RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 MIA2Q96PC5 1412 aa9.2□□□□□ -0.94
CDHR3-213ENST00000488386 CAMSAP1Q5T5Y3 1602 aa9.2□□□□□ -0.94
CDHR3-213ENST00000488386 CFHP08603 1231 aa9.19□□□□□ -0.94
CDHR3-213ENST00000488386 SSTR3P32745 418 aaPredicted RBP9.19□□□□□ -0.94
CDHR3-213ENST00000488386 APLP1P51693 650 aa9.19□□□□□ -0.94
CDHR3-213ENST00000488386 PPP4CP60510 307 aa9.19□□□□□ -0.94
CDHR3-213ENST00000488386 NEUROD2Q15784 382 aa9.19□□□□□ -0.94
CDHR3-213ENST00000488386 RSPH4AQ5TD94 716 aa9.19□□□□□ -0.94
CDHR3-213ENST00000488386 KDM4CQ9H3R0 1056 aa9.19□□□□□ -0.94
CDHR3-213ENST00000488386 CHIC2Q9UKJ5 165 aa9.19□□□□□ -0.94
CDHR3-213ENST00000488386 ABCC5O15440 1437 aa9.19□□□□□ -0.94
CDHR3-213ENST00000488386 CEP152O94986 1710 aa9.19□□□□□ -0.94
CDHR3-213ENST00000488386 FGD6Q6ZV73 1430 aa9.18□□□□□ -0.94
CDHR3-213ENST00000488386 SULF1Q8IWU6 871 aa9.18□□□□□ -0.94
CDHR3-213ENST00000488386 KDM5DQ9BY66 1539 aa9.18□□□□□ -0.94
CDHR3-213ENST00000488386 PLSCR2Q9NRY7 297 aa9.18□□□□□ -0.94
CDHR3-213ENST00000488386 RRP7BPQ9NSQ0 103 aa9.18□□□□□ -0.94
CDHR3-213ENST00000488386 CFAP65Q6ZU64 1925 aaKnown RBP9.17□□□□□ -0.94
CDHR3-213ENST00000488386 DNMT1P26358 1616 aaKnown RBP9.17□□□□□ -0.94
CDHR3-213ENST00000488386 MROH1Q8NDA8 1641 aa9.17□□□□□ -0.94
CDHR3-213ENST00000488386 CEP170BQ9Y4F5 1589 aaPredicted RBP9.17□□□□□ -0.94
CDHR3-213ENST00000488386 DAPK1P53355 1430 aa9.17□□□□□ -0.94
CDHR3-213ENST00000488386 NPATQ14207 1427 aa9.17□□□□□ -0.94
CDHR3-213ENST00000488386 WASHC2CQ9Y4E1 1318 aa9.17□□□□□ -0.94
CDHR3-213ENST00000488386 ZNF142P52746 1687 aaPredicted RBP9.16□□□□□ -0.94
CDHR3-213ENST00000488386 TCOF1Q13428 1488 aaKnown RBP9.16□□□□□ -0.94
CDHR3-213ENST00000488386 NCOA1Q15788 1441 aa9.16□□□□□ -0.94
CDHR3-213ENST00000488386 FAM50AQ14320 339 aaKnown RBP9.16□□□□□ -0.94
CDHR3-213ENST00000488386 RNF17Q9BXT8 1623 aaKnown RBP9.16□□□□□ -0.94
CDHR3-213ENST00000488386 ABCC3O15438 1527 aa9.15□□□□□ -0.94
CDHR3-213ENST00000488386 KIF15Q9NS87 1388 aa9.15□□□□□ -0.94
CDHR3-213ENST00000488386 GCGRP47871 477 aa9.15□□□□□ -0.94
CDHR3-213ENST00000488386 SLC4A3P48751 1232 aa9.15□□□□□ -0.94
CDHR3-213ENST00000488386 FBXO41Q8TF61 875 aa9.15□□□□□ -0.94
CDHR3-213ENST00000488386 HCSTQ9UBK5 93 aa9.15□□□□□ -0.94
CDHR3-213ENST00000488386 PZPP20742 1482 aa9.15□□□□□ -0.95
CDHR3-213ENST00000488386 TNRQ92752 1358 aa9.14□□□□□ -0.95
CDHR3-213ENST00000488386 EIF2AK4Q9P2K8 1649 aaKnown RBP9.14□□□□□ -0.95
CDHR3-213ENST00000488386 BEGAINQ9BUH8 593 aa9.14□□□□□ -0.95
CDHR3-213ENST00000488386 FAM117AQ9C073 453 aa9.14□□□□□ -0.95
CDHR3-213ENST00000488386 DUOX2Q9NRD8 1548 aa9.14□□□□□ -0.95
CDHR3-213ENST00000488386 SHANK2Q9UPX8 1470 aa9.14□□□□□ -0.95
CDHR3-213ENST00000488386 FUT2Q10981 343 aa9.12□□□□□ -0.95
CDHR3-213ENST00000488386 A2ML1A8K2U0 1454 aa9.12□□□□□ -0.95
CDHR3-213ENST00000488386 PTPRTO14522 1441 aa9.12□□□□□ -0.95
CDHR3-213ENST00000488386 ZNF335Q9H4Z2 1342 aaPredicted RBP9.11□□□□□ -0.95
CDHR3-213ENST00000488386 ZC3H13Q5T200 1668 aaKnown RBP9.11□□□□□ -0.95
CDHR3-213ENST00000488386 PLEKHG3A1L390 1219 aa9.11□□□□□ -0.95
CDHR3-213ENST00000488386 ACTN4O43707 911 aaKnown RBP9.11□□□□□ -0.95
CDHR3-213ENST00000488386 ITGAEP38570 1179 aa9.11□□□□□ -0.95
CDHR3-213ENST00000488386 KMT5BQ4FZB7 885 aa9.11□□□□□ -0.95
CDHR3-213ENST00000488386 HLA-CQ95604 372 aa9.11□□□□□ -0.95
CDHR3-213ENST00000488386 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.11□□□□□ -0.95
CDHR3-213ENST00000488386 ERVK-7P63135 1459 aa9.1□□□□□ -0.95
CDHR3-213ENST00000488386 LTBP4Q8N2S1 1624 aa9.1□□□□□ -0.95
CDHR3-213ENST00000488386 PUS10Q3MIT2 529 aaKnown RBP9.1□□□□□ -0.95
CDHR3-213ENST00000488386 NECTIN2Q92692 538 aa9.1□□□□□ -0.95
CDHR3-213ENST00000488386 ERBINQ96RT1 1412 aa9.1□□□□□ -0.95
CDHR3-213ENST00000488386 NEURL4Q96JN8 1562 aa9.1□□□□□ -0.95
CDHR3-213ENST00000488386 POLR1AO95602 1720 aaPredicted RBP9.1□□□□□ -0.95
CDHR3-213ENST00000488386 ANKRD30AQ9BXX3 1397 aa9.1□□□□□ -0.95
CDHR3-213ENST00000488386 PRDM15P57071 1507 aaPredicted RBP9.1□□□□□ -0.95
CDHR3-213ENST00000488386 PLA2R1Q13018 1463 aa9.09□□□□□ -0.95
CDHR3-213ENST00000488386 SPATA31D1Q6ZQQ2 1576 aa9.09□□□□□ -0.95
CDHR3-213ENST00000488386 NYAP1Q6ZVC0 841 aa9.09□□□□□ -0.95
CDHR3-213ENST00000488386 SPIRE2Q8WWL2 714 aa9.09□□□□□ -0.95
CDHR3-213ENST00000488386 FAM135AQ9P2D6 1515 aa9.09□□□□□ -0.95
CDHR3-213ENST00000488386 DEPDC5O75140 1603 aa9.09□□□□□ -0.95
CDHR3-213ENST00000488386 UGGT1Q9NYU2 1555 aa9.08□□□□□ -0.96
CDHR3-213ENST00000488386 KDM4AO75164 1064 aa9.08□□□□□ -0.96
CDHR3-213ENST00000488386 GUCA2AQ02747 115 aa9.08□□□□□ -0.96
CDHR3-213ENST00000488386 BLOC1S3Q6QNY0 202 aa9.08□□□□□ -0.96
CDHR3-213ENST00000488386 HOXA2O43364 376 aa9.07□□□□□ -0.96
CDHR3-213ENST00000488386 COPS2P61201 443 aa9.07□□□□□ -0.96
CDHR3-213ENST00000488386 MTRQ99707 1265 aa9.07□□□□□ -0.96
CDHR3-213ENST00000488386 PRR14Q9BWN1 585 aa9.07□□□□□ -0.96
CDHR3-213ENST00000488386 TBC1D2Q9BYX2 928 aa9.07□□□□□ -0.96
CDHR3-213ENST00000488386 PCDHB3Q9Y5E6 796 aa9.07□□□□□ -0.96
CDHR3-213ENST00000488386 ADGRL2O95490 1459 aa9.07□□□□□ -0.96
CDHR3-213ENST00000488386 UBR1Q8IWV7 1749 aa9.06□□□□□ -0.96
CDHR3-213ENST00000488386 TJAP1Q5JTD0 557 aa9.06□□□□□ -0.96
CDHR3-213ENST00000488386 NLRP1Q9C000 1473 aa9.06□□□□□ -0.96
CDHR3-213ENST00000488386 PIK3C2BO00750 1634 aa9.05□□□□□ -0.96
CDHR3-213ENST00000488386 VWDEQ8N2E2 1590 aa9.05□□□□□ -0.96
CDHR3-213ENST00000488386 MORN1Q5T089 497 aa9.05□□□□□ -0.96
CDHR3-213ENST00000488386 NUTM1Q86Y26 1132 aa9.05□□□□□ -0.96
CDHR3-213ENST00000488386 IL27Q8NEV9 243 aa9.05□□□□□ -0.96
CDHR3-213ENST00000488386 ZNF516Q92618 1163 aa9.05□□□□□ -0.96
CDHR3-213ENST00000488386 ANKRD50Q9ULJ7 1429 aa9.05□□□□□ -0.96
CDHR3-213ENST00000488386 SYNMO15061 1565 aa9.04□□□□□ -0.96
CDHR3-213ENST00000488386 KANK1Q14678 1352 aa9.04□□□□□ -0.96
CDHR3-213ENST00000488386 MOXD2PA6NHM9 499 aa9.04□□□□□ -0.96
CDHR3-213ENST00000488386 NDUFV2P19404 249 aa9.04□□□□□ -0.96
CDHR3-213ENST00000488386 ATP6V1AP38606 617 aa9.04□□□□□ -0.96
CDHR3-213ENST00000488386 MYSM1Q5VVJ2 828 aa9.04□□□□□ -0.96
CDHR3-213ENST00000488386 THEMISQ8N1K5 641 aaPredicted RBP9.04□□□□□ -0.96
CDHR3-213ENST00000488386 DDRGK1Q96HY6 314 aa9.04□□□□□ -0.96
CDHR3-213ENST00000488386 NPHP4O75161 1426 aaPredicted RBP9.04□□□□□ -0.96
CDHR3-213ENST00000488386 TLL1O43897 1013 aa9.03□□□□□ -0.96
CDHR3-213ENST00000488386 ANKLE2Q86XL3 938 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms