RNA–Protein interactions for RNA: ENST00000489081.5

CMSS1-205, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2 BASIC

Gene CMSS1, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-205ENST00000489081 IL13P35225 146 aa15.33■□□□□ 0.04
CMSS1-205ENST00000489081 PIP4K2BP78356 416 aa15.33■□□□□ 0.04
CMSS1-205ENST00000489081 HSP90AB2PQ58FF8 381 aa15.33■□□□□ 0.04
CMSS1-205ENST00000489081 ARHGEF25Q86VW2 580 aa15.33■□□□□ 0.04
CMSS1-205ENST00000489081 RTL1A6NKG5 1358 aa15.33■□□□□ 0.04
CMSS1-205ENST00000489081 PLEKHG5O94827 1062 aa15.32■□□□□ 0.04
CMSS1-205ENST00000489081 HOXC9P31274 260 aa15.32■□□□□ 0.04
CMSS1-205ENST00000489081 CABLES1Q8TDN4 633 aa15.32■□□□□ 0.04
CMSS1-205ENST00000489081 U2SURPO15042 1029 aaKnown RBP15.31■□□□□ 0.04
CMSS1-205ENST00000489081 U2AF1L5P0DN76 240 aaPredicted RBP15.31■□□□□ 0.04
CMSS1-205ENST00000489081 U2AF1Q01081 240 aaKnown RBP eCLIP15.31■□□□□ 0.04
CMSS1-205ENST00000489081 EIF4A2Q14240 407 aaKnown RBP15.31■□□□□ 0.04
CMSS1-205ENST00000489081 IP6K1Q92551 441 aa15.31■□□□□ 0.04
CMSS1-205ENST00000489081 LRRC59Q96AG4 307 aaKnown RBP15.31■□□□□ 0.04
CMSS1-205ENST00000489081 PHRF1Q9P1Y6 1649 aaKnown RBP15.29■□□□□ 0.04
CMSS1-205ENST00000489081 ZC3H6P61129 1189 aaKnown RBP15.29■□□□□ 0.04
CMSS1-205ENST00000489081 CRYBG1Q9Y4K1 1723 aa15.29■□□□□ 0.04
CMSS1-205ENST00000489081 CPDO75976 1380 aa15.27■□□□□ 0.04
CMSS1-205ENST00000489081 ZBTB7CA1YPR0 619 aa15.27■□□□□ 0.04
CMSS1-205ENST00000489081 CCDC146Q8IYE0 955 aa15.27■□□□□ 0.04
CMSS1-205ENST00000489081 COL16A1Q07092 1604 aaPredicted RBP15.27■□□□□ 0.03
CMSS1-205ENST00000489081 ZBED9Q6R2W3 1325 aa15.26■□□□□ 0.03
CMSS1-205ENST00000489081 FCHSD2O94868 740 aa15.26■□□□□ 0.03
CMSS1-205ENST00000489081 SLC4A2P04920 1241 aa15.26■□□□□ 0.03
CMSS1-205ENST00000489081 RUNDC1Q96C34 613 aa15.26■□□□□ 0.03
CMSS1-205ENST00000489081 PHLPP1O60346 1717 aa15.26■□□□□ 0.03
CMSS1-205ENST00000489081 PLEKHF1Q96S99 279 aa15.25■□□□□ 0.03
CMSS1-205ENST00000489081 RSPH6AQ9H0K4 717 aa15.25■□□□□ 0.03
CMSS1-205ENST00000489081 LTN1O94822 1766 aa15.25■□□□□ 0.03
CMSS1-205ENST00000489081 KIAA0232Q92628 1395 aa15.24■□□□□ 0.03
CMSS1-205ENST00000489081 APAF1O14727 1248 aa15.24■□□□□ 0.03
CMSS1-205ENST00000489081 HAP1P54257 671 aaPredicted RBP15.24■□□□□ 0.03
CMSS1-205ENST00000489081 EYA1Q99502 592 aa15.24■□□□□ 0.03
CMSS1-205ENST00000489081 PNNQ9H307 717 aaKnown RBP15.24■□□□□ 0.03
CMSS1-205ENST00000489081 ABCC6O95255 1503 aa15.23■□□□□ 0.03
CMSS1-205ENST00000489081 IGSF1Q8N6C5 1336 aa15.23■□□□□ 0.03
CMSS1-205ENST00000489081 SENP3-EIF4A1A0A087X0R7 540 aa15.23■□□□□ 0.03
CMSS1-205ENST00000489081 CENPBP07199 599 aaPredicted RBP15.23■□□□□ 0.03
CMSS1-205ENST00000489081 HMOX1P09601 288 aa15.23■□□□□ 0.03
CMSS1-205ENST00000489081 LTV1Q96GA3 475 aaPredicted RBP15.23■□□□□ 0.03
CMSS1-205ENST00000489081 AXIN2Q9Y2T1 843 aa15.23■□□□□ 0.03
CMSS1-205ENST00000489081 COL22A1Q8NFW1 1626 aaPredicted RBP15.23■□□□□ 0.03
CMSS1-205ENST00000489081 PRKAR2BP31323 418 aa15.22■□□□□ 0.03
CMSS1-205ENST00000489081 CHRNA2Q15822 529 aa15.22■□□□□ 0.03
CMSS1-205ENST00000489081 RGPD1P0DJD0 1748 aa15.22■□□□□ 0.03
CMSS1-205ENST00000489081 ABCA3Q99758 1704 aa15.22■□□□□ 0.03
CMSS1-205ENST00000489081 CACNB1Q02641 598 aaPredicted RBP15.21■□□□□ 0.03
CMSS1-205ENST00000489081 SULT6B1Q6IMI4 303 aa15.21■□□□□ 0.03
CMSS1-205ENST00000489081 AEBP1Q8IUX7 1158 aa15.21■□□□□ 0.03
CMSS1-205ENST00000489081 TCP11L2Q8N4U5 519 aa15.21■□□□□ 0.03
CMSS1-205ENST00000489081 ANKRD24Q8TF21 1146 aa15.21■□□□□ 0.03
CMSS1-205ENST00000489081 PRDM11Q9NQV5 511 aa15.21■□□□□ 0.03
CMSS1-205ENST00000489081 NGEFQ8N5V2 710 aa15.2■□□□□ 0.02
CMSS1-205ENST00000489081 SALL2Q9Y467 1007 aaPredicted RBP15.2■□□□□ 0.02
CMSS1-205ENST00000489081 COL18A1P39060 1754 aa15.2■□□□□ 0.02
CMSS1-205ENST00000489081 KDRP35968 1356 aa15.2■□□□□ 0.02
CMSS1-205ENST00000489081 ERBB3P21860 1342 aa15.19■□□□□ 0.02
CMSS1-205ENST00000489081 MAPK8IP3Q9UPT6 1336 aa15.19■□□□□ 0.02
CMSS1-205ENST00000489081 RNF39Q9H2S5 420 aa15.19■□□□□ 0.02
CMSS1-205ENST00000489081 NBPF6Q5VWK0 638 aa15.18■□□□□ 0.02
CMSS1-205ENST00000489081 NBPF4Q96M43 638 aa15.18■□□□□ 0.02
CMSS1-205ENST00000489081 JCADQ9P266 1359 aa15.17■□□□□ 0.02
CMSS1-205ENST00000489081 FAM83GA6ND36 823 aa15.17■□□□□ 0.02
CMSS1-205ENST00000489081 NEFMP07197 916 aa15.17■□□□□ 0.02
CMSS1-205ENST00000489081 TMPOP42166 694 aaKnown RBP15.17■□□□□ 0.02
CMSS1-205ENST00000489081 PHACTR3Q96KR7 559 aa15.17■□□□□ 0.02
CMSS1-205ENST00000489081 NCAPD2Q15021 1401 aa15.17■□□□□ 0.02
CMSS1-205ENST00000489081 ZNF521Q96K83 1311 aa15.17■□□□□ 0.02
CMSS1-205ENST00000489081 LMO7Q8WWI1 1683 aa15.16■□□□□ 0.02
CMSS1-205ENST00000489081 RRP7AQ9Y3A4 280 aaKnown RBP15.16■□□□□ 0.02
CMSS1-205ENST00000489081 CAMTA1Q9Y6Y1 1673 aa15.16■□□□□ 0.02
CMSS1-205ENST00000489081 HSPA1LP34931 641 aa15.15■□□□□ 0.02
CMSS1-205ENST00000489081 CCDC27Q2M243 656 aa15.15■□□□□ 0.02
CMSS1-205ENST00000489081 USHBP1Q8N6Y0 703 aa15.15■□□□□ 0.02
CMSS1-205ENST00000489081 PDE3BQ13370 1112 aa15.14■□□□□ 0.01
CMSS1-205ENST00000489081 NEUROD2Q15784 382 aa15.14■□□□□ 0.01
CMSS1-205ENST00000489081 NFE2L2Q16236 605 aa15.14■□□□□ 0.01
CMSS1-205ENST00000489081 COL5A2P05997 1499 aaPredicted RBP15.14■□□□□ 0.01
CMSS1-205ENST00000489081 CSB-PGBD3P0DP91 1061 aa15.13■□□□□ 0.01
CMSS1-205ENST00000489081 WWC1Q8IX03 1113 aa15.13■□□□□ 0.01
CMSS1-205ENST00000489081 RGPD5Q99666 1765 aa15.13■□□□□ 0.01
CMSS1-205ENST00000489081 WDR17Q8IZU2 1322 aa15.13■□□□□ 0.01
CMSS1-205ENST00000489081 NUTM2BA6NNL0 878 aaPredicted RBP15.12■□□□□ 0.01
CMSS1-205ENST00000489081 NUTM2EB1AL46 878 aaPredicted RBP15.12■□□□□ 0.01
CMSS1-205ENST00000489081 RIPK4P57078 832 aa15.12■□□□□ 0.01
CMSS1-205ENST00000489081 NUTM2AQ8IVF1 878 aaPredicted RBP15.12■□□□□ 0.01
CMSS1-205ENST00000489081 NLRP2Q9NX02 1062 aa15.12■□□□□ 0.01
CMSS1-205ENST00000489081 ADAMTS2O95450 1211 aa15.11■□□□□ 0.01
CMSS1-205ENST00000489081 TRIM35Q9UPQ4 493 aa15.11■□□□□ 0.01
CMSS1-205ENST00000489081 SPATA31A6Q5VVP1 1343 aa15.11■□□□□ 0.01
CMSS1-205ENST00000489081 COL14A1Q05707 1796 aaKnown RBP15.11■□□□□ 0.01
CMSS1-205ENST00000489081 GOLGA2Q08379 1002 aa15.1■□□□□ 0.01
CMSS1-205ENST00000489081 MTHFSDQ2M296 383 aaKnown RBP15.1■□□□□ 0.01
CMSS1-205ENST00000489081 CDCA7LQ96GN5 454 aa15.1■□□□□ 0.01
CMSS1-205ENST00000489081 BTG4Q9NY30 223 aa15.1■□□□□ 0.01
CMSS1-205ENST00000489081 FAM208AQ9UK61 1670 aaKnown RBP15.09■□□□□ 0.01
CMSS1-205ENST00000489081 RGPD2P0DJD1 1756 aa15.09■□□□□ 0.01
CMSS1-205ENST00000489081 EVA1CP58658 441 aa15.09■□□□□ 0.01
CMSS1-205ENST00000489081 WDR63Q8IWG1 891 aa15.09■□□□□ 0.01
CMSS1-205ENST00000489081 GAS2L2Q8NHY3 880 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms