RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 RGPD5Q99666 1765 aa27.32■■□□□ 1.96
CD55-209ENST00000488171 EN1Q05925 392 aaPredicted RBP27.31■■□□□ 1.96
CD55-209ENST00000488171 HDGFL2Q7Z4V5 671 aaPredicted RBP27.3■■□□□ 1.96
CD55-209ENST00000488171 NME9Q86XW9 330 aa27.3■■□□□ 1.96
CD55-209ENST00000488171 WDR17Q8IZU2 1322 aa27.29■■□□□ 1.96
CD55-209ENST00000488171 A0A1W2PP64 1363 aa27.29■■□□□ 1.96
CD55-209ENST00000488171 TRIM37O94972 964 aa27.29■■□□□ 1.96
CD55-209ENST00000488171 SRCAPQ6ZRS2 3230 aa27.29■■□□□ 1.96
CD55-209ENST00000488171 EDC4Q6P2E9 1401 aaKnown RBP27.29■■□□□ 1.96
CD55-209ENST00000488171 TOM1L2Q6ZVM7 507 aa27.28■■□□□ 1.96
CD55-209ENST00000488171 LRRC37A3O60309 1634 aa27.27■■□□□ 1.96
CD55-209ENST00000488171 WNK3Q9BYP7 1800 aa27.27■■□□□ 1.96
CD55-209ENST00000488171 ABCC6O95255 1503 aa27.27■■□□□ 1.96
CD55-209ENST00000488171 TERF2IPQ9NYB0 399 aa27.26■■□□□ 1.95
CD55-209ENST00000488171 NINLQ9Y2I6 1382 aa27.23■■□□□ 1.95
CD55-209ENST00000488171 EZH2Q15910 746 aaKnown RBP27.22■■□□□ 1.95
CD55-209ENST00000488171 PEAK1Q9H792 1746 aa27.22■■□□□ 1.95
CD55-209ENST00000488171 USP47Q96K76 1375 aa27.22■■□□□ 1.95
CD55-209ENST00000488171 SLC24A1O60721 1099 aa27.22■■□□□ 1.95
CD55-209ENST00000488171 CAMKK2Q96RR4 588 aa27.22■■□□□ 1.95
CD55-209ENST00000488171 LTN1O94822 1766 aa27.21■■□□□ 1.95
CD55-209ENST00000488171 CARD10Q9BWT7 1032 aa27.21■■□□□ 1.95
CD55-209ENST00000488171 OVOS2A0A0J9YW53 1432 aa27.2■■□□□ 1.95
CD55-209ENST00000488171 OVOS2Q6IE36 1432 aa27.2■■□□□ 1.95
CD55-209ENST00000488171 APBA3O96018 575 aa27.2■■□□□ 1.94
CD55-209ENST00000488171 CSB-PGBD3P0DP91 1061 aa27.2■■□□□ 1.94
CD55-209ENST00000488171 DDB1Q16531 1140 aa27.19■■□□□ 1.94
CD55-209ENST00000488171 OVOS2A0A0G2JMS6 1433 aa27.18■■□□□ 1.94
CD55-209ENST00000488171 PSDA5PKW4 1024 aaPredicted RBP27.18■■□□□ 1.94
CD55-209ENST00000488171 PARD3Q8TEW0 1356 aa27.16■■□□□ 1.94
CD55-209ENST00000488171 CDCA7Q9BWT1 371 aaPredicted RBP27.16■■□□□ 1.94
CD55-209ENST00000488171 RREB1Q92766 1687 aa27.15■■□□□ 1.94
CD55-209ENST00000488171 CLSPNQ9HAW4 1339 aa27.15■■□□□ 1.94
CD55-209ENST00000488171 C11orf95C9JLR9 678 aaPredicted RBP27.15■■□□□ 1.94
CD55-209ENST00000488171 PCGF6Q9BYE7 350 aa27.15■■□□□ 1.94
CD55-209ENST00000488171 TIMELESSQ9UNS1 1208 aa27.15■■□□□ 1.94
CD55-209ENST00000488171 SBF2Q86WG5 1849 aa27.14■■□□□ 1.94
CD55-209ENST00000488171 ERBB3P21860 1342 aa27.14■■□□□ 1.94
CD55-209ENST00000488171 TMF1P82094 1093 aa27.14■■□□□ 1.94
CD55-209ENST00000488171 CCDC7Q96M83 1385 aa27.14■■□□□ 1.93
CD55-209ENST00000488171 ANKRD36BQ8N2N9 1353 aa27.13■■□□□ 1.93
CD55-209ENST00000488171 LRP5O75197 1615 aa27.12■■□□□ 1.93
CD55-209ENST00000488171 MARCH10Q8NA82 808 aaPredicted RBP27.11■■□□□ 1.93
CD55-209ENST00000488171 NUP188Q5SRE5 1749 aa27.11■■□□□ 1.93
CD55-209ENST00000488171 R3HDM1Q15032 1099 aaKnown RBP27.1■■□□□ 1.93
CD55-209ENST00000488171 BCL9O00512 1426 aa27.09■■□□□ 1.93
CD55-209ENST00000488171 ANKRD24Q8TF21 1146 aa27.08■■□□□ 1.93
CD55-209ENST00000488171 COG3Q96JB2 828 aa27.07■■□□□ 1.92
CD55-209ENST00000488171 NLRP2Q9NX02 1062 aa27.07■■□□□ 1.92
CD55-209ENST00000488171 TNS2Q63HR2 1409 aa27.06■■□□□ 1.92
CD55-209ENST00000488171 EXOC5O00471 708 aa27.06■■□□□ 1.92
CD55-209ENST00000488171 PTF1AQ7RTS3 328 aa27.06■■□□□ 1.92
CD55-209ENST00000488171 IP6K1Q92551 441 aa27.05■■□□□ 1.92
CD55-209ENST00000488171 RGPD3A6NKT7 1758 aaPredicted RBP27.04■■□□□ 1.92
CD55-209ENST00000488171 RGPD4Q7Z3J3 1758 aa27.04■■□□□ 1.92
CD55-209ENST00000488171 BCL11BQ9C0K0 894 aaPredicted RBP27.04■■□□□ 1.92
CD55-209ENST00000488171 FBLN1P23142 703 aa27.02■■□□□ 1.92
CD55-209ENST00000488171 CDCA8Q53HL2 280 aa27.02■■□□□ 1.92
CD55-209ENST00000488171 MYOM1P52179 1685 aa27.02■■□□□ 1.92
CD55-209ENST00000488171 MAP3K19Q56UN5 1328 aa27.02■■□□□ 1.92
CD55-209ENST00000488171 FYB1O15117 783 aa27.01■■□□□ 1.91
CD55-209ENST00000488171 FAM208AQ9UK61 1670 aaKnown RBP27.01■■□□□ 1.91
CD55-209ENST00000488171 PLSCR1O15162 318 aa27■■□□□ 1.91
CD55-209ENST00000488171 IL2RBP14784 551 aa27■■□□□ 1.91
CD55-209ENST00000488171 HOXC9P31274 260 aa26.98■■□□□ 1.91
CD55-209ENST00000488171 GGNBP2Q9H3C7 697 aa26.98■■□□□ 1.91
CD55-209ENST00000488171 NBPF14Q5TI25 921 aa26.97■■□□□ 1.91
CD55-209ENST00000488171 LTV1Q96GA3 475 aaPredicted RBP26.97■■□□□ 1.91
CD55-209ENST00000488171 KIF20BQ96Q89 1820 aa26.96■■□□□ 1.91
CD55-209ENST00000488171 AMPHP49418 695 aa26.95■■□□□ 1.9
CD55-209ENST00000488171 NHSQ6T4R5 1651 aa26.94■■□□□ 1.9
CD55-209ENST00000488171 CARD14Q9BXL6 1004 aa26.94■■□□□ 1.9
CD55-209ENST00000488171 RTL1A6NKG5 1358 aa26.93■■□□□ 1.9
CD55-209ENST00000488171 KCNQ2O43526 872 aa26.93■■□□□ 1.9
CD55-209ENST00000488171 RRS1Q15050 365 aaKnown RBP26.93■■□□□ 1.9
CD55-209ENST00000488171 PROM2Q8N271 834 aa26.93■■□□□ 1.9
CD55-209ENST00000488171 RGPD2P0DJD1 1756 aa26.92■■□□□ 1.9
CD55-209ENST00000488171 CCER1Q8TC90 406 aaPredicted RBP26.91■■□□□ 1.9
CD55-209ENST00000488171 ACSBG1Q96GR2 724 aa26.89■■□□□ 1.9
CD55-209ENST00000488171 ANO8Q9HCE9 1232 aaPredicted RBP26.89■■□□□ 1.9
CD55-209ENST00000488171 NSD3Q9BZ95 1437 aa26.89■■□□□ 1.9
CD55-209ENST00000488171 TXNRD1Q16881 649 aa26.85■■□□□ 1.89
CD55-209ENST00000488171 MEGF6O75095 1541 aa26.84■■□□□ 1.89
CD55-209ENST00000488171 NBPF6Q5VWK0 638 aa26.84■■□□□ 1.89
CD55-209ENST00000488171 NBPF4Q96M43 638 aa26.84■■□□□ 1.89
CD55-209ENST00000488171 BTAF1O14981 1849 aa26.83■■□□□ 1.89
CD55-209ENST00000488171 SHANK3Q9BYB0 1731 aa26.83■■□□□ 1.89
CD55-209ENST00000488171 DDX54Q8TDD1 881 aaKnown RBP26.83■■□□□ 1.88
CD55-209ENST00000488171 INSRP06213 1382 aa26.82■■□□□ 1.88
CD55-209ENST00000488171 HSPA5P11021 654 aaKnown RBP26.82■■□□□ 1.88
CD55-209ENST00000488171 EIF4G2P78344 907 aaKnown RBP eCLIP26.82■■□□□ 1.88
CD55-209ENST00000488171 HSP90AB2PQ58FF8 381 aa26.82■■□□□ 1.88
CD55-209ENST00000488171 FLT4P35916 1363 aa26.81■■□□□ 1.88
CD55-209ENST00000488171 KIF24Q5T7B8 1368 aa26.81■■□□□ 1.88
CD55-209ENST00000488171 CASZ1Q86V15 1759 aa26.81■■□□□ 1.88
CD55-209ENST00000488171 SMG6Q86US8 1419 aaKnown RBP26.8■■□□□ 1.88
CD55-209ENST00000488171 USHBP1Q8N6Y0 703 aa26.79■■□□□ 1.88
CD55-209ENST00000488171 ZCRB1Q8TBF4 217 aaKnown RBP26.78■■□□□ 1.88
CD55-209ENST00000488171 POLR3GLQ9BT43 218 aa26.78■■□□□ 1.88
CD55-209ENST00000488171 EMILIN1Q9Y6C2 1016 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms