RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 C11orf95C9JLR9 678 aaPredicted RBP22.18■■□□□ 1.14
CTDSP1-209ENST00000488627 COL18A1P39060 1754 aa22.17■■□□□ 1.14
CTDSP1-209ENST00000488627 A0A0G2JS52 829 aa22.17■■□□□ 1.14
CTDSP1-209ENST00000488627 MYT1Q01538 1121 aa22.17■■□□□ 1.14
CTDSP1-209ENST00000488627 COG3Q96JB2 828 aa22.17■■□□□ 1.14
CTDSP1-209ENST00000488627 THRAP3Q9Y2W1 955 aaKnown RBP22.17■■□□□ 1.14
CTDSP1-209ENST00000488627 USP54Q70EL1 1684 aa22.17■■□□□ 1.14
CTDSP1-209ENST00000488627 CRB1P82279 1406 aa22.15■■□□□ 1.14
CTDSP1-209ENST00000488627 WDR17Q8IZU2 1322 aa22.15■■□□□ 1.14
CTDSP1-209ENST00000488627 FBLN1P23142 703 aa22.15■■□□□ 1.14
CTDSP1-209ENST00000488627 EP400Q96L91 3159 aa22.14■■□□□ 1.14
CTDSP1-209ENST00000488627 GGNBP2Q9H3C7 697 aa22.14■■□□□ 1.13
CTDSP1-209ENST00000488627 TOM1L2Q6ZVM7 507 aa22.13■■□□□ 1.13
CTDSP1-209ENST00000488627 THSD7AQ9UPZ6 1657 aa22.13■■□□□ 1.13
CTDSP1-209ENST00000488627 CCDC125Q86Z20 511 aa22.12■■□□□ 1.13
CTDSP1-209ENST00000488627 POLR3GLQ9BT43 218 aa22.12■■□□□ 1.13
CTDSP1-209ENST00000488627 FAM182BQ5T319 152 aa22.11■■□□□ 1.13
CTDSP1-209ENST00000488627 CARD10Q9BWT7 1032 aa22.11■■□□□ 1.13
CTDSP1-209ENST00000488627 MAP3K19Q56UN5 1328 aa22.1■■□□□ 1.13
CTDSP1-209ENST00000488627 IP6K1Q92551 441 aa22.1■■□□□ 1.13
CTDSP1-209ENST00000488627 NSD3Q9BZ95 1437 aa22.1■■□□□ 1.13
CTDSP1-209ENST00000488627 BRWD3Q6RI45 1802 aa22.1■■□□□ 1.13
CTDSP1-209ENST00000488627 MYOM1P52179 1685 aa22.1■■□□□ 1.13
CTDSP1-209ENST00000488627 ABCC6O95255 1503 aa22.1■■□□□ 1.13
CTDSP1-209ENST00000488627 ERBB3P21860 1342 aa22.09■■□□□ 1.13
CTDSP1-209ENST00000488627 CSB-PGBD3P0DP91 1061 aa22.08■■□□□ 1.13
CTDSP1-209ENST00000488627 PANK3Q9H999 370 aa22.07■■□□□ 1.12
CTDSP1-209ENST00000488627 BLMP54132 1417 aaPredicted RBP22.06■■□□□ 1.12
CTDSP1-209ENST00000488627 ANKRD24Q8TF21 1146 aa22.06■■□□□ 1.12
CTDSP1-209ENST00000488627 HOXC9P31274 260 aa22.05■■□□□ 1.12
CTDSP1-209ENST00000488627 RRS1Q15050 365 aaKnown RBP22.05■■□□□ 1.12
CTDSP1-209ENST00000488627 PDE3BQ13370 1112 aa22.04■■□□□ 1.12
CTDSP1-209ENST00000488627 CGNL1Q0VF96 1302 aa22.04■■□□□ 1.12
CTDSP1-209ENST00000488627 KIF7Q2M1P5 1343 aa22.04■■□□□ 1.12
CTDSP1-209ENST00000488627 AMPHP49418 695 aa22.03■■□□□ 1.12
CTDSP1-209ENST00000488627 FAM196AQ6ZSG2 479 aa22.03■■□□□ 1.12
CTDSP1-209ENST00000488627 CDCA7Q9BWT1 371 aaPredicted RBP22.02■■□□□ 1.12
CTDSP1-209ENST00000488627 NLRP2Q9NX02 1062 aa22.02■■□□□ 1.12
CTDSP1-209ENST00000488627 DISP2A7MBM2 1401 aa22.02■■□□□ 1.12
CTDSP1-209ENST00000488627 CCDC7Q96M83 1385 aa22.01■■□□□ 1.11
CTDSP1-209ENST00000488627 DEFB132Q7Z7B7 95 aa22.01■■□□□ 1.11
CTDSP1-209ENST00000488627 DDB1Q16531 1140 aa22■■□□□ 1.11
CTDSP1-209ENST00000488627 RGPD5Q99666 1765 aa21.99■■□□□ 1.11
CTDSP1-209ENST00000488627 LTV1Q96GA3 475 aaPredicted RBP21.99■■□□□ 1.11
CTDSP1-209ENST00000488627 RTL1A6NKG5 1358 aa21.98■■□□□ 1.11
CTDSP1-209ENST00000488627 SF3B2Q13435 895 aaKnown RBP21.97■■□□□ 1.11
CTDSP1-209ENST00000488627 LTN1O94822 1766 aa21.97■■□□□ 1.11
CTDSP1-209ENST00000488627 TRIM37O94972 964 aa21.96■■□□□ 1.11
CTDSP1-209ENST00000488627 HSP90AB2PQ58FF8 381 aa21.96■■□□□ 1.11
CTDSP1-209ENST00000488627 MARCH10Q8NA82 808 aaPredicted RBP21.96■■□□□ 1.11
CTDSP1-209ENST00000488627 EMILIN1Q9Y6C2 1016 aa21.96■■□□□ 1.11
CTDSP1-209ENST00000488627 EXOC5O00471 708 aa21.95■■□□□ 1.1
CTDSP1-209ENST00000488627 KIF24Q5T7B8 1368 aa21.95■■□□□ 1.1
CTDSP1-209ENST00000488627 PARP4Q9UKK3 1724 aaKnown RBP21.94■■□□□ 1.1
CTDSP1-209ENST00000488627 IL2RBP14784 551 aa21.94■■□□□ 1.1
CTDSP1-209ENST00000488627 INSRP06213 1382 aa21.93■■□□□ 1.1
CTDSP1-209ENST00000488627 WASHC2AQ641Q2 1341 aa21.93■■□□□ 1.1
CTDSP1-209ENST00000488627 POLKQ9UBT6 870 aa21.93■■□□□ 1.1
CTDSP1-209ENST00000488627 FLT4P35916 1363 aa21.92■■□□□ 1.1
CTDSP1-209ENST00000488627 PER1O15534 1290 aaPredicted RBP21.92■■□□□ 1.1
CTDSP1-209ENST00000488627 NBPF6Q5VWK0 638 aa21.92■■□□□ 1.1
CTDSP1-209ENST00000488627 NBPF4Q96M43 638 aa21.92■■□□□ 1.1
CTDSP1-209ENST00000488627 BAG6P46379 1132 aa21.91■■□□□ 1.1
CTDSP1-209ENST00000488627 AMER1Q5JTC6 1135 aaPredicted RBP21.91■■□□□ 1.1
CTDSP1-209ENST00000488627 KNSTRNQ9Y448 316 aa21.91■■□□□ 1.1
CTDSP1-209ENST00000488627 KIF20BQ96Q89 1820 aa21.91■■□□□ 1.1
CTDSP1-209ENST00000488627 EN1Q05925 392 aaPredicted RBP21.9■■□□□ 1.1
CTDSP1-209ENST00000488627 LRRC37A3O60309 1634 aa21.9■■□□□ 1.1
CTDSP1-209ENST00000488627 OVOS2A0A0G2JMS6 1433 aa21.89■■□□□ 1.1
CTDSP1-209ENST00000488627 BCL9O00512 1426 aa21.89■■□□□ 1.1
CTDSP1-209ENST00000488627 NSD2O96028 1365 aa21.89■■□□□ 1.1
CTDSP1-209ENST00000488627 TNNT2P45379 298 aaPredicted RBP21.88■■□□□ 1.09
CTDSP1-209ENST00000488627 PEAK1Q9H792 1746 aa21.88■■□□□ 1.09
CTDSP1-209ENST00000488627 TNS2Q63HR2 1409 aa21.88■■□□□ 1.09
CTDSP1-209ENST00000488627 PPM1GO15355 546 aaPredicted RBP21.87■■□□□ 1.09
CTDSP1-209ENST00000488627 APBA3O96018 575 aa21.87■■□□□ 1.09
CTDSP1-209ENST00000488627 PTF1AQ7RTS3 328 aa21.87■■□□□ 1.09
CTDSP1-209ENST00000488627 CAMKK2Q96RR4 588 aa21.87■■□□□ 1.09
CTDSP1-209ENST00000488627 MORC1Q86VD1 984 aa21.85■■□□□ 1.09
CTDSP1-209ENST00000488627 USHBP1Q8N6Y0 703 aa21.85■■□□□ 1.09
CTDSP1-209ENST00000488627 EZH2Q15910 746 aaKnown RBP21.84■■□□□ 1.09
CTDSP1-209ENST00000488627 BCL11BQ9C0K0 894 aaPredicted RBP21.84■■□□□ 1.09
CTDSP1-209ENST00000488627 WNK3Q9BYP7 1800 aa21.83■■□□□ 1.09
CTDSP1-209ENST00000488627 SMG6Q86US8 1419 aaKnown RBP21.83■■□□□ 1.09
CTDSP1-209ENST00000488627 MEGF6O75095 1541 aa21.81■■□□□ 1.08
CTDSP1-209ENST00000488627 FAM208AQ9UK61 1670 aaKnown RBP21.81■■□□□ 1.08
CTDSP1-209ENST00000488627 RGPD1P0DJD0 1748 aa21.8■■□□□ 1.08
CTDSP1-209ENST00000488627 ZCRB1Q8TBF4 217 aaKnown RBP21.8■■□□□ 1.08
CTDSP1-209ENST00000488627 DDX54Q8TDD1 881 aaKnown RBP21.8■■□□□ 1.08
CTDSP1-209ENST00000488627 EYA1Q99502 592 aa21.8■■□□□ 1.08
CTDSP1-209ENST00000488627 TNS1Q9HBL0 1735 aaKnown RBP21.8■■□□□ 1.08
CTDSP1-209ENST00000488627 KCNQ2O43526 872 aa21.79■■□□□ 1.08
CTDSP1-209ENST00000488627 EIF4A2Q14240 407 aaKnown RBP21.79■■□□□ 1.08
CTDSP1-209ENST00000488627 NCAPD2Q15021 1401 aa21.79■■□□□ 1.08
CTDSP1-209ENST00000488627 PLSCR1O15162 318 aa21.78■■□□□ 1.08
CTDSP1-209ENST00000488627 RAPGEF4Q8WZA2 1011 aa21.78■■□□□ 1.08
CTDSP1-209ENST00000488627 PARD3Q8TEW0 1356 aa21.77■■□□□ 1.08
CTDSP1-209ENST00000488627 ANKRD26Q9UPS8 1709 aa21.77■■□□□ 1.08
CTDSP1-209ENST00000488627 NPC1L1Q9UHC9 1359 aa21.76■■□□□ 1.07
CTDSP1-209ENST00000488627 TATP17735 454 aaPredicted RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms