RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 PDE3BQ13370 1112 aa25.36■■□□□ 1.65
HMGN1-219ENST00000491183 FAM196AQ6ZSG2 479 aa25.36■■□□□ 1.65
HMGN1-219ENST00000491183 SLC24A1O60721 1099 aa25.35■■□□□ 1.65
HMGN1-219ENST00000491183 TOM1L2Q6ZVM7 507 aa25.35■■□□□ 1.65
HMGN1-219ENST00000491183 EDC4Q6P2E9 1401 aaKnown RBP25.35■■□□□ 1.65
HMGN1-219ENST00000491183 USP54Q70EL1 1684 aa25.35■■□□□ 1.65
HMGN1-219ENST00000491183 TIMELESSQ9UNS1 1208 aa25.34■■□□□ 1.65
HMGN1-219ENST00000491183 WDR17Q8IZU2 1322 aa25.34■■□□□ 1.65
HMGN1-219ENST00000491183 CLSPNQ9HAW4 1339 aa25.34■■□□□ 1.65
HMGN1-219ENST00000491183 USP47Q96K76 1375 aa25.33■■□□□ 1.65
HMGN1-219ENST00000491183 TRIM37O94972 964 aa25.33■■□□□ 1.65
HMGN1-219ENST00000491183 EN1Q05925 392 aaPredicted RBP25.33■■□□□ 1.65
HMGN1-219ENST00000491183 TNS1Q9HBL0 1735 aaKnown RBP25.33■■□□□ 1.65
HMGN1-219ENST00000491183 PARP4Q9UKK3 1724 aaKnown RBP25.33■■□□□ 1.65
HMGN1-219ENST00000491183 NINLQ9Y2I6 1382 aa25.3■■□□□ 1.64
HMGN1-219ENST00000491183 DISP2A7MBM2 1401 aa25.29■■□□□ 1.64
HMGN1-219ENST00000491183 TMF1P82094 1093 aa25.28■■□□□ 1.64
HMGN1-219ENST00000491183 CARD10Q9BWT7 1032 aa25.28■■□□□ 1.64
HMGN1-219ENST00000491183 CSB-PGBD3P0DP91 1061 aa25.27■■□□□ 1.64
HMGN1-219ENST00000491183 OVOS2A0A0J9YW53 1432 aa25.27■■□□□ 1.64
HMGN1-219ENST00000491183 OVOS2Q6IE36 1432 aa25.27■■□□□ 1.64
HMGN1-219ENST00000491183 ABCC6O95255 1503 aa25.26■■□□□ 1.63
HMGN1-219ENST00000491183 LTN1O94822 1766 aa25.26■■□□□ 1.63
HMGN1-219ENST00000491183 EZH2Q15910 746 aaKnown RBP25.25■■□□□ 1.63
HMGN1-219ENST00000491183 LRRC37A3O60309 1634 aa25.25■■□□□ 1.63
HMGN1-219ENST00000491183 WNK3Q9BYP7 1800 aa25.25■■□□□ 1.63
HMGN1-219ENST00000491183 APBA3O96018 575 aa25.24■■□□□ 1.63
HMGN1-219ENST00000491183 DDB1Q16531 1140 aa25.24■■□□□ 1.63
HMGN1-219ENST00000491183 CAMKK2Q96RR4 588 aa25.24■■□□□ 1.63
HMGN1-219ENST00000491183 ANKRD36BQ8N2N9 1353 aa25.23■■□□□ 1.63
HMGN1-219ENST00000491183 PEAK1Q9H792 1746 aa25.23■■□□□ 1.63
HMGN1-219ENST00000491183 CDCA7Q9BWT1 371 aaPredicted RBP25.21■■□□□ 1.63
HMGN1-219ENST00000491183 ERBB3P21860 1342 aa25.2■■□□□ 1.62
HMGN1-219ENST00000491183 PSDA5PKW4 1024 aaPredicted RBP25.19■■□□□ 1.62
HMGN1-219ENST00000491183 MARCH10Q8NA82 808 aaPredicted RBP25.19■■□□□ 1.62
HMGN1-219ENST00000491183 CCDC7Q96M83 1385 aa25.18■■□□□ 1.62
HMGN1-219ENST00000491183 C11orf95C9JLR9 678 aaPredicted RBP25.18■■□□□ 1.62
HMGN1-219ENST00000491183 COG3Q96JB2 828 aa25.18■■□□□ 1.62
HMGN1-219ENST00000491183 OVOS2A0A0G2JMS6 1433 aa25.18■■□□□ 1.62
HMGN1-219ENST00000491183 SBF2Q86WG5 1849 aa25.17■■□□□ 1.62
HMGN1-219ENST00000491183 FBLN1P23142 703 aa25.17■■□□□ 1.62
HMGN1-219ENST00000491183 ANKRD24Q8TF21 1146 aa25.17■■□□□ 1.62
HMGN1-219ENST00000491183 CDCA8Q53HL2 280 aa25.16■■□□□ 1.62
HMGN1-219ENST00000491183 SRCAPQ6ZRS2 3230 aa25.16■■□□□ 1.62
HMGN1-219ENST00000491183 CCER1Q8TC90 406 aaPredicted RBP25.16■■□□□ 1.62
HMGN1-219ENST00000491183 IP6K1Q92551 441 aa25.16■■□□□ 1.62
HMGN1-219ENST00000491183 NLRP2Q9NX02 1062 aa25.16■■□□□ 1.62
HMGN1-219ENST00000491183 EXOC5O00471 708 aa25.15■■□□□ 1.62
HMGN1-219ENST00000491183 FYB1O15117 783 aa25.15■■□□□ 1.62
HMGN1-219ENST00000491183 PARD3Q8TEW0 1356 aa25.14■■□□□ 1.61
HMGN1-219ENST00000491183 PTF1AQ7RTS3 328 aa25.13■■□□□ 1.61
HMGN1-219ENST00000491183 MAP3K19Q56UN5 1328 aa25.12■■□□□ 1.61
HMGN1-219ENST00000491183 R3HDM1Q15032 1099 aaKnown RBP25.12■■□□□ 1.61
HMGN1-219ENST00000491183 GGNBP2Q9H3C7 697 aa25.12■■□□□ 1.61
HMGN1-219ENST00000491183 RREB1Q92766 1687 aa25.12■■□□□ 1.61
HMGN1-219ENST00000491183 BCL9O00512 1426 aa25.11■■□□□ 1.61
HMGN1-219ENST00000491183 MYOM1P52179 1685 aa25.1■■□□□ 1.61
HMGN1-219ENST00000491183 CARD14Q9BXL6 1004 aa25.1■■□□□ 1.61
HMGN1-219ENST00000491183 HOXC9P31274 260 aa25.09■■□□□ 1.61
HMGN1-219ENST00000491183 LTV1Q96GA3 475 aaPredicted RBP25.09■■□□□ 1.61
HMGN1-219ENST00000491183 BCL11BQ9C0K0 894 aaPredicted RBP25.09■■□□□ 1.61
HMGN1-219ENST00000491183 IL2RBP14784 551 aa25.08■■□□□ 1.61
HMGN1-219ENST00000491183 TNS2Q63HR2 1409 aa25.08■■□□□ 1.61
HMGN1-219ENST00000491183 NUP188Q5SRE5 1749 aa25.08■■□□□ 1.61
HMGN1-219ENST00000491183 AMPHP49418 695 aa25.07■■□□□ 1.6
HMGN1-219ENST00000491183 PLSCR1O15162 318 aa25.06■■□□□ 1.6
HMGN1-219ENST00000491183 RRS1Q15050 365 aaKnown RBP25.06■■□□□ 1.6
HMGN1-219ENST00000491183 KIF20BQ96Q89 1820 aa25.05■■□□□ 1.6
HMGN1-219ENST00000491183 LRP5O75197 1615 aa25.04■■□□□ 1.6
HMGN1-219ENST00000491183 FAM208AQ9UK61 1670 aaKnown RBP25.03■■□□□ 1.6
HMGN1-219ENST00000491183 RGPD2P0DJD1 1756 aa25.03■■□□□ 1.6
HMGN1-219ENST00000491183 HSPA5P11021 654 aaKnown RBP25.02■■□□□ 1.6
HMGN1-219ENST00000491183 EIF4G2P78344 907 aaKnown RBP eCLIP25.02■■□□□ 1.6
HMGN1-219ENST00000491183 RGPD3A6NKT7 1758 aaPredicted RBP25.02■■□□□ 1.6
HMGN1-219ENST00000491183 RGPD4Q7Z3J3 1758 aa25.02■■□□□ 1.6
HMGN1-219ENST00000491183 KCNQ2O43526 872 aa25.01■■□□□ 1.59
HMGN1-219ENST00000491183 NBPF14Q5TI25 921 aa25.01■■□□□ 1.59
HMGN1-219ENST00000491183 PROM2Q8N271 834 aa25.01■■□□□ 1.59
HMGN1-219ENST00000491183 NSD3Q9BZ95 1437 aa25.01■■□□□ 1.59
HMGN1-219ENST00000491183 RTL1A6NKG5 1358 aa24.99■■□□□ 1.59
HMGN1-219ENST00000491183 ACSBG1Q96GR2 724 aa24.98■■□□□ 1.59
HMGN1-219ENST00000491183 POLR3GLQ9BT43 218 aa24.98■■□□□ 1.59
HMGN1-219ENST00000491183 HSP90AB2PQ58FF8 381 aa24.96■■□□□ 1.59
HMGN1-219ENST00000491183 NBPF6Q5VWK0 638 aa24.96■■□□□ 1.59
HMGN1-219ENST00000491183 NBPF4Q96M43 638 aa24.96■■□□□ 1.59
HMGN1-219ENST00000491183 NHSQ6T4R5 1651 aa24.96■■□□□ 1.59
HMGN1-219ENST00000491183 DDX54Q8TDD1 881 aaKnown RBP24.94■■□□□ 1.58
HMGN1-219ENST00000491183 TXNRD1Q16881 649 aa24.93■■□□□ 1.58
HMGN1-219ENST00000491183 ANO8Q9HCE9 1232 aaPredicted RBP24.93■■□□□ 1.58
HMGN1-219ENST00000491183 INSRP06213 1382 aa24.93■■□□□ 1.58
HMGN1-219ENST00000491183 EMILIN1Q9Y6C2 1016 aa24.92■■□□□ 1.58
HMGN1-219ENST00000491183 KAT6BQ8WYB5 2073 aa24.92■■□□□ 1.58
HMGN1-219ENST00000491183 KIF24Q5T7B8 1368 aa24.92■■□□□ 1.58
HMGN1-219ENST00000491183 USHBP1Q8N6Y0 703 aa24.91■■□□□ 1.58
HMGN1-219ENST00000491183 FLT4P35916 1363 aa24.91■■□□□ 1.58
HMGN1-219ENST00000491183 MEGF6O75095 1541 aa24.91■■□□□ 1.58
HMGN1-219ENST00000491183 CGNL1Q0VF96 1302 aa24.9■■□□□ 1.58
HMGN1-219ENST00000491183 ZCRB1Q8TBF4 217 aaKnown RBP24.89■■□□□ 1.58
HMGN1-219ENST00000491183 SHANK3Q9BYB0 1731 aa24.89■■□□□ 1.57
HMGN1-219ENST00000491183 BTAF1O14981 1849 aa24.89■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms