RNA–Protein interactions for RNA: ENST00000489207.1

ABCD4-213, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 379 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-213ENST00000489207 TRPM3Q9HCF6 1732 aaPredicted RBP11.13□□□□□ -0.63
ABCD4-213ENST00000489207 TNS3Q68CZ2 1445 aa11.13□□□□□ -0.63
ABCD4-213ENST00000489207 HOXC9P31274 260 aa11.13□□□□□ -0.63
ABCD4-213ENST00000489207 AMPHP49418 695 aa11.13□□□□□ -0.63
ABCD4-213ENST00000489207 EIF4A2Q14240 407 aaKnown RBP11.13□□□□□ -0.63
ABCD4-213ENST00000489207 HSP90AB2PQ58FF8 381 aa11.13□□□□□ -0.63
ABCD4-213ENST00000489207 WDR63Q8IWG1 891 aa11.13□□□□□ -0.63
ABCD4-213ENST00000489207 TRMT2AQ8IZ69 625 aaKnown RBP11.13□□□□□ -0.63
ABCD4-213ENST00000489207 CPDO75976 1380 aa11.13□□□□□ -0.63
ABCD4-213ENST00000489207 MAP2P11137 1827 aaKnown RBP11.12□□□□□ -0.63
ABCD4-213ENST00000489207 APAF1O14727 1248 aa11.12□□□□□ -0.63
ABCD4-213ENST00000489207 TCP11L2Q8N4U5 519 aa11.12□□□□□ -0.63
ABCD4-213ENST00000489207 RSPH6AQ9H0K4 717 aa11.12□□□□□ -0.63
ABCD4-213ENST00000489207 PPM1GO15355 546 aaPredicted RBP11.11□□□□□ -0.63
ABCD4-213ENST00000489207 KDRP35968 1356 aa11.11□□□□□ -0.63
ABCD4-213ENST00000489207 PLEKHG2Q9H7P9 1386 aa11.11□□□□□ -0.63
ABCD4-213ENST00000489207 IGSF1Q8N6C5 1336 aa11.1□□□□□ -0.63
ABCD4-213ENST00000489207 NFAT5O94916 1531 aa11.1□□□□□ -0.63
ABCD4-213ENST00000489207 PHRF1Q9P1Y6 1649 aaKnown RBP11.1□□□□□ -0.63
ABCD4-213ENST00000489207 WWC1Q8IX03 1113 aa11.1□□□□□ -0.63
ABCD4-213ENST00000489207 SHPRHQ149N8 1683 aa11.1□□□□□ -0.63
ABCD4-213ENST00000489207 ALS2Q96Q42 1657 aa11.1□□□□□ -0.63
ABCD4-213ENST00000489207 U2SURPO15042 1029 aaKnown RBP11.09□□□□□ -0.63
ABCD4-213ENST00000489207 NEFMP07197 916 aa11.09□□□□□ -0.63
ABCD4-213ENST00000489207 TMPOP42166 694 aaKnown RBP11.09□□□□□ -0.63
ABCD4-213ENST00000489207 XPCQ01831 940 aaPredicted RBP11.09□□□□□ -0.63
ABCD4-213ENST00000489207 NUTM2GQ5VZR2 741 aa11.09□□□□□ -0.63
ABCD4-213ENST00000489207 DDX17Q92841 729 aaKnown RBP11.09□□□□□ -0.63
ABCD4-213ENST00000489207 EYA1Q99502 592 aa11.09□□□□□ -0.63
ABCD4-213ENST00000489207 MARF1Q9Y4F3 1742 aaKnown RBP11.09□□□□□ -0.63
ABCD4-213ENST00000489207 ABCC6O95255 1503 aa11.09□□□□□ -0.63
ABCD4-213ENST00000489207 IL16Q14005 1332 aa11.09□□□□□ -0.63
ABCD4-213ENST00000489207 GOLGA2Q08379 1002 aa11.08□□□□□ -0.64
ABCD4-213ENST00000489207 NUTM2BA6NNL0 878 aaPredicted RBP11.07□□□□□ -0.64
ABCD4-213ENST00000489207 NUTM2EB1AL46 878 aaPredicted RBP11.07□□□□□ -0.64
ABCD4-213ENST00000489207 HTATSF1O43719 755 aaKnown RBP11.07□□□□□ -0.64
ABCD4-213ENST00000489207 RXRBP28702 533 aa11.07□□□□□ -0.64
ABCD4-213ENST00000489207 SLFN5Q08AF3 891 aa11.07□□□□□ -0.64
ABCD4-213ENST00000489207 MEX3CQ5U5Q3 659 aaKnown RBP11.07□□□□□ -0.64
ABCD4-213ENST00000489207 ZNF772Q68DY9 489 aaPredicted RBP11.07□□□□□ -0.64
ABCD4-213ENST00000489207 NUTM2AQ8IVF1 878 aaPredicted RBP11.07□□□□□ -0.64
ABCD4-213ENST00000489207 RGS12O14924 1447 aa11.07□□□□□ -0.64
ABCD4-213ENST00000489207 NCAPD2Q15021 1401 aa11.07□□□□□ -0.64
ABCD4-213ENST00000489207 SPATA31A6Q5VVP1 1343 aa11.07□□□□□ -0.64
ABCD4-213ENST00000489207 AHDC1Q5TGY3 1603 aaPredicted RBP11.06□□□□□ -0.64
ABCD4-213ENST00000489207 E9PSI1 815 aa11.06□□□□□ -0.64
ABCD4-213ENST00000489207 PRKAR2BP31323 418 aa11.06□□□□□ -0.64
ABCD4-213ENST00000489207 NFE2L2Q16236 605 aa11.06□□□□□ -0.64
ABCD4-213ENST00000489207 SULT6B1Q6IMI4 303 aa11.06□□□□□ -0.64
ABCD4-213ENST00000489207 LMOD2Q6P5Q4 547 aa11.06□□□□□ -0.64
ABCD4-213ENST00000489207 CCDC146Q8IYE0 955 aa11.06□□□□□ -0.64
ABCD4-213ENST00000489207 CALD1Q05682 793 aaKnown RBP11.05□□□□□ -0.64
ABCD4-213ENST00000489207 LMOD3Q0VAK6 560 aa11.05□□□□□ -0.64
ABCD4-213ENST00000489207 PHACTR3Q96KR7 559 aa11.05□□□□□ -0.64
ABCD4-213ENST00000489207 TRIM35Q9UPQ4 493 aa11.05□□□□□ -0.64
ABCD4-213ENST00000489207 AXIN2Q9Y2T1 843 aa11.05□□□□□ -0.64
ABCD4-213ENST00000489207 NHSL1Q5SYE7 1610 aa11.05□□□□□ -0.64
ABCD4-213ENST00000489207 AFF2P51816 1311 aa11.05□□□□□ -0.64
ABCD4-213ENST00000489207 MAPK8IP3Q9UPT6 1336 aa11.05□□□□□ -0.64
ABCD4-213ENST00000489207 PEAK1Q9H792 1746 aa11.04□□□□□ -0.64
ABCD4-213ENST00000489207 RIPK4P57078 832 aa11.04□□□□□ -0.64
ABCD4-213ENST00000489207 DUSP27Q5VZP5 1158 aa11.04□□□□□ -0.64
ABCD4-213ENST00000489207 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.04□□□□□ -0.64
ABCD4-213ENST00000489207 RNF123Q5XPI4 1314 aa11.04□□□□□ -0.64
ABCD4-213ENST00000489207 HMOX1P09601 288 aa11.03□□□□□ -0.64
ABCD4-213ENST00000489207 CT47B1P0C2W7 299 aaPredicted RBP11.03□□□□□ -0.64
ABCD4-213ENST00000489207 ZC3H6P61129 1189 aaKnown RBP11.03□□□□□ -0.64
ABCD4-213ENST00000489207 AMOTQ4VCS5 1084 aa11.03□□□□□ -0.64
ABCD4-213ENST00000489207 NBPF6Q5VWK0 638 aa11.03□□□□□ -0.64
ABCD4-213ENST00000489207 ANKRD24Q8TF21 1146 aa11.03□□□□□ -0.64
ABCD4-213ENST00000489207 NBPF4Q96M43 638 aa11.03□□□□□ -0.64
ABCD4-213ENST00000489207 RGPD1P0DJD0 1748 aa11.03□□□□□ -0.64
ABCD4-213ENST00000489207 ERBB3P21860 1342 aa11.03□□□□□ -0.64
ABCD4-213ENST00000489207 SOX12O15370 315 aa11.02□□□□□ -0.65
ABCD4-213ENST00000489207 GAS2L2Q8NHY3 880 aa11.02□□□□□ -0.65
ABCD4-213ENST00000489207 BABAM1Q9NWV8 329 aa11.02□□□□□ -0.65
ABCD4-213ENST00000489207 FAM83GA6ND36 823 aa11.01□□□□□ -0.65
ABCD4-213ENST00000489207 ZNF853P0CG23 659 aa11.01□□□□□ -0.65
ABCD4-213ENST00000489207 ERICH6BQ5W0A0 696 aa11.01□□□□□ -0.65
ABCD4-213ENST00000489207 CABLES1Q8TDN4 633 aa11.01□□□□□ -0.65
ABCD4-213ENST00000489207 CDCA7LQ96GN5 454 aa11.01□□□□□ -0.65
ABCD4-213ENST00000489207 AEBP1Q8IUX7 1158 aa11□□□□□ -0.65
ABCD4-213ENST00000489207 MYH16Q9H6N6 1097 aa11□□□□□ -0.65
ABCD4-213ENST00000489207 KIAA0232Q92628 1395 aa11□□□□□ -0.65
ABCD4-213ENST00000489207 EP400Q96L91 3159 aa10.99□□□□□ -0.65
ABCD4-213ENST00000489207 COL18A1P39060 1754 aa10.99□□□□□ -0.65
ABCD4-213ENST00000489207 MTHFSDQ2M296 383 aaKnown RBP10.99□□□□□ -0.65
ABCD4-213ENST00000489207 PLEKHO1Q53GL0 409 aaPredicted RBP10.99□□□□□ -0.65
ABCD4-213ENST00000489207 ZNF428Q96B54 188 aa10.99□□□□□ -0.65
ABCD4-213ENST00000489207 QTRT2Q9H974 415 aaKnown RBP10.99□□□□□ -0.65
ABCD4-213ENST00000489207 SALL2Q9Y467 1007 aaPredicted RBP10.99□□□□□ -0.65
ABCD4-213ENST00000489207 COL22A1Q8NFW1 1626 aaPredicted RBP10.98□□□□□ -0.65
ABCD4-213ENST00000489207 CRYBG1Q9Y4K1 1723 aa10.98□□□□□ -0.65
ABCD4-213ENST00000489207 CFAP44Q96MT7 982 aa10.98□□□□□ -0.65
ABCD4-213ENST00000489207 C8orf37Q96NL8 207 aa10.98□□□□□ -0.65
ABCD4-213ENST00000489207 CARD10Q9BWT7 1032 aa10.98□□□□□ -0.65
ABCD4-213ENST00000489207 SPINK5Q9NQ38 1064 aaPredicted RBP10.98□□□□□ -0.65
ABCD4-213ENST00000489207 PRDM11Q9NQV5 511 aa10.98□□□□□ -0.65
ABCD4-213ENST00000489207 IFT57Q9NWB7 429 aa10.98□□□□□ -0.65
ABCD4-213ENST00000489207 WDR17Q8IZU2 1322 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms