ENST00000491734 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.84■■□□□ 1.25
EXD3-212ENST00000491734 FLT4P35916 1363 aa22.84■■□□□ 1.25
EXD3-212ENST00000491734 ELL2O00472 640 aaPredicted RBP22.83■■□□□ 1.25
EXD3-212ENST00000491734 VAMP4O75379 141 aa22.83■■□□□ 1.25
EXD3-212ENST00000491734 ALDH1L2Q3SY69 923 aa22.83■■□□□ 1.24
EXD3-212ENST00000491734 CFAP44Q96MT7 982 aa22.83■■□□□ 1.24
EXD3-212ENST00000491734 C19orf44Q9H6X5 657 aa22.82■■□□□ 1.24
EXD3-212ENST00000491734 NCOA3Q9Y6Q9 1424 aa22.82■■□□□ 1.24
EXD3-212ENST00000491734 STRCQ7RTU9 1775 aa22.81■■□□□ 1.24
EXD3-212ENST00000491734 DLG5Q8TDM6 1919 aa22.81■■□□□ 1.24
EXD3-212ENST00000491734 KIF24Q5T7B8 1368 aa22.8■■□□□ 1.24
EXD3-212ENST00000491734 KIF1AQ12756 1690 aa22.8■■□□□ 1.24
EXD3-212ENST00000491734 MCM10Q7L590 875 aa22.8■■□□□ 1.24
EXD3-212ENST00000491734 C8orf58Q8NAV2 365 aa22.8■■□□□ 1.24
EXD3-212ENST00000491734 EYA1Q99502 592 aa22.8■■□□□ 1.24
EXD3-212ENST00000491734 ARHGEF10O15013 1369 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms