RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	SYT17	Q9BSW7	474 aa		28.03	■■■□□ 2.08
CDK5RAP2-218	ENST00000491334	TXNRD1	Q16881	649 aa		28.02	■■■□□ 2.08
CDK5RAP2-218	ENST00000491334	SLC15A2	Q16348	729 aa		28.01	■■■□□ 2.07
CDK5RAP2-218	ENST00000491334	FHDC1	Q9C0D6	1143 aa	Predicted RBP	28.01	■■■□□ 2.07
CDK5RAP2-218	ENST00000491334	BCL9	O00512	1426 aa		28.01	■■■□□ 2.07
CDK5RAP2-218	ENST00000491334	SBF2	Q86WG5	1849 aa		28	■■■□□ 2.07
CDK5RAP2-218	ENST00000491334	CABP2	Q9NPB3	220 aa		28	■■■□□ 2.07
CDK5RAP2-218	ENST00000491334	CASZ1	Q86V15	1759 aa		28	■■■□□ 2.07
CDK5RAP2-218	ENST00000491334	WDR17	Q8IZU2	1322 aa		27.99	■■■□□ 2.07
CDK5RAP2-218	ENST00000491334	MTFR1L	Q9H019	292 aa		27.99	■■■□□ 2.07
CDK5RAP2-218	ENST00000491334	EXOC5	O00471	708 aa		27.98	■■■□□ 2.07
CDK5RAP2-218	ENST00000491334	CABP1	Q9NZU7	370 aa		27.98	■■■□□ 2.07
CDK5RAP2-218	ENST00000491334	AXIN2	Q9Y2T1	843 aa		27.98	■■■□□ 2.07
CDK5RAP2-218	ENST00000491334	SENP3-EIF4A1	A0A087X0R7	540 aa		27.97	■■■□□ 2.07
CDK5RAP2-218	ENST00000491334	UTRN	P46939	3433 aa		27.97	■■■□□ 2.07
CDK5RAP2-218	ENST00000491334	LRRC37A3	O60309	1634 aa		27.96	■■■□□ 2.07
CDK5RAP2-218	ENST00000491334	C1QTNF8	P60827	252 aa		27.95	■■■□□ 2.06
CDK5RAP2-218	ENST00000491334	CARD10	Q9BWT7	1032 aa		27.95	■■■□□ 2.06
CDK5RAP2-218	ENST00000491334	CENPJ	Q9HC77	1338 aa	Predicted RBP	27.94	■■■□□ 2.06
CDK5RAP2-218	ENST00000491334	CSB-PGBD3	P0DP91	1061 aa		27.94	■■■□□ 2.06
CDK5RAP2-218	ENST00000491334	NBPF1	Q3BBV0	1214 aa		27.94	■■■□□ 2.06
CDK5RAP2-218	ENST00000491334	USP6	P35125	1406 aa		27.93	■■■□□ 2.06
CDK5RAP2-218	ENST00000491334	MYOM1	P52179	1685 aa		27.92	■■■□□ 2.06
CDK5RAP2-218	ENST00000491334	KCNH5	Q8NCM2	988 aa		27.92	■■■□□ 2.06
CDK5RAP2-218	ENST00000491334	ARHGEF25	Q86VW2	580 aa		27.91	■■■□□ 2.06
CDK5RAP2-218	ENST00000491334	SGIP1	Q9BQI5	828 aa		27.91	■■■□□ 2.06
CDK5RAP2-218	ENST00000491334	ARX	Q96QS3	562 aa		27.9	■■■□□ 2.06
CDK5RAP2-218	ENST00000491334	SLIT3	O75094	1523 aa		27.9	■■■□□ 2.06
CDK5RAP2-218	ENST00000491334	ZNF692	Q9BU19	519 aa	Predicted RBP	27.86	■■■□□ 2.05
CDK5RAP2-218	ENST00000491334	CPSF1	Q10570	1443 aa	Known RBP	27.85	■■■□□ 2.05
CDK5RAP2-218	ENST00000491334	KIAA1210	Q9ULL0	1709 aa		27.85	■■■□□ 2.05
CDK5RAP2-218	ENST00000491334	COL18A1	P39060	1754 aa		27.85	■■■□□ 2.05
CDK5RAP2-218	ENST00000491334	CHD4	Q14839	1912 aa		27.84	■■■□□ 2.05
CDK5RAP2-218	ENST00000491334	GPR162	Q16538	588 aa		27.83	■■■□□ 2.05
CDK5RAP2-218	ENST00000491334	CCDC7	Q96M83	1385 aa		27.83	■■■□□ 2.05
CDK5RAP2-218	ENST00000491334	AKAP12	Q02952	1782 aa		27.83	■■■□□ 2.05
CDK5RAP2-218	ENST00000491334	SOX12	O15370	315 aa		27.82	■■■□□ 2.04
CDK5RAP2-218	ENST00000491334	TTC21B	Q7Z4L5	1316 aa		27.81	■■■□□ 2.04
CDK5RAP2-218	ENST00000491334	MAP3K5	Q99683	1374 aa		27.81	■■■□□ 2.04
CDK5RAP2-218	ENST00000491334	ACSBG1	Q96GR2	724 aa		27.8	■■■□□ 2.04
CDK5RAP2-218	ENST00000491334	EVC2	Q86UK5	1308 aa		27.8	■■■□□ 2.04
CDK5RAP2-218	ENST00000491334	TTC21A	Q8NDW8	1320 aa		27.77	■■■□□ 2.04
CDK5RAP2-218	ENST00000491334	WNK3	Q9BYP7	1800 aa		27.77	■■■□□ 2.04
CDK5RAP2-218	ENST00000491334	GIGYF1	O75420	1035 aa	Predicted RBP	27.75	■■■□□ 2.03
CDK5RAP2-218	ENST00000491334	IFFO2	Q5TF58	517 aa		27.75	■■■□□ 2.03
CDK5RAP2-218	ENST00000491334	TNS2	Q63HR2	1409 aa		27.75	■■■□□ 2.03
CDK5RAP2-218	ENST00000491334	PIK3C2A	O00443	1686 aa		27.75	■■■□□ 2.03
CDK5RAP2-218	ENST00000491334	SLC16A10	Q8TF71	515 aa		27.74	■■■□□ 2.03
CDK5RAP2-218	ENST00000491334	POLD1	P28340	1107 aa		27.72	■■■□□ 2.03
CDK5RAP2-218	ENST00000491334	NLRP2	Q9NX02	1062 aa		27.72	■■■□□ 2.03
CDK5RAP2-218	ENST00000491334	IL2RB	P14784	551 aa		27.71	■■■□□ 2.03
CDK5RAP2-218	ENST00000491334	RGPD5	Q99666	1765 aa		27.71	■■■□□ 2.03
CDK5RAP2-218	ENST00000491334	ZNF827	Q17R98	1081 aa		27.7	■■■□□ 2.02
CDK5RAP2-218	ENST00000491334	KLHL34	Q8N239	644 aa		27.7	■■■□□ 2.02
CDK5RAP2-218	ENST00000491334	LRRC4B	Q9NT99	713 aa		27.69	■■■□□ 2.02
CDK5RAP2-218	ENST00000491334	QRICH2	Q9H0J4	1663 aa		27.68	■■■□□ 2.02
CDK5RAP2-218	ENST00000491334	PELP1	Q8IZL8	1130 aa	Known RBP	27.68	■■■□□ 2.02
CDK5RAP2-218	ENST00000491334	TRPM1	Q7Z4N2	1603 aa		27.67	■■■□□ 2.02
CDK5RAP2-218	ENST00000491334	NHS	Q6T4R5	1651 aa		27.67	■■■□□ 2.02
CDK5RAP2-218	ENST00000491334	SLC27A3	Q5K4L6	730 aa		27.66	■■■□□ 2.02
CDK5RAP2-218	ENST00000491334	AKT1S1	Q96B36	256 aa		27.66	■■■□□ 2.02
CDK5RAP2-218	ENST00000491334	KTN1	Q86UP2	1357 aa	Known RBP	27.65	■■■□□ 2.02
CDK5RAP2-218	ENST00000491334	KAT6B	Q8WYB5	2073 aa		27.65	■■■□□ 2.02
CDK5RAP2-218	ENST00000491334	ERBB3	P21860	1342 aa		27.65	■■■□□ 2.02
CDK5RAP2-218	ENST00000491334	ABCC6	O95255	1503 aa		27.64	■■■□□ 2.02
CDK5RAP2-218	ENST00000491334	NFAT5	O94916	1531 aa		27.63	■■■□□ 2.01
CDK5RAP2-218	ENST00000491334	TFCP2L1	Q9NZI6	479 aa		27.62	■■■□□ 2.01
CDK5RAP2-218	ENST00000491334	PAPPA	Q13219	1627 aa		27.62	■■■□□ 2.01
CDK5RAP2-218	ENST00000491334	GRIN3B	O60391	1043 aa		27.6	■■■□□ 2.01
CDK5RAP2-218	ENST00000491334	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	27.6	■■■□□ 2.01
CDK5RAP2-218	ENST00000491334	ANKRD24	Q8TF21	1146 aa		27.6	■■■□□ 2.01
CDK5RAP2-218	ENST00000491334	PNPLA7	Q6ZV29	1317 aa		27.58	■■■□□ 2.01
CDK5RAP2-218	ENST00000491334	USP31	Q70CQ4	1352 aa		27.58	■■■□□ 2.01
CDK5RAP2-218	ENST00000491334	BTAF1	O14981	1849 aa		27.57	■■■□□ 2
CDK5RAP2-218	ENST00000491334	CEP350	Q5VT06	3117 aa		27.57	■■■□□ 2
CDK5RAP2-218	ENST00000491334	DDX54	Q8TDD1	881 aa	Known RBP	27.57	■■■□□ 2
CDK5RAP2-218	ENST00000491334	GOLGB1	Q14789	3259 aa	Known RBP	27.57	■■■□□ 2
CDK5RAP2-218	ENST00000491334	NLGN2	Q8NFZ4	835 aa		27.55	■■■□□ 2
CDK5RAP2-218	ENST00000491334	L3MBTL2	Q969R5	705 aa		27.55	■■■□□ 2
CDK5RAP2-218	ENST00000491334	NME9	Q86XW9	330 aa		27.53	■■■□□ 2
CDK5RAP2-218	ENST00000491334	SYTL4	Q96C24	671 aa	Predicted RBP	27.52	■■■□□ 2
CDK5RAP2-218	ENST00000491334	PRIM1	P49642	420 aa	Known RBP	27.5	■■□□□ 1.99
CDK5RAP2-218	ENST00000491334	KCNQ4	P56696	695 aa		27.5	■■□□□ 1.99
CDK5RAP2-218	ENST00000491334	ROCK2	O75116	1388 aa	Known RBP	27.49	■■□□□ 1.99
CDK5RAP2-218	ENST00000491334	YBX3	P16989	372 aa	Known RBP eCLIP	27.49	■■□□□ 1.99
CDK5RAP2-218	ENST00000491334	MSH5	O43196	834 aa		27.48	■■□□□ 1.99
CDK5RAP2-218	ENST00000491334	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	27.48	■■□□□ 1.99
CDK5RAP2-218	ENST00000491334	QSER1	Q2KHR3	1735 aa		27.47	■■□□□ 1.99
CDK5RAP2-218	ENST00000491334	TMC1	Q8TDI8	760 aa		27.46	■■□□□ 1.99
CDK5RAP2-218	ENST00000491334	IP6K1	Q92551	441 aa		27.46	■■□□□ 1.99
CDK5RAP2-218	ENST00000491334	COL24A1	Q17RW2	1714 aa		27.44	■■□□□ 1.98
CDK5RAP2-218	ENST00000491334	SHANK3	Q9BYB0	1731 aa		27.44	■■□□□ 1.98
CDK5RAP2-218	ENST00000491334	LTV1	Q96GA3	475 aa	Predicted RBP	27.44	■■□□□ 1.98
CDK5RAP2-218	ENST00000491334	CCNL1	Q9UK58	526 aa	Predicted RBP	27.44	■■□□□ 1.98
CDK5RAP2-218	ENST00000491334	ANKRD36B	Q8N2N9	1353 aa		27.44	■■□□□ 1.98
CDK5RAP2-218	ENST00000491334	SBNO2	Q9Y2G9	1366 aa		27.44	■■□□□ 1.98
CDK5RAP2-218	ENST00000491334	COL23A1	Q86Y22	540 aa	Predicted RBP	27.42	■■□□□ 1.98
CDK5RAP2-218	ENST00000491334	GPBP1L1	Q9HC44	474 aa	Predicted RBP	27.42	■■□□□ 1.98
CDK5RAP2-218	ENST00000491334	HMGB2	P26583	209 aa	Known RBP	27.41	■■□□□ 1.98
CDK5RAP2-218	ENST00000491334	ZCRB1	Q8TBF4	217 aa	Known RBP	27.4	■■□□□ 1.98

Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms