RNA–Protein interactions for RNA: ENST00000491288.5

DNMT3A-214, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-214ENST00000491288 CPSF1Q10570 1443 aaKnown RBP18.7■□□□□ 0.58
DNMT3A-214ENST00000491288 TNS1Q9HBL0 1735 aaKnown RBP18.7■□□□□ 0.58
DNMT3A-214ENST00000491288 USP35Q9P2H5 1018 aa18.7■□□□□ 0.58
DNMT3A-214ENST00000491288 TTC21BQ7Z4L5 1316 aa18.7■□□□□ 0.58
DNMT3A-214ENST00000491288 TTC21AQ8NDW8 1320 aa18.7■□□□□ 0.58
DNMT3A-214ENST00000491288 SLIT3O75094 1523 aa18.69■□□□□ 0.58
DNMT3A-214ENST00000491288 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.69■□□□□ 0.58
DNMT3A-214ENST00000491288 PDE3BQ13370 1112 aa18.68■□□□□ 0.58
DNMT3A-214ENST00000491288 CRB1P82279 1406 aa18.67■□□□□ 0.58
DNMT3A-214ENST00000491288 APBA3O96018 575 aa18.66■□□□□ 0.58
DNMT3A-214ENST00000491288 R3HDM1Q15032 1099 aaKnown RBP18.66■□□□□ 0.58
DNMT3A-214ENST00000491288 AKAP12Q02952 1782 aa18.65■□□□□ 0.58
DNMT3A-214ENST00000491288 C11orf95C9JLR9 678 aaPredicted RBP18.65■□□□□ 0.58
DNMT3A-214ENST00000491288 ANKRD36BQ8N2N9 1353 aa18.65■□□□□ 0.58
DNMT3A-214ENST00000491288 A0A1W2PP64 1363 aa18.64■□□□□ 0.57
DNMT3A-214ENST00000491288 ARHGEF25Q86VW2 580 aa18.63■□□□□ 0.57
DNMT3A-214ENST00000491288 AXIN2Q9Y2T1 843 aa18.63■□□□□ 0.57
DNMT3A-214ENST00000491288 EDC4Q6P2E9 1401 aaKnown RBP18.63■□□□□ 0.57
DNMT3A-214ENST00000491288 KCNH5Q8NCM2 988 aa18.62■□□□□ 0.57
DNMT3A-214ENST00000491288 CD163L1Q9NR16 1453 aa18.62■□□□□ 0.57
DNMT3A-214ENST00000491288 PIK3C2AO00443 1686 aa18.61■□□□□ 0.57
DNMT3A-214ENST00000491288 PARP4Q9UKK3 1724 aaKnown RBP18.6■□□□□ 0.57
DNMT3A-214ENST00000491288 WDR17Q8IZU2 1322 aa18.6■□□□□ 0.57
DNMT3A-214ENST00000491288 NME9Q86XW9 330 aa18.6■□□□□ 0.57
DNMT3A-214ENST00000491288 COL18A1P39060 1754 aa18.6■□□□□ 0.57
DNMT3A-214ENST00000491288 MON2Q7Z3U7 1717 aa18.6■□□□□ 0.57
DNMT3A-214ENST00000491288 BCL9O00512 1426 aa18.59■□□□□ 0.57
DNMT3A-214ENST00000491288 ZBTB7CA1YPR0 619 aa18.59■□□□□ 0.57
DNMT3A-214ENST00000491288 COG3Q96JB2 828 aa18.59■□□□□ 0.57
DNMT3A-214ENST00000491288 OVOS2A0A0G2JMS6 1433 aa18.58■□□□□ 0.57
DNMT3A-214ENST00000491288 OVOS2A0A0J9YW53 1432 aa18.58■□□□□ 0.57
DNMT3A-214ENST00000491288 OVOS2Q6IE36 1432 aa18.58■□□□□ 0.57
DNMT3A-214ENST00000491288 KIF7Q2M1P5 1343 aa18.58■□□□□ 0.57
DNMT3A-214ENST00000491288 PANK3Q9H999 370 aa18.58■□□□□ 0.56
DNMT3A-214ENST00000491288 PEAK1Q9H792 1746 aa18.57■□□□□ 0.56
DNMT3A-214ENST00000491288 PLSCR1O15162 318 aa18.57■□□□□ 0.56
DNMT3A-214ENST00000491288 SOX12O15370 315 aa18.57■□□□□ 0.56
DNMT3A-214ENST00000491288 TOM1L2Q6ZVM7 507 aa18.57■□□□□ 0.56
DNMT3A-214ENST00000491288 CDCA7Q9BWT1 371 aaPredicted RBP18.57■□□□□ 0.56
DNMT3A-214ENST00000491288 RREB1Q92766 1687 aa18.57■□□□□ 0.56
DNMT3A-214ENST00000491288 DDB1Q16531 1140 aa18.56■□□□□ 0.56
DNMT3A-214ENST00000491288 CARD10Q9BWT7 1032 aa18.56■□□□□ 0.56
DNMT3A-214ENST00000491288 CARD14Q9BXL6 1004 aa18.56■□□□□ 0.56
DNMT3A-214ENST00000491288 USP31Q70CQ4 1352 aa18.55■□□□□ 0.56
DNMT3A-214ENST00000491288 FYB1O15117 783 aa18.55■□□□□ 0.56
DNMT3A-214ENST00000491288 NFAT5O94916 1531 aa18.54■□□□□ 0.56
DNMT3A-214ENST00000491288 CGNL1Q0VF96 1302 aa18.54■□□□□ 0.56
DNMT3A-214ENST00000491288 NBPF14Q5TI25 921 aa18.54■□□□□ 0.56
DNMT3A-214ENST00000491288 KNSTRNQ9Y448 316 aa18.54■□□□□ 0.56
DNMT3A-214ENST00000491288 LRRC37A3O60309 1634 aa18.53■□□□□ 0.56
DNMT3A-214ENST00000491288 MARCH10Q8NA82 808 aaPredicted RBP18.53■□□□□ 0.56
DNMT3A-214ENST00000491288 BCL11BQ9C0K0 894 aaPredicted RBP18.53■□□□□ 0.56
DNMT3A-214ENST00000491288 GGNBP2Q9H3C7 697 aa18.53■□□□□ 0.56
DNMT3A-214ENST00000491288 ABCC6O95255 1503 aa18.53■□□□□ 0.56
DNMT3A-214ENST00000491288 CCDC7Q96M83 1385 aa18.53■□□□□ 0.56
DNMT3A-214ENST00000491288 NUP188Q5SRE5 1749 aa18.52■□□□□ 0.56
DNMT3A-214ENST00000491288 NSD3Q9BZ95 1437 aa18.52■□□□□ 0.56
DNMT3A-214ENST00000491288 MYOM1P52179 1685 aa18.51■□□□□ 0.55
DNMT3A-214ENST00000491288 PTF1AQ7RTS3 328 aa18.51■□□□□ 0.55
DNMT3A-214ENST00000491288 WASHC2AQ641Q2 1341 aa18.5■□□□□ 0.55
DNMT3A-214ENST00000491288 PROM2Q8N271 834 aa18.5■□□□□ 0.55
DNMT3A-214ENST00000491288 RGPD3A6NKT7 1758 aaPredicted RBP18.47■□□□□ 0.55
DNMT3A-214ENST00000491288 RGPD4Q7Z3J3 1758 aa18.47■□□□□ 0.55
DNMT3A-214ENST00000491288 USP54Q70EL1 1684 aa18.47■□□□□ 0.55
DNMT3A-214ENST00000491288 ERBB3P21860 1342 aa18.47■□□□□ 0.55
DNMT3A-214ENST00000491288 EXOC5O00471 708 aa18.46■□□□□ 0.55
DNMT3A-214ENST00000491288 ANO8Q9HCE9 1232 aaPredicted RBP18.46■□□□□ 0.55
DNMT3A-214ENST00000491288 KCNQ2O43526 872 aa18.45■□□□□ 0.54
DNMT3A-214ENST00000491288 CSB-PGBD3P0DP91 1061 aa18.45■□□□□ 0.54
DNMT3A-214ENST00000491288 AMPHP49418 695 aa18.45■□□□□ 0.54
DNMT3A-214ENST00000491288 SPON1Q9HCB6 807 aa18.45■□□□□ 0.54
DNMT3A-214ENST00000491288 TNS2Q63HR2 1409 aa18.44■□□□□ 0.54
DNMT3A-214ENST00000491288 MORC1Q86VD1 984 aa18.43■□□□□ 0.54
DNMT3A-214ENST00000491288 SBF2Q86WG5 1849 aa18.43■□□□□ 0.54
DNMT3A-214ENST00000491288 KIF20BQ96Q89 1820 aa18.43■□□□□ 0.54
DNMT3A-214ENST00000491288 WNK3Q9BYP7 1800 aa18.43■□□□□ 0.54
DNMT3A-214ENST00000491288 NSD2O96028 1365 aa18.42■□□□□ 0.54
DNMT3A-214ENST00000491288 FBLN1P23142 703 aa18.41■□□□□ 0.54
DNMT3A-214ENST00000491288 IP6K1Q92551 441 aa18.41■□□□□ 0.54
DNMT3A-214ENST00000491288 TNNT2P45379 298 aaPredicted RBP18.4■□□□□ 0.54
DNMT3A-214ENST00000491288 TXNRD1Q16881 649 aa18.4■□□□□ 0.54
DNMT3A-214ENST00000491288 PER1O15534 1290 aaPredicted RBP18.39■□□□□ 0.53
DNMT3A-214ENST00000491288 RRS1Q15050 365 aaKnown RBP18.39■□□□□ 0.53
DNMT3A-214ENST00000491288 MAP3K19Q56UN5 1328 aa18.39■□□□□ 0.53
DNMT3A-214ENST00000491288 RGPD5Q99666 1765 aa18.39■□□□□ 0.53
DNMT3A-214ENST00000491288 PPM1GO15355 546 aaPredicted RBP18.38■□□□□ 0.53
DNMT3A-214ENST00000491288 IL2RBP14784 551 aa18.38■□□□□ 0.53
DNMT3A-214ENST00000491288 ANKRD24Q8TF21 1146 aa18.38■□□□□ 0.53
DNMT3A-214ENST00000491288 PDGFDQ9GZP0 370 aaPredicted RBP18.38■□□□□ 0.53
DNMT3A-214ENST00000491288 CNGB1Q14028 1251 aaPredicted RBP18.37■□□□□ 0.53
DNMT3A-214ENST00000491288 CC2D1BQ5T0F9 858 aaKnown RBP18.37■□□□□ 0.53
DNMT3A-214ENST00000491288 NLRP2Q9NX02 1062 aa18.37■□□□□ 0.53
DNMT3A-214ENST00000491288 LTN1O94822 1766 aa18.36■□□□□ 0.53
DNMT3A-214ENST00000491288 HOXC9P31274 260 aa18.36■□□□□ 0.53
DNMT3A-214ENST00000491288 SLC15A2Q16348 729 aa18.36■□□□□ 0.53
DNMT3A-214ENST00000491288 AMER1Q5JTC6 1135 aaPredicted RBP18.36■□□□□ 0.53
DNMT3A-214ENST00000491288 CASZ1Q86V15 1759 aa18.36■□□□□ 0.53
DNMT3A-214ENST00000491288 LTV1Q96GA3 475 aaPredicted RBP18.36■□□□□ 0.53
DNMT3A-214ENST00000491288 PTGER2P43116 358 aa18.35■□□□□ 0.53
DNMT3A-214ENST00000491288 DDX10Q13206 875 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms