RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 MON2Q7Z3U7 1717 aa36.92■■■■□ 3.5
RNF220-216ENST00000488865 DDB1Q16531 1140 aa36.89■■■■□ 3.5
RNF220-216ENST00000488865 NFAT5O94916 1531 aa36.89■■■■□ 3.5
RNF220-216ENST00000488865 OVOS2A0A0G2JMS6 1433 aa36.88■■■■□ 3.49
RNF220-216ENST00000488865 OVOS2A0A0J9YW53 1432 aa36.88■■■■□ 3.49
RNF220-216ENST00000488865 OVOS2Q6IE36 1432 aa36.88■■■■□ 3.49
RNF220-216ENST00000488865 SOX12O15370 315 aa36.88■■■■□ 3.49
RNF220-216ENST00000488865 RREB1Q92766 1687 aa36.88■■■■□ 3.49
RNF220-216ENST00000488865 LRRC37A3O60309 1634 aa36.88■■■■□ 3.49
RNF220-216ENST00000488865 CDCA7Q9BWT1 371 aaPredicted RBP36.87■■■■□ 3.49
RNF220-216ENST00000488865 PEAK1Q9H792 1746 aa36.86■■■■□ 3.49
RNF220-216ENST00000488865 USP31Q70CQ4 1352 aa36.85■■■■□ 3.49
RNF220-216ENST00000488865 CD163L1Q9NR16 1453 aa36.85■■■■□ 3.49
RNF220-216ENST00000488865 ABCC6O95255 1503 aa36.85■■■■□ 3.49
RNF220-216ENST00000488865 RGPD5Q99666 1765 aa36.84■■■■□ 3.49
RNF220-216ENST00000488865 CARD10Q9BWT7 1032 aa36.84■■■■□ 3.49
RNF220-216ENST00000488865 WNK3Q9BYP7 1800 aa36.83■■■■□ 3.49
RNF220-216ENST00000488865 SUGP2Q8IX01 1082 aaKnown RBP eCLIP36.82■■■■□ 3.48
RNF220-216ENST00000488865 PUS7Q96PZ0 661 aaKnown RBP36.82■■■■□ 3.48
RNF220-216ENST00000488865 USP54Q70EL1 1684 aa36.82■■■■□ 3.48
RNF220-216ENST00000488865 CSB-PGBD3P0DP91 1061 aa36.81■■■■□ 3.48
RNF220-216ENST00000488865 HDGFL2Q7Z4V5 671 aaPredicted RBP36.81■■■■□ 3.48
RNF220-216ENST00000488865 TMC1Q8TDI8 760 aa36.81■■■■□ 3.48
RNF220-216ENST00000488865 NUP188Q5SRE5 1749 aa36.8■■■■□ 3.48
RNF220-216ENST00000488865 NBPF14Q5TI25 921 aa36.79■■■■□ 3.48
RNF220-216ENST00000488865 SLC12A5Q9H2X9 1139 aa36.78■■■■□ 3.48
RNF220-216ENST00000488865 SBF2Q86WG5 1849 aa36.78■■■■□ 3.48
RNF220-216ENST00000488865 NME9Q86XW9 330 aa36.77■■■■□ 3.48
RNF220-216ENST00000488865 TERF2IPQ9NYB0 399 aa36.76■■■■□ 3.48
RNF220-216ENST00000488865 BCL9O00512 1426 aa36.76■■■■□ 3.47
RNF220-216ENST00000488865 EDC4Q6P2E9 1401 aaKnown RBP36.76■■■■□ 3.47
RNF220-216ENST00000488865 CCDC7Q96M83 1385 aa36.75■■■■□ 3.47
RNF220-216ENST00000488865 MARCH10Q8NA82 808 aaPredicted RBP36.74■■■■□ 3.47
RNF220-216ENST00000488865 PLSCR1O15162 318 aa36.73■■■■□ 3.47
RNF220-216ENST00000488865 BCL11BQ9C0K0 894 aaPredicted RBP36.73■■■■□ 3.47
RNF220-216ENST00000488865 RGPD3A6NKT7 1758 aaPredicted RBP36.73■■■■□ 3.47
RNF220-216ENST00000488865 RGPD4Q7Z3J3 1758 aa36.73■■■■□ 3.47
RNF220-216ENST00000488865 A0A1W2PP64 1363 aa36.7■■■■□ 3.47
RNF220-216ENST00000488865 EXOC5O00471 708 aa36.69■■■■□ 3.46
RNF220-216ENST00000488865 SLC24A1O60721 1099 aa36.69■■■■□ 3.46
RNF220-216ENST00000488865 TESK2Q96S53 571 aa36.69■■■■□ 3.46
RNF220-216ENST00000488865 NINLQ9Y2I6 1382 aa36.67■■■■□ 3.46
RNF220-216ENST00000488865 ERBB3P21860 1342 aa36.67■■■■□ 3.46
RNF220-216ENST00000488865 TRIM26Q12899 539 aaPredicted RBP36.67■■■■□ 3.46
RNF220-216ENST00000488865 LTN1O94822 1766 aa36.66■■■■□ 3.46
RNF220-216ENST00000488865 ST20-MTHFSA0A0A6YYL1 179 aa36.65■■■■□ 3.46
RNF220-216ENST00000488865 TNS2Q63HR2 1409 aa36.63■■■■□ 3.45
RNF220-216ENST00000488865 PTF1AQ7RTS3 328 aa36.63■■■■□ 3.45
RNF220-216ENST00000488865 NLRP2Q9NX02 1062 aa36.61■■■■□ 3.45
RNF220-216ENST00000488865 ANKRD24Q8TF21 1146 aa36.58■■■■□ 3.45
RNF220-216ENST00000488865 IL2RBP14784 551 aa36.55■■■■□ 3.44
RNF220-216ENST00000488865 PROM2Q8N271 834 aa36.54■■■■□ 3.44
RNF220-216ENST00000488865 IP6K1Q92551 441 aa36.53■■■■□ 3.44
RNF220-216ENST00000488865 SPON1Q9HCB6 807 aa36.52■■■■□ 3.44
RNF220-216ENST00000488865 KCNQ2O43526 872 aa36.5■■■■□ 3.43
RNF220-216ENST00000488865 COG3Q96JB2 828 aa36.5■■■■□ 3.43
RNF220-216ENST00000488865 ANO8Q9HCE9 1232 aaPredicted RBP36.5■■■■□ 3.43
RNF220-216ENST00000488865 ANKRD36BQ8N2N9 1353 aa36.48■■■■□ 3.43
RNF220-216ENST00000488865 NHSQ6T4R5 1651 aa36.48■■■■□ 3.43
RNF220-216ENST00000488865 TXNRD1Q16881 649 aa36.47■■■■□ 3.43
RNF220-216ENST00000488865 USP47Q96K76 1375 aa36.45■■■■□ 3.43
RNF220-216ENST00000488865 TMF1P82094 1093 aa36.45■■■■□ 3.43
RNF220-216ENST00000488865 FAM208AQ9UK61 1670 aaKnown RBP36.45■■■■□ 3.42
RNF220-216ENST00000488865 MAP3K19Q56UN5 1328 aa36.42■■■■□ 3.42
RNF220-216ENST00000488865 CASZ1Q86V15 1759 aa36.42■■■■□ 3.42
RNF220-216ENST00000488865 ACSBG1Q96GR2 724 aa36.41■■■■□ 3.42
RNF220-216ENST00000488865 PPP1R1BQ9UD71 204 aaPredicted RBP36.41■■■■□ 3.42
RNF220-216ENST00000488865 LTV1Q96GA3 475 aaPredicted RBP36.39■■■■□ 3.42
RNF220-216ENST00000488865 STK32BQ9NY57 414 aa36.39■■■■□ 3.42
RNF220-216ENST00000488865 HOXC9P31274 260 aa36.38■■■■□ 3.41
RNF220-216ENST00000488865 AMPHP49418 695 aa36.38■■■■□ 3.41
RNF220-216ENST00000488865 SLC15A2Q16348 729 aa36.36■■■■□ 3.41
RNF220-216ENST00000488865 CDCA8Q53HL2 280 aa36.36■■■■□ 3.41
RNF220-216ENST00000488865 FYB1O15117 783 aa36.34■■■■□ 3.41
RNF220-216ENST00000488865 FBLN1P23142 703 aa36.34■■■■□ 3.41
RNF220-216ENST00000488865 PDGFDQ9GZP0 370 aaPredicted RBP36.34■■■■□ 3.41
RNF220-216ENST00000488865 BTAF1O14981 1849 aa36.32■■■■□ 3.41
RNF220-216ENST00000488865 RTL1A6NKG5 1358 aa36.32■■■■□ 3.4
RNF220-216ENST00000488865 TIMELESSQ9UNS1 1208 aa36.32■■■■□ 3.4
RNF220-216ENST00000488865 DDX54Q8TDD1 881 aaKnown RBP36.3■■■■□ 3.4
RNF220-216ENST00000488865 GGNBP2Q9H3C7 697 aa36.29■■■■□ 3.4
RNF220-216ENST00000488865 KAT6BQ8WYB5 2073 aa36.29■■■■□ 3.4
RNF220-216ENST00000488865 ZBTB7AO95365 584 aa36.28■■■■□ 3.4
RNF220-216ENST00000488865 RRS1Q15050 365 aaKnown RBP36.26■■■■□ 3.4
RNF220-216ENST00000488865 RGPD2P0DJD1 1756 aa36.25■■■■□ 3.39
RNF220-216ENST00000488865 PAPPAQ13219 1627 aa36.24■■■■□ 3.39
RNF220-216ENST00000488865 PTGER2P43116 358 aa36.23■■■■□ 3.39
RNF220-216ENST00000488865 CLSPNQ9HAW4 1339 aa36.23■■■■□ 3.39
RNF220-216ENST00000488865 ZCRB1Q8TBF4 217 aaKnown RBP36.22■■■■□ 3.39
RNF220-216ENST00000488865 KIF20BQ96Q89 1820 aa36.21■■■■□ 3.39
RNF220-216ENST00000488865 ATF5Q9Y2D1 282 aaPredicted RBP36.21■■■■□ 3.39
RNF220-216ENST00000488865 DCAF8L1A6NGE4 600 aa36.2■■■■□ 3.39
RNF220-216ENST00000488865 MTFR1LQ9H019 292 aa36.2■■■■□ 3.39
RNF220-216ENST00000488865 MEGF6O75095 1541 aa36.19■■■■□ 3.38
RNF220-216ENST00000488865 SMG6Q86US8 1419 aaKnown RBP36.19■■■■□ 3.38
RNF220-216ENST00000488865 NBPF6Q5VWK0 638 aa36.19■■■■□ 3.38
RNF220-216ENST00000488865 NBPF4Q96M43 638 aa36.19■■■■□ 3.38
RNF220-216ENST00000488865 LRRC4BQ9NT99 713 aa36.19■■■■□ 3.38
RNF220-216ENST00000488865 KIF24Q5T7B8 1368 aa36.18■■■■□ 3.38
RNF220-216ENST00000488865 CGNL1Q0VF96 1302 aa36.18■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms